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The map label for this gene is yoaJ [H]

Identifier: 108762346

GI number: 108762346

Start: 4168046

End: 4168747

Strand: Reverse

Name: yoaJ [H]

Synonym: MXAN_3573

Alternate gene names: 108762346

Gene position: 4168747-4168046 (Counterclockwise)

Preceding gene: 108763557

Following gene: 108762392

Centisome position: 45.61

GC content: 66.52

Gene sequence:

>702_bases
GTGGCCATGCACCCCCTTCGCTCGAAGTCCCGACGCTTCCTCCTCCCTGTCGCCGCGGTGTTCGTCGCCTGTGGCGGTTG
CAGTGACGACCCGTCTGGCGGCGGCGCGCCGCTGGGCGAGGAGCAACAGGGCATCGCCACCTTCTACAATGCCACCGGCT
CCGGCAATTGCAGCTACGAGCCAACAGGTGACTTGATGGTGGCCGCCATGAACACGCCCCAGTACGCCAACAGCGCGGCC
TGTGGACAGTGCGTGGACATCACCGGCCCCAAGGGCTCGGTCCGCGTGCGCATCGTGGACCGCTGCCCGGAGTGTGAATC
CGGCCACCTGGACCTGAGCCGGGAAGCCTTCGCCCGCATCGCGGAGATGCAGCAGGGCCGGGTCAACATCACCTGGACGC
CGGTGTCCTGCGACGTGGCGGGGAACATCGAGTACCACTTCAAGAACGGCAGCAATCCCTGGTGGACTGCCATCCAGGTC
CGCAACCACCGCCTGCCCATCCAGAAGCTGGAGTGGCGACGCGGCACCGGTGGATGGCAGGACGTCCCGCGCGAGAGCTA
CAACTACTTCGTCAACTTGAGTGGAATGGGCGACGGCCCCTTCTCCGTGCGCGTCACCGCCGTGGACGGCCAGCAACTGG
AAGACACGCTGGACAGAGTCCTCGACAACCGCAGTGCCGAGGGCTCTGGCCAGTTCCGCTAG

Upstream 100 bases:

>100_bases
CCGGGGCCGCTGACACCGGGGCGCAAGCCCGCACACACGTCGGGGTGGAGGGTGCCCGGGGGCCCTTCCACCCCGATGCC
GTTTTTGCGGGGTATGCTGA

Downstream 100 bases:

>100_bases
CGCGCGGCGCGCGGTTCAGCGCCGCAGCATGGAGCGCAACAGCTCCAGGGCCTCGGTGACGTTCTGCCAGACCTGGAGCG
ACTTCATGACGCCCTCGCCC

Product: putative lipoprotein

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAMHPLRSKSRRFLLPVAAVFVACGGCSDDPSGGGAPLGEEQQGIATFYNATGSGNCSYEPTGDLMVAAMNTPQYANSAA
CGQCVDITGPKGSVRVRIVDRCPECESGHLDLSREAFARIAEMQQGRVNITWTPVSCDVAGNIEYHFKNGSNPWWTAIQV
RNHRLPIQKLEWRRGTGGWQDVPRESYNYFVNLSGMGDGPFSVRVTAVDGQQLEDTLDRVLDNRSAEGSGQFR

Sequences:

>Translated_233_residues
MAMHPLRSKSRRFLLPVAAVFVACGGCSDDPSGGGAPLGEEQQGIATFYNATGSGNCSYEPTGDLMVAAMNTPQYANSAA
CGQCVDITGPKGSVRVRIVDRCPECESGHLDLSREAFARIAEMQQGRVNITWTPVSCDVAGNIEYHFKNGSNPWWTAIQV
RNHRLPIQKLEWRRGTGGWQDVPRESYNYFVNLSGMGDGPFSVRVTAVDGQQLEDTLDRVLDNRSAEGSGQFR
>Mature_232_residues
AMHPLRSKSRRFLLPVAAVFVACGGCSDDPSGGGAPLGEEQQGIATFYNATGSGNCSYEPTGDLMVAAMNTPQYANSAAC
GQCVDITGPKGSVRVRIVDRCPECESGHLDLSREAFARIAEMQQGRVNITWTPVSCDVAGNIEYHFKNGSNPWWTAIQVR
NHRLPIQKLEWRRGTGGWQDVPRESYNYFVNLSGMGDGPFSVRVTAVDGQQLEDTLDRVLDNRSAEGSGQFR

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 25393; Mature: 25261

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50842 EXPANSIN_EG45

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMHPLRSKSRRFLLPVAAVFVACGGCSDDPSGGGAPLGEEQQGIATFYNATGSGNCSYE
CCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PTGDLMVAAMNTPQYANSAACGQCVDITGPKGSVRVRIVDRCPECESGHLDLSREAFARI
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AEMQQGRVNITWTPVSCDVAGNIEYHFKNGSNPWWTAIQVRNHRLPIQKLEWRRGTGGWQ
HHHHCCEEEEEEEEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCHHHHCEECCCCCCC
DVPRESYNYFVNLSGMGDGPFSVRVTAVDGQQLEDTLDRVLDNRSAEGSGQFR
CCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AMHPLRSKSRRFLLPVAAVFVACGGCSDDPSGGGAPLGEEQQGIATFYNATGSGNCSYE
CCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PTGDLMVAAMNTPQYANSAACGQCVDITGPKGSVRVRIVDRCPECESGHLDLSREAFARI
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AEMQQGRVNITWTPVSCDVAGNIEYHFKNGSNPWWTAIQVRNHRLPIQKLEWRRGTGGWQ
HHHHCCEEEEEEEEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCHHHHCEECCCCCCC
DVPRESYNYFVNLSGMGDGPFSVRVTAVDGQQLEDTLDRVLDNRSAEGSGQFR
CCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]