| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762235
Identifier: 108762235
GI number: 108762235
Start: 5663238
End: 5664227
Strand: Direct
Name: 108762235
Synonym: MXAN_4542
Alternate gene names: NA
Gene position: 5663238-5664227 (Clockwise)
Preceding gene: 108758750
Following gene: 108757394
Centisome position: 61.96
GC content: 71.21
Gene sequence:
>990_bases ATGTCACGCCCCCTTCCCTCTGCGTCGAGGGACCGCAAGCGCCTCCGCGCCGCGGCCCTGCTGGCCGCCCTCTTGTCGCT GTCCGCCTGCGAGGGGCGTGAAACACCACCGGGGCCGAATGAACCATGTGTCGGGGCTGCCTGTGGACCGCTGCAACCGC CCGACACCGCGCTCGAAGGCAGTGTGCGCATCGCGACCTTCAACGTGCAGCGGCTCTTTGACACGGTGTGCGACTCCGAT GCGTGCGGCGGCAGCAACTATGAGGCGCTGCCCACTCCCTCCGAGTTCGGTCTCCAGGCGGACCGGCTCGCGTCCGCCAT CTCGCGACTGAACGCCGACGTGGTGCTGTTGGCCGAGGTGGAAACCCAGGCCTCGCTCGACGCGCTCACGTCACGGCTCC CCCGCTTCGGCTATTCGGAGCTGGGCGAGACGGGCGCCGCGGCGTCCGTGGACGTGGCCGTCCTCTCTGTTCACCCCATC ACCGACGTCCGCGGGCATCGGGAACGCACGCTGTGGCGCCCGGATGGCTCCGCCACCCGGTTCTCCCGCGAGTTGCTGGA GGTCCACCTGGACGTGGACGGGAAGAAGGTCATCGTCTTCTCCGCGCACTTCCGCTCCAAGTCCAATGACGACGCCGGGC GCCGCTTCGCCGAGGCCGTGGCGACGCGGGACATCGTCGCGGGCGCGGCCCAGGCGGCTCCAGACGCGCTCGTCGTCCTT GGCGGCGACCTCAACGACGTACCGGGCTCGGAGCCCATCACCGCGCTGGAGCGCGACGGCGCGCTGCTGCGCGTCTCCAG CGACCGGCCGGCCAGCGAGACGTGGACGTACACCTACCACGGCGACACCCAGGCCATTGACCACCTGTACCTGGCGCGCG GCGGGGGCACGTATGTGCCCGGCTCGTTCCGCGCGGCGAGGGACCCACGGGGCGGCTATGGCGGGTCGGACCACGCCGCC GTGTTCGCGGACTTCCTGCCCGCGCCCTGA
Upstream 100 bases:
>100_bases ACAGTAAGCAATGCGCGTGAGATTAGGACGCCTCCTAGCGACGGCAGCGTCCTGCCTGCCTGCCCGCGCCAGGGCCGCGA TGGGGTAGTCTCACGGCCCC
Downstream 100 bases:
>100_bases GGCCGGCTCAGGCCGTCGCGGGAATGGCCTGGATGTCGAGCTCGAGGTCGATCTTCTCGCTGACGAGCCAGCCGCCATTG TCGAGCGTCTTGTTCCAGCG
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSRPLPSASRDRKRLRAAALLAALLSLSACEGRETPPGPNEPCVGAACGPLQPPDTALEGSVRIATFNVQRLFDTVCDSD ACGGSNYEALPTPSEFGLQADRLASAISRLNADVVLLAEVETQASLDALTSRLPRFGYSELGETGAAASVDVAVLSVHPI TDVRGHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVL GGDLNDVPGSEPITALERDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTYVPGSFRAARDPRGGYGGSDHAA VFADFLPAP
Sequences:
>Translated_329_residues MSRPLPSASRDRKRLRAAALLAALLSLSACEGRETPPGPNEPCVGAACGPLQPPDTALEGSVRIATFNVQRLFDTVCDSD ACGGSNYEALPTPSEFGLQADRLASAISRLNADVVLLAEVETQASLDALTSRLPRFGYSELGETGAAASVDVAVLSVHPI TDVRGHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVL GGDLNDVPGSEPITALERDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTYVPGSFRAARDPRGGYGGSDHAA VFADFLPAP >Mature_328_residues SRPLPSASRDRKRLRAAALLAALLSLSACEGRETPPGPNEPCVGAACGPLQPPDTALEGSVRIATFNVQRLFDTVCDSDA CGGSNYEALPTPSEFGLQADRLASAISRLNADVVLLAEVETQASLDALTSRLPRFGYSELGETGAAASVDVAVLSVHPIT DVRGHRERTLWRPDGSATRFSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVLG GDLNDVPGSEPITALERDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTYVPGSFRAARDPRGGYGGSDHAAV FADFLPAP
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34763; Mature: 34632
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPLPSASRDRKRLRAAALLAALLSLSACEGRETPPGPNEPCVGAACGPLQPPDTALEG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SVRIATFNVQRLFDTVCDSDACGGSNYEALPTPSEFGLQADRLASAISRLNADVVLLAEV CEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEEC ETQASLDALTSRLPRFGYSELGETGAAASVDVAVLSVHPITDVRGHRERTLWRPDGSATR CHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCHHH FSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVL HHHHHHHEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GGDLNDVPGSEPITALERDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTYVP CCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCEEEEECCCCHHHHEEEEECCCCCCCC GSFRAARDPRGGYGGSDHAAVFADFLPAP CCCCCCCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SRPLPSASRDRKRLRAAALLAALLSLSACEGRETPPGPNEPCVGAACGPLQPPDTALEG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SVRIATFNVQRLFDTVCDSDACGGSNYEALPTPSEFGLQADRLASAISRLNADVVLLAEV CEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEEEEEC ETQASLDALTSRLPRFGYSELGETGAAASVDVAVLSVHPITDVRGHRERTLWRPDGSATR CHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCHHH FSRELLEVHLDVDGKKVIVFSAHFRSKSNDDAGRRFAEAVATRDIVAGAAQAAPDALVVL HHHHHHHEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GGDLNDVPGSEPITALERDGALLRVSSDRPASETWTYTYHGDTQAIDHLYLARGGGTYVP CCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCEEEEECCCCHHHHEEEEECCCCCCCC GSFRAARDPRGGYGGSDHAAVFADFLPAP CCCCCCCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA