Click here to switch to the map view.

The map label for this gene is comM [H]

Identifier: 108761864

GI number: 108761864

Start: 1701977

End: 1703620

Strand: Reverse

Name: comM [H]

Synonym: MXAN_1443

Alternate gene names: 108761864

Gene position: 1703620-1701977 (Counterclockwise)

Preceding gene: 108757589

Following gene: 108762868

Centisome position: 18.64

GC content: 67.58

Gene sequence:

>1644_bases
ATGTTGGCGAGGGTGCGGTCGGGGGCGTTGATGGGTATCGACGTGGTGGTGGTGGAGTGTGAGGTCGACATGGCGCTCGG
CCTCCCCTACTTCAACGTCGTGGGGCAGGCGGAGGGCGCGGTCCGGGAATCGAAAGTCCGCGTCATCTCCGCGCTGAAGA
ACACGGGCTTCGAGCTTCCCCAGAAGCGAATCACCGTGAATCTGGCGCCCGCGGATTTGAAGAAGGAAGGCGCGGCGTTC
GAACTGCCGATTGCATTGGGCGTCCTAGCGGCGGCGAAGTTGATGGATGAAGCCCCGCTGGAACGGCTTCTCTTCGGAGG
CGAGCTGTCCCTGGACGGCACACTCCGCCCCATCAAAGGAGTGCTTCCGTTGGCGGTGGCGGCGCTCAACGGCGGCTTCG
AAGGTGTCATGGTGCCTTGGGCCAATGCCGCGGAGGCAGCGCTCGTCGAAGAACTGCGCGTCATTCCCGTGAAGACCCTG
CGGGAGGCGGTGGACCACCTGACGGGGGCCCGCAGCATCCCGCCGTACACGCGGCAGCGGGAACCCCGTCTTCTGGCGCC
CACGGGACAGGCGCCTGACATGTCCGATGTCCGCGGGCAGGCCGACCTGAAGCTCGCCCTCGAAATCGCCGCGGCGGGGG
GCCACAACGTCTTGATGTCCGGGCCACCGGGCTCGGGGAAGACGATGCTGGCGCGGCGCCTGCCCGGCATCCTTCCGGAG
ATGACGTTCACCGAGGCCATGGAGGTGACGAAGGTCTACTCGGTGCTGGGCTTGCTGGGCGAAGGCCACGCATTGATGCG
CGAGCGCCCGTTCCGCGCGCCCCACCACACCCTCTCCGACGCGGGCCTGGTTGGCGGCGGCCTCTCGGCGAGGCCTGGCG
AACTCTCGTTGGCGCACAATGGCGTGCTCTTCCTCGACGAGCTTCCGGAGTTCCGGAGGAACGTGCTGGAGGTTCTGCGC
CAGCCCATGGAGGAAGGCGTCATCCACCTGGCACGCGCCAACCAGAACATCACCTATCCCTGCCGGGTCATGTTGGTGGC
CGCGATGAACCCCTGTCCCTGCGGTTACTACAACGTCCCCAGCCGCTCCTGCACTTGCGGCGAGCAGCGCGTCTTCGACT
ACATGACGCGCGTGAGCGGGCCCCTGTTGGACCGCATCGACATCAGCCTGCAGACGCGCCCGGTGGAGTATCACCACATG
GCCCGCTCGACGGTCCAAGAGCCCTCGAGCCGCTACTACCGCGAGCGGGCCCAGGTCGCGCGCGAGCGTCAACGCGCCCG
CTATCGCGATGAGCCGGGAATCCACTGCAACGCGCAGCTTCCCGCGCACCTGCTGCGCCGGTACTGCGCCATGAGCGAAC
GGGCCGAGCACATGCTGCAGCAAGCGGTGCGGATGTTCGGCCTGTCCGCGCGAGCCCATGACCGCATCATGAAACTGGCG
CTCACACGGGCAGACCTCGAGGGACGCGACCGCATCGAGCAGACCGACATGCAGCTCGCCATCAACTGCCGCATGCTGGA
CCGGCGAGGGGCGATGCAAGGCAAGCTTCACGGAGCCCGCCCTGCCCCTCCGCCCGAGGACGCCGCTTGGCGGAACACCG
GGCCCTCCGGCAGGGCCAGCCCGCTGGAGGACCTGGATGGTTGA

Upstream 100 bases:

>100_bases
ATCCGCCGGCGCGGATTGGCGAGCGCGGGCCTACGCCTGGGGTGGGCCCCGGTACGTGCATTGCTCAAGGACTTCGGGCG
GCACGGCGAGAGGACGGGAC

Downstream 100 bases:

>100_bases
GGGCTGCCGCGCGCGTCAGTGCGTCCCGGTCGTCGCGGACTCCGCGTGAGACGTCGTCGTCTGGAAGCGGGGCTCTGCGA
TGGACGGGGTCTGCCCACCC

Product: Mg-chelatase subunits D/I family, ComM subfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MLARVRSGALMGIDVVVVECEVDMALGLPYFNVVGQAEGAVRESKVRVISALKNTGFELPQKRITVNLAPADLKKEGAAF
ELPIALGVLAAAKLMDEAPLERLLFGGELSLDGTLRPIKGVLPLAVAALNGGFEGVMVPWANAAEAALVEELRVIPVKTL
REAVDHLTGARSIPPYTRQREPRLLAPTGQAPDMSDVRGQADLKLALEIAAAGGHNVLMSGPPGSGKTMLARRLPGILPE
MTFTEAMEVTKVYSVLGLLGEGHALMRERPFRAPHHTLSDAGLVGGGLSARPGELSLAHNGVLFLDELPEFRRNVLEVLR
QPMEEGVIHLARANQNITYPCRVMLVAAMNPCPCGYYNVPSRSCTCGEQRVFDYMTRVSGPLLDRIDISLQTRPVEYHHM
ARSTVQEPSSRYYRERAQVARERQRARYRDEPGIHCNAQLPAHLLRRYCAMSERAEHMLQQAVRMFGLSARAHDRIMKLA
LTRADLEGRDRIEQTDMQLAINCRMLDRRGAMQGKLHGARPAPPPEDAAWRNTGPSGRASPLEDLDG

Sequences:

>Translated_547_residues
MLARVRSGALMGIDVVVVECEVDMALGLPYFNVVGQAEGAVRESKVRVISALKNTGFELPQKRITVNLAPADLKKEGAAF
ELPIALGVLAAAKLMDEAPLERLLFGGELSLDGTLRPIKGVLPLAVAALNGGFEGVMVPWANAAEAALVEELRVIPVKTL
REAVDHLTGARSIPPYTRQREPRLLAPTGQAPDMSDVRGQADLKLALEIAAAGGHNVLMSGPPGSGKTMLARRLPGILPE
MTFTEAMEVTKVYSVLGLLGEGHALMRERPFRAPHHTLSDAGLVGGGLSARPGELSLAHNGVLFLDELPEFRRNVLEVLR
QPMEEGVIHLARANQNITYPCRVMLVAAMNPCPCGYYNVPSRSCTCGEQRVFDYMTRVSGPLLDRIDISLQTRPVEYHHM
ARSTVQEPSSRYYRERAQVARERQRARYRDEPGIHCNAQLPAHLLRRYCAMSERAEHMLQQAVRMFGLSARAHDRIMKLA
LTRADLEGRDRIEQTDMQLAINCRMLDRRGAMQGKLHGARPAPPPEDAAWRNTGPSGRASPLEDLDG
>Mature_547_residues
MLARVRSGALMGIDVVVVECEVDMALGLPYFNVVGQAEGAVRESKVRVISALKNTGFELPQKRITVNLAPADLKKEGAAF
ELPIALGVLAAAKLMDEAPLERLLFGGELSLDGTLRPIKGVLPLAVAALNGGFEGVMVPWANAAEAALVEELRVIPVKTL
REAVDHLTGARSIPPYTRQREPRLLAPTGQAPDMSDVRGQADLKLALEIAAAGGHNVLMSGPPGSGKTMLARRLPGILPE
MTFTEAMEVTKVYSVLGLLGEGHALMRERPFRAPHHTLSDAGLVGGGLSARPGELSLAHNGVLFLDELPEFRRNVLEVLR
QPMEEGVIHLARANQNITYPCRVMLVAAMNPCPCGYYNVPSRSCTCGEQRVFDYMTRVSGPLLDRIDISLQTRPVEYHHM
ARSTVQEPSSRYYRERAQVARERQRARYRDEPGIHCNAQLPAHLLRRYCAMSERAEHMLQQAVRMFGLSARAHDRIMKLA
LTRADLEGRDRIEQTDMQLAINCRMLDRRGAMQGKLHGARPAPPPEDAAWRNTGPSGRASPLEDLDG

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=507, Percent_Identity=39.8422090729783, Blast_Score=347, Evalue=9e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 59939; Mature: 59939

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARVRSGALMGIDVVVVECEVDMALGLPYFNVVGQAEGAVRESKVRVISALKNTGFELP
CCCCCCCCCEEEEEEEEEEEEEHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
QKRITVNLAPADLKKEGAAFELPIALGVLAAAKLMDEAPLERLLFGGELSLDGTLRPIKG
CCEEEEEECCCCHHHCCCEEECHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHH
VLPLAVAALNGGFEGVMVPWANAAEAALVEELRVIPVKTLREAVDHLTGARSIPPYTRQR
HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
EPRLLAPTGQAPDMSDVRGQADLKLALEIAAAGGHNVLMSGPPGSGKTMLARRLPGILPE
CCEEECCCCCCCCHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCC
MTFTEAMEVTKVYSVLGLLGEGHALMRERPFRAPHHTLSDAGLVGGGLSARPGELSLAHN
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
GVLFLDELPEFRRNVLEVLRQPMEEGVIHLARANQNITYPCRVMLVAAMNPCPCGYYNVP
CEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHEEEECCCCCCCCCCCCC
SRSCTCGEQRVFDYMTRVSGPLLDRIDISLQTRPVEYHHMARSTVQEPSSRYYRERAQVA
CCCCCCHHHHHHHHHHHHCCCCHHHEECEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHH
RERQRARYRDEPGIHCNAQLPAHLLRRYCAMSERAEHMLQQAVRMFGLSARAHDRIMKLA
HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTRADLEGRDRIEQTDMQLAINCRMLDRRGAMQGKLHGARPAPPPEDAAWRNTGPSGRAS
HHHCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLEDLDG
CHHHCCC
>Mature Secondary Structure
MLARVRSGALMGIDVVVVECEVDMALGLPYFNVVGQAEGAVRESKVRVISALKNTGFELP
CCCCCCCCCEEEEEEEEEEEEEHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
QKRITVNLAPADLKKEGAAFELPIALGVLAAAKLMDEAPLERLLFGGELSLDGTLRPIKG
CCEEEEEECCCCHHHCCCEEECHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHH
VLPLAVAALNGGFEGVMVPWANAAEAALVEELRVIPVKTLREAVDHLTGARSIPPYTRQR
HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
EPRLLAPTGQAPDMSDVRGQADLKLALEIAAAGGHNVLMSGPPGSGKTMLARRLPGILPE
CCEEECCCCCCCCHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCC
MTFTEAMEVTKVYSVLGLLGEGHALMRERPFRAPHHTLSDAGLVGGGLSARPGELSLAHN
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
GVLFLDELPEFRRNVLEVLRQPMEEGVIHLARANQNITYPCRVMLVAAMNPCPCGYYNVP
CEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHEEEECCCCCCCCCCCCC
SRSCTCGEQRVFDYMTRVSGPLLDRIDISLQTRPVEYHHMARSTVQEPSSRYYRERAQVA
CCCCCCHHHHHHHHHHHHCCCCHHHEECEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHH
RERQRARYRDEPGIHCNAQLPAHLLRRYCAMSERAEHMLQQAVRMFGLSARAHDRIMKLA
HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTRADLEGRDRIEQTDMQLAINCRMLDRRGAMQGKLHGARPAPPPEDAAWRNTGPSGRAS
HHHCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLEDLDG
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]