Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
---|---|
Accession | NC_008095 |
Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108761561
Identifier: 108761561
GI number: 108761561
Start: 4368352
End: 4369071
Strand: Reverse
Name: 108761561
Synonym: MXAN_3658
Alternate gene names: NA
Gene position: 4369071-4368352 (Counterclockwise)
Preceding gene: 108759706
Following gene: 108761464
Centisome position: 47.8
GC content: 70.28
Gene sequence:
>720_bases TTGAAGCGTGAGCCCGTCACCGACCGCCTGGACCGTGTCCTGGGCCTCCTCGCCTCCCGGCCGTCCTGGACAGCCCCGGA GCTGGCGGAGGAGCTCCGCGTCTGCGTGCGTACCGTTCGACGGGATTTGTCCCGGCTTTCCGCCCGCGGCGTCCCCATCG AGTCGGACGCAGGCCGAGGCGGCGGCATTCGGGTACCGCCCCGAACGGGGCTCGGGCGCGTGCAGCTCAGCGCCCAGGAG CTGCTTGACCTCCTGCTCGCCCTGGCGCTCGCCGAGCGACTCGAGTCTCCGCTCCTGCTCTCGACACTCAAGAGCCTGCG TCAAAAGCTCGCCGCCTCGTTCCCACCGGAGGAGCGCGCACGCGTCGGCAAGCTGCGCCGTCGCATCCTCGTCGGCCCCA CTTCACGGAACGTCACCGCGACCTGGAAGCCTCCCCGAGCGGCGGTGCTACGTCCCCTCCAGGAGTCCTTCTTCGAGCAG CACGCCCTGGAGCTGACGTACCGCTCGAACGACGTGCGCACGGTGCGCATCGTGGAGCCGCACTACCTGCTGCTGAGCTG GCCCGCGTGGTACCTGCTCGTCTGGGACCACCTGCGCGGAGCGGTGCGCATGCTCCGCGTCGACCGCATCGAATCCGCGA GCGTCCAGGCGGCGACGTTCCAGGTGCGGGACTCGAAGTCGATGCTCGCCACCCTCGGCGACATCTTCGCGGCGCTCTGA
Upstream 100 bases:
>100_bases ACAATCCGCGCAAGGTGTTCATGGGGCTCTCTCGTGTCCTGGCCGCGCCCGTTCGCGACCCCATGACCATGGCCCCAGAA CATGACAGAATGAGTCACGT
Downstream 100 bases:
>100_bases TGCCCCCTGTGTCAGGAAGGTTGCCGCCTCGGCTGACCGGCCGGGCCGTGTTGTCGCCTCCCGAGACGGAGAGGCCGAGC TTGGGCCGCGATCAGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: DeoR Family Transcriptional Regulator; Transcriptional Regulator
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKREPVTDRLDRVLGLLASRPSWTAPELAEELRVCVRTVRRDLSRLSARGVPIESDAGRGGGIRVPPRTGLGRVQLSAQE LLDLLLALALAERLESPLLLSTLKSLRQKLAASFPPEERARVGKLRRRILVGPTSRNVTATWKPPRAAVLRPLQESFFEQ HALELTYRSNDVRTVRIVEPHYLLLSWPAWYLLVWDHLRGAVRMLRVDRIESASVQAATFQVRDSKSMLATLGDIFAAL
Sequences:
>Translated_239_residues MKREPVTDRLDRVLGLLASRPSWTAPELAEELRVCVRTVRRDLSRLSARGVPIESDAGRGGGIRVPPRTGLGRVQLSAQE LLDLLLALALAERLESPLLLSTLKSLRQKLAASFPPEERARVGKLRRRILVGPTSRNVTATWKPPRAAVLRPLQESFFEQ HALELTYRSNDVRTVRIVEPHYLLLSWPAWYLLVWDHLRGAVRMLRVDRIESASVQAATFQVRDSKSMLATLGDIFAAL >Mature_239_residues MKREPVTDRLDRVLGLLASRPSWTAPELAEELRVCVRTVRRDLSRLSARGVPIESDAGRGGGIRVPPRTGLGRVQLSAQE LLDLLLALALAERLESPLLLSTLKSLRQKLAASFPPEERARVGKLRRRILVGPTSRNVTATWKPPRAAVLRPLQESFFEQ HALELTYRSNDVRTVRIVEPHYLLLSWPAWYLLVWDHLRGAVRMLRVDRIESASVQAATFQVRDSKSMLATLGDIFAAL
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26879; Mature: 26879
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: PS51000 HTH_DEOR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREPVTDRLDRVLGLLASRPSWTAPELAEELRVCVRTVRRDLSRLSARGVPIESDAGRG CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GGIRVPPRTGLGRVQLSAQELLDLLLALALAERLESPLLLSTLKSLRQKLAASFPPEERA CCEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH RVGKLRRRILVGPTSRNVTATWKPPRAAVLRPLQESFFEQHALELTYRSNDVRTVRIVEP HHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECC HYLLLSWPAWYLLVWDHLRGAVRMLRVDRIESASVQAATFQVRDSKSMLATLGDIFAAL CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MKREPVTDRLDRVLGLLASRPSWTAPELAEELRVCVRTVRRDLSRLSARGVPIESDAGRG CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GGIRVPPRTGLGRVQLSAQELLDLLLALALAERLESPLLLSTLKSLRQKLAASFPPEERA CCEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHH RVGKLRRRILVGPTSRNVTATWKPPRAAVLRPLQESFFEQHALELTYRSNDVRTVRIVEP HHHHHHHHHEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECC HYLLLSWPAWYLLVWDHLRGAVRMLRVDRIESASVQAATFQVRDSKSMLATLGDIFAAL CEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA