| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761478
Identifier: 108761478
GI number: 108761478
Start: 5575598
End: 5578018
Strand: Direct
Name: 108761478
Synonym: MXAN_4505
Alternate gene names: NA
Gene position: 5575598-5578018 (Clockwise)
Preceding gene: 108763644
Following gene: 108760933
Centisome position: 61.0
GC content: 72.33
Gene sequence:
>2421_bases ATGGACGCCAACCGCCTCCGGTTCTACATGCTGGCGGATGCGCCGGACTGGGTCACGGAGAGCTCGGTCTCCGCGGGCGA GGTGTGTCTCTACGACGCGAAGCGCAGGACGCTCCGGCTGGGAAGCCTGGGAGAGAGCCGCACCTTCGATGAAGCACTCG ACCTCGCGGTGCTGGAGCCCAGGCTCGCTCGCGTACCGGGCGCGGTGGATGCTTTCGGCACGTGGGCCTGGTGGGACGAC GTGGCCGGGCAGGTGCGCGCGGCGGGCGGAGGCGCTGGCACCACCCTGCGATTCGAGCCCGCCCAGGTAGGGCTGTCCGG CGCGGTGACGGACCTGTCGCCTGGAGCTGGCGGCATCCTCTACGTCGCGGTGGCCCAGCGCGTAGTGGCGCTCCACCTGC GTAAGGTGTGGTCCGCCGTGGTGTTCCCGGCCGAGGGGCTCGCCGCGCACCGTATCGCCGCGGACCCGCGGGGTGGCGCC TACGTCCTGAGCGGTCCGCCTTCCTTCGCGCCCAACGCGCCTCCCGCCGTACTCGGCCGGATGGACGGGCAGCCGCTTCT GGACGTCCTGTCCATTCCCTCCGGCGCTGGTTTGTTCCGCCCGATGGAAGAGAACCCGGACCCGCCTCGGACCCGGGTGC TGGAGACGCTCGCGTGGCCTGGCGAAGTGCCGGTGGCGCTCGCCTGTGACACCGAGGGACGGCTGGCGGTGCTGAGCTGG GTCATGGACCCGGCGCTCGCGGGTGTGCCCCCAGACGCGGCGCACGCGCGACTGCGCTTCTACTCGGGCCGCTTCTCCAC GCCCGTCGCGCTCCCGGGCGTGCTGCGGCCCTTCAGTCTCGCCATCCTTCCGGACGGCCGCGCCGCGGTGCTGTCGCTGC TCGACGACGGCAAGGTGGAGGCGGTGGCCTACGCGCTCCCGGCTGGTGCGTCGGAGGCGATTCCCCAGGGAGACTACTTT CCCCTGCCCGGCCATGACGGGGGTCCCTTTCTCCAGGGAGCGAAGCCTCCGCACCACGCCGTCAACCCGGGGCTGGCCGA CATGGCGCCAGTGCCGCTTCAAGCCCTGTCGCTGCCCCGGTGCGCCGAGCGGGGCAGCGCCGCCAACCCGCCGAACCGGC CCTTCGACTCGGGCGACGGGCGCACGGTGTGGCACCGCCTGTACGTGGAGGCGCTGCTGCCCCCACGCACCGGGGTGCGC GTCTGGCTTGCCGCCACCGACGAGCCCCTGGCTCCGCCGAGCGACTCGCCGCACTGGCACGAGCATCGCCTGGGCCTCAT CCCGGAAGCCCCTGTTCATCCAGACGTCCCGCACGGGAGCTGGGTGCCTCTTCCGTCGGAGGTGCCGTTCCAACCGGGAA TGCTGCCCGCGCCGCCGGCCCCGGGCGAGAGTGGCCTGTTCACCGTCCTCATCCAGCGCGCCCACGCGAAGGTGCGTGCG CTCTCCGGACGGTACCTGTGGGTGCGGGTGGAGCTGTTCGGCGACGGCCGCCGGACGCCCGAAGTGGGAGCGCTGCGCGC GTATGCATCGCGCTTCTCCTACGTGGACAACTACCTGCCGTCCCTCTATCGCGAGGAGCTCTTCGGCGAGGACGCGGACA CCACCGGCCGGGCGACTCCCGCGGACTTCCTGGAGCGTTTCCTCGGCATCGTCGAGGGTGTGCTGACGCCCATCGAGGAC CGCATCGCCCATGCGCACGTGCTCACCGACCCGGGGCACGTGCCTGGTGATTCGCTGGAGTGGCTCGCGAGCTGGGTAGG CCTCTCCTTCGACCCCGTGGTGGGTGAGAGCCAGCGGCGCGCGATGCTCCGGTCCGCGCCCGCGCTCGCCCGGCGGCGCG GCTGCGTCGAGGGCCTGCGCCTGGCGCTGGACCTCGTCACCGACGGCGCGGTGAACCGAGGCGCGGTGGTGGTGGTGGAG GACTTCCGGCTTCGGCGCACGCTGGCGACCATCCTCGGCGCGGACCTCGCGGACACGGAGGACCCGTTGCTACCGGGCCT GGCCCGGAGCGGGAACTCCTACGTGGGCGACACGCTCTTCCTCGGGGATGAGGCGCGCAAGGAGTTCCTGGCCGTCTTCG GGGACGAAACGCTGCAGAGCCGGGCGGAGGCGGAGGCGGTGGAGCAGCTCCTGGAGCGGCTGGCACACCGGCTCACGGTG CTGGTGCACCAGGGCACGGACACGCGGACCCTGGGCCTCATCCGGAAGGTGGCGGAGCAGGAGGCCCCCGCGCACGTGCA GGTCTCCGTCATCACCGCGAGCCGTCCGCTGCTCGTCGGAGTCGCGTCGCTGGTGGGCGTGGACACCTACGTCGGACCCG CCCCCGCCCCCACCTCGGTGCGAGTGGGCCACAGCGTGCTGGGGCTCGCGGACGTCATTGAACGCCCGTCGAGCCTGGAC CCCAGATTGGAAGGAGGTTGA
Upstream 100 bases:
>100_bases AGGTGCCGACGATGCTCCACGGCATCGGCGATGAGGGAAGCGGTGGCATGGACTCCTCGCAGGCGGGCGTGGCGGTGCCC ATGGTCCCCGAGGTCTGCTG
Downstream 100 bases:
>100_bases TGACCATGTCGCCCCCGAATGACGCCTTGCTCGACGCGGAGACGCGAGACCGGCTCCACTACGACACCGGCGTGCTCCTG GACGCGGGAGACTTCACCGC
Product: putative phage tail protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Domain Protein
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MDANRLRFYMLADAPDWVTESSVSAGEVCLYDAKRRTLRLGSLGESRTFDEALDLAVLEPRLARVPGAVDAFGTWAWWDD VAGQVRAAGGGAGTTLRFEPAQVGLSGAVTDLSPGAGGILYVAVAQRVVALHLRKVWSAVVFPAEGLAAHRIAADPRGGA YVLSGPPSFAPNAPPAVLGRMDGQPLLDVLSIPSGAGLFRPMEENPDPPRTRVLETLAWPGEVPVALACDTEGRLAVLSW VMDPALAGVPPDAAHARLRFYSGRFSTPVALPGVLRPFSLAILPDGRAAVLSLLDDGKVEAVAYALPAGASEAIPQGDYF PLPGHDGGPFLQGAKPPHHAVNPGLADMAPVPLQALSLPRCAERGSAANPPNRPFDSGDGRTVWHRLYVEALLPPRTGVR VWLAATDEPLAPPSDSPHWHEHRLGLIPEAPVHPDVPHGSWVPLPSEVPFQPGMLPAPPAPGESGLFTVLIQRAHAKVRA LSGRYLWVRVELFGDGRRTPEVGALRAYASRFSYVDNYLPSLYREELFGEDADTTGRATPADFLERFLGIVEGVLTPIED RIAHAHVLTDPGHVPGDSLEWLASWVGLSFDPVVGESQRRAMLRSAPALARRRGCVEGLRLALDLVTDGAVNRGAVVVVE DFRLRRTLATILGADLADTEDPLLPGLARSGNSYVGDTLFLGDEARKEFLAVFGDETLQSRAEAEAVEQLLERLAHRLTV LVHQGTDTRTLGLIRKVAEQEAPAHVQVSVITASRPLLVGVASLVGVDTYVGPAPAPTSVRVGHSVLGLADVIERPSSLD PRLEGG
Sequences:
>Translated_806_residues MDANRLRFYMLADAPDWVTESSVSAGEVCLYDAKRRTLRLGSLGESRTFDEALDLAVLEPRLARVPGAVDAFGTWAWWDD VAGQVRAAGGGAGTTLRFEPAQVGLSGAVTDLSPGAGGILYVAVAQRVVALHLRKVWSAVVFPAEGLAAHRIAADPRGGA YVLSGPPSFAPNAPPAVLGRMDGQPLLDVLSIPSGAGLFRPMEENPDPPRTRVLETLAWPGEVPVALACDTEGRLAVLSW VMDPALAGVPPDAAHARLRFYSGRFSTPVALPGVLRPFSLAILPDGRAAVLSLLDDGKVEAVAYALPAGASEAIPQGDYF PLPGHDGGPFLQGAKPPHHAVNPGLADMAPVPLQALSLPRCAERGSAANPPNRPFDSGDGRTVWHRLYVEALLPPRTGVR VWLAATDEPLAPPSDSPHWHEHRLGLIPEAPVHPDVPHGSWVPLPSEVPFQPGMLPAPPAPGESGLFTVLIQRAHAKVRA LSGRYLWVRVELFGDGRRTPEVGALRAYASRFSYVDNYLPSLYREELFGEDADTTGRATPADFLERFLGIVEGVLTPIED RIAHAHVLTDPGHVPGDSLEWLASWVGLSFDPVVGESQRRAMLRSAPALARRRGCVEGLRLALDLVTDGAVNRGAVVVVE DFRLRRTLATILGADLADTEDPLLPGLARSGNSYVGDTLFLGDEARKEFLAVFGDETLQSRAEAEAVEQLLERLAHRLTV LVHQGTDTRTLGLIRKVAEQEAPAHVQVSVITASRPLLVGVASLVGVDTYVGPAPAPTSVRVGHSVLGLADVIERPSSLD PRLEGG >Mature_806_residues MDANRLRFYMLADAPDWVTESSVSAGEVCLYDAKRRTLRLGSLGESRTFDEALDLAVLEPRLARVPGAVDAFGTWAWWDD VAGQVRAAGGGAGTTLRFEPAQVGLSGAVTDLSPGAGGILYVAVAQRVVALHLRKVWSAVVFPAEGLAAHRIAADPRGGA YVLSGPPSFAPNAPPAVLGRMDGQPLLDVLSIPSGAGLFRPMEENPDPPRTRVLETLAWPGEVPVALACDTEGRLAVLSW VMDPALAGVPPDAAHARLRFYSGRFSTPVALPGVLRPFSLAILPDGRAAVLSLLDDGKVEAVAYALPAGASEAIPQGDYF PLPGHDGGPFLQGAKPPHHAVNPGLADMAPVPLQALSLPRCAERGSAANPPNRPFDSGDGRTVWHRLYVEALLPPRTGVR VWLAATDEPLAPPSDSPHWHEHRLGLIPEAPVHPDVPHGSWVPLPSEVPFQPGMLPAPPAPGESGLFTVLIQRAHAKVRA LSGRYLWVRVELFGDGRRTPEVGALRAYASRFSYVDNYLPSLYREELFGEDADTTGRATPADFLERFLGIVEGVLTPIED RIAHAHVLTDPGHVPGDSLEWLASWVGLSFDPVVGESQRRAMLRSAPALARRRGCVEGLRLALDLVTDGAVNRGAVVVVE DFRLRRTLATILGADLADTEDPLLPGLARSGNSYVGDTLFLGDEARKEFLAVFGDETLQSRAEAEAVEQLLERLAHRLTV LVHQGTDTRTLGLIRKVAEQEAPAHVQVSVITASRPLLVGVASLVGVDTYVGPAPAPTSVRVGHSVLGLADVIERPSSLD PRLEGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85860; Mature: 85860
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANRLRFYMLADAPDWVTESSVSAGEVCLYDAKRRTLRLGSLGESRTFDEALDLAVLEP CCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCC RLARVPGAVDAFGTWAWWDDVAGQVRAAGGGAGTTLRFEPAQVGLSGAVTDLSPGAGGIL HHHHCCCCHHHCCCHHHHHHHCCEEEECCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCH YVAVAQRVVALHLRKVWSAVVFPAEGLAAHRIAADPRGGAYVLSGPPSFAPNAPPAVLGR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHCC MDGQPLLDVLSIPSGAGLFRPMEENPDPPRTRVLETLAWPGEVPVALACDTEGRLAVLSW CCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH VMDPALAGVPPDAAHARLRFYSGRFSTPVALPGVLRPFSLAILPDGRAAVLSLLDDGKVE HHHHHHCCCCCCHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEE AVAYALPAGASEAIPQGDYFPLPGHDGGPFLQGAKPPHHAVNPGLADMAPVPLQALSLPR EEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH CAERGSAANPPNRPFDSGDGRTVWHRLYVEALLPPRTGVRVWLAATDEPLAPPSDSPHWH HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCH EHRLGLIPEAPVHPDVPHGSWVPLPSEVPFQPGMLPAPPAPGESGLFTVLIQRAHAKVRA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHE LSGRYLWVRVELFGDGRRTPEVGALRAYASRFSYVDNYLPSLYREELFGEDADTTGRATP ECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH ADFLERFLGIVEGVLTPIEDRIAHAHVLTDPGHVPGDSLEWLASWVGLSFDPVVGESQRR HHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH AMLRSAPALARRRGCVEGLRLALDLVTDGAVNRGAVVVVEDFRLRRTLATILGADLADTE HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCC DPLLPGLARSGNSYVGDTLFLGDEARKEFLAVFGDETLQSRAEAEAVEQLLERLAHRLTV CCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEE LVHQGTDTRTLGLIRKVAEQEAPAHVQVSVITASRPLLVGVASLVGVDTYVGPAPAPTSV EEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCE RVGHSVLGLADVIERPSSLDPRLEGG ECCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDANRLRFYMLADAPDWVTESSVSAGEVCLYDAKRRTLRLGSLGESRTFDEALDLAVLEP CCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCC RLARVPGAVDAFGTWAWWDDVAGQVRAAGGGAGTTLRFEPAQVGLSGAVTDLSPGAGGIL HHHHCCCCHHHCCCHHHHHHHCCEEEECCCCCCCEEEECHHHCCCCCCCCCCCCCCCCCH YVAVAQRVVALHLRKVWSAVVFPAEGLAAHRIAADPRGGAYVLSGPPSFAPNAPPAVLGR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHCC MDGQPLLDVLSIPSGAGLFRPMEENPDPPRTRVLETLAWPGEVPVALACDTEGRLAVLSW CCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH VMDPALAGVPPDAAHARLRFYSGRFSTPVALPGVLRPFSLAILPDGRAAVLSLLDDGKVE HHHHHHCCCCCCHHHHEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEE AVAYALPAGASEAIPQGDYFPLPGHDGGPFLQGAKPPHHAVNPGLADMAPVPLQALSLPR EEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCH CAERGSAANPPNRPFDSGDGRTVWHRLYVEALLPPRTGVRVWLAATDEPLAPPSDSPHWH HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCH EHRLGLIPEAPVHPDVPHGSWVPLPSEVPFQPGMLPAPPAPGESGLFTVLIQRAHAKVRA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHE LSGRYLWVRVELFGDGRRTPEVGALRAYASRFSYVDNYLPSLYREELFGEDADTTGRATP ECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH ADFLERFLGIVEGVLTPIEDRIAHAHVLTDPGHVPGDSLEWLASWVGLSFDPVVGESQRR HHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHH AMLRSAPALARRRGCVEGLRLALDLVTDGAVNRGAVVVVEDFRLRRTLATILGADLADTE HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCC DPLLPGLARSGNSYVGDTLFLGDEARKEFLAVFGDETLQSRAEAEAVEQLLERLAHRLTV CCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEE LVHQGTDTRTLGLIRKVAEQEAPAHVQVSVITASRPLLVGVASLVGVDTYVGPAPAPTSV EEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCE RVGHSVLGLADVIERPSSLDPRLEGG ECCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA