| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is aat
Identifier: 108761358
GI number: 108761358
Start: 1536615
End: 1537319
Strand: Reverse
Name: aat
Synonym: MXAN_1311
Alternate gene names: 108761358
Gene position: 1537319-1536615 (Counterclockwise)
Preceding gene: 108759446
Following gene: 108758913
Centisome position: 16.82
GC content: 70.21
Gene sequence:
>705_bases GTGCCCATCTACCTGTTGAGTGACGAGCACCCGGAGCTCTTCCCGCCCCCGGAGCGCGCCGACAAGAGCGGCGTCGTCGC CGTTGGCGGTGACTTGCGTCCGGAGCGGCTGCTGGCCGCCTACGCCCGCGGCATCTTCCCCTGGTACAGCGAGGGAGACC CCATCCTCTGGCACTCGCCGGACCCGCGCTTCGTGCTGTCGCCGGACAAGCTCCACGTGGGCCGCTCGCTGCGCAAGACG ATGGCCCGCGGCATCTACGAGGTGCGCTACGACACCGCCTTCCGGCGCGTCATCACCGAATGCAGCCAGGTGCCTCGGCC CGGACAGACGGGCACCTGGATTACCGAGGAGATGATGGAGGCCTACGTCACGCTCCACGAGGCGGGCTTCGCACACTCGG TGGAGGCGTGGGCGGAGGGTGAGCTGAAGGGCGGCCTGTACGGGGTGTCCCTGGGCGCGGCCTTCTTTGGAGAGAGCATG TTCGCGCTGGCCCCGGACGCCTCGAAGGTGGCCTTCGTCACCGCGGCGGAGCGCTTCCAGGGCTGGGGCTTCCAGCTCAT CGACTGCCAGGTGGAGACCGAACACCTGGCCCGCTTCGGCGCGGAGAACTGGCCCCGCAGGCGCTTCCTCTCGGCGCTTG CCCGAGCGATGAAGGAGCCCACCCGGCGCGGGAAGTGGACGGAAGGCGCGGCGGCCGACCCCTGA
Upstream 100 bases:
>100_bases CCTACGGGGTGACGGGTGAGGTGACGGGCCCGCTGCTGCGCGTGCCGTATTCGCTCACGGGCAAGGTGAAGCTGAACGTC TCCCGGTAGAGTGGCACGCC
Downstream 100 bases:
>100_bases GCGCCCGGCGCTTTCGAAATGGCGCGAGCCCCTTTGAATATCGGAAGCGGCGGGCCGTCACGGCCCTACGCCACCGCCAG AGGAGCCGCCCATGCGATGG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPIYLLSDEHPELFPPPERADKSGVVAVGGDLRPERLLAAYARGIFPWYSEGDPILWHSPDPRFVLSPDKLHVGRSLRKT MARGIYEVRYDTAFRRVITECSQVPRPGQTGTWITEEMMEAYVTLHEAGFAHSVEAWAEGELKGGLYGVSLGAAFFGESM FALAPDASKVAFVTAAERFQGWGFQLIDCQVETEHLARFGAENWPRRRFLSALARAMKEPTRRGKWTEGAAADP
Sequences:
>Translated_234_residues MPIYLLSDEHPELFPPPERADKSGVVAVGGDLRPERLLAAYARGIFPWYSEGDPILWHSPDPRFVLSPDKLHVGRSLRKT MARGIYEVRYDTAFRRVITECSQVPRPGQTGTWITEEMMEAYVTLHEAGFAHSVEAWAEGELKGGLYGVSLGAAFFGESM FALAPDASKVAFVTAAERFQGWGFQLIDCQVETEHLARFGAENWPRRRFLSALARAMKEPTRRGKWTEGAAADP >Mature_233_residues PIYLLSDEHPELFPPPERADKSGVVAVGGDLRPERLLAAYARGIFPWYSEGDPILWHSPDPRFVLSPDKLHVGRSLRKTM ARGIYEVRYDTAFRRVITECSQVPRPGQTGTWITEEMMEAYVTLHEAGFAHSVEAWAEGELKGGLYGVSLGAAFFGESMF ALAPDASKVAFVTAAERFQGWGFQLIDCQVETEHLARFGAENWPRRRFLSALARAMKEPTRRGKWTEGAAADP
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=208, Percent_Identity=50.9615384615385, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_MYXXD (Q1DCQ5)
Other databases:
- EMBL: CP000113 - RefSeq: YP_629568.1 - ProteinModelPortal: Q1DCQ5 - SMR: Q1DCQ5 - STRING: Q1DCQ5 - GeneID: 4101804 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_1311 - TIGR: MXAN_1311 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q1DCQ5 - ProtClustDB: PRK00301 - BioCyc: MXAN246197:MXAN_1311-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 26158; Mature: 26027
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYLLSDEHPELFPPPERADKSGVVAVGGDLRPERLLAAYARGIFPWYSEGDPILWHSP CEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC DPRFVLSPDKLHVGRSLRKTMARGIYEVRYDTAFRRVITECSQVPRPGQTGTWITEEMME CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AYVTLHEAGFAHSVEAWAEGELKGGLYGVSLGAAFFGESMFALAPDASKVAFVTAAERFQ HHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCEEEEEEHHHHC GWGFQLIDCQVETEHLARFGAENWPRRRFLSALARAMKEPTRRGKWTEGAAADP CCCEEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PIYLLSDEHPELFPPPERADKSGVVAVGGDLRPERLLAAYARGIFPWYSEGDPILWHSP EEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECC DPRFVLSPDKLHVGRSLRKTMARGIYEVRYDTAFRRVITECSQVPRPGQTGTWITEEMME CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AYVTLHEAGFAHSVEAWAEGELKGGLYGVSLGAAFFGESMFALAPDASKVAFVTAAERFQ HHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCEEECCCCCCEEEEEEHHHHC GWGFQLIDCQVETEHLARFGAENWPRRRFLSALARAMKEPTRRGKWTEGAAADP CCCEEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA