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The map label for this gene is ydaV [C]

Identifier: 108760952

GI number: 108760952

Start: 4212522

End: 4213283

Strand: Reverse

Name: ydaV [C]

Synonym: MXAN_3611

Alternate gene names: 108760952

Gene position: 4213283-4212522 (Counterclockwise)

Preceding gene: 108762947

Following gene: 108757844

Centisome position: 46.1

GC content: 65.62

Gene sequence:

>762_bases
ATGCTGGTGGAACAGACGCTGGAGAAACTCAACGGGATGAAGCTGCACGGGATGGCCTCGTACCTGCGCGACTGGTTGGC
GAGGCCAGGGGAGCGAGATGTTGGCCCAGCCGACCTGGTGGGCCTGCTGGCCGACGCGGAGTGGATGCACCGAGAGAACA
AGAAACTCTCCTCTCGGCTGAGCGCCGCGCGCCTGCGCCAGGCCGCGGCCTTGGAAGACATCGACTACGGGCACGCGCGC
GGGCTCGCAAAGACTCAGGTGATGGAGCTGTCCACCTCGAAGTGGGCGGCGGACAAGCAGAATGTCCTCCTCACCGGGCC
CACGGGCGTCGGCAAATCCTTCCTCGCATGCGCCCTGGGCCAGAAGGCGTGTCGGGATGGCTACTCGGTGGTGTACCGCC
GGGCCTCACGTCTCTTCGATGAGCTCGCCCAGGCGCGCGCCGATGGAACCTACGCGCACGTGCTCAAGCGACTGGCCAAG
GCCCAGGTGCTCATCCTCGATGACTTCGGCCTTGAGCCGCTCGGCGCTCCGGAGCGCAAGGAGTTGCTCGAAGTCCTGGA
GGACCGCTACCAGCTCGCGAGCACCGTGGTGACATCCCAGCTTGAGCCGAAAGACTGGCACGCCGTCATCGGCGACGCGA
CGCTCGCCGACGCCATCCTCGACCGTCTGGTCCACAACGCCCATCGCATCAAGCTGGGCGGAGAGTCCATCCGGTACGTG
GAGACAAATTTGACGAAGGGCCGCAAGCAGGCCAAGGGATGA

Upstream 100 bases:

>100_bases
GCGAGTCCTCGGTCACCCGCACCCGGAAGGGGCCCGCGCGCGCCCTGAGAAGCTGGCGCGCGCGGGCAAGCCCCCATGAC
CGACATGAGGAACGAAGCCA

Downstream 100 bases:

>100_bases
ACCACCCAGCGTCGCTGACGCTCCGACCGCTCGCCATCAGCCGGAATCGCTGCTCGGCTTGAGCCGGAACGAGTGCTCAC
CATGACCGGAATACGCACTC

Product: IS21 family transposition helper protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLVEQTLEKLNGMKLHGMASYLRDWLARPGERDVGPADLVGLLADAEWMHRENKKLSSRLSAARLRQAAALEDIDYGHAR
GLAKTQVMELSTSKWAADKQNVLLTGPTGVGKSFLACALGQKACRDGYSVVYRRASRLFDELAQARADGTYAHVLKRLAK
AQVLILDDFGLEPLGAPERKELLEVLEDRYQLASTVVTSQLEPKDWHAVIGDATLADAILDRLVHNAHRIKLGGESIRYV
ETNLTKGRKQAKG

Sequences:

>Translated_253_residues
MLVEQTLEKLNGMKLHGMASYLRDWLARPGERDVGPADLVGLLADAEWMHRENKKLSSRLSAARLRQAAALEDIDYGHAR
GLAKTQVMELSTSKWAADKQNVLLTGPTGVGKSFLACALGQKACRDGYSVVYRRASRLFDELAQARADGTYAHVLKRLAK
AQVLILDDFGLEPLGAPERKELLEVLEDRYQLASTVVTSQLEPKDWHAVIGDATLADAILDRLVHNAHRIKLGGESIRYV
ETNLTKGRKQAKG
>Mature_253_residues
MLVEQTLEKLNGMKLHGMASYLRDWLARPGERDVGPADLVGLLADAEWMHRENKKLSSRLSAARLRQAAALEDIDYGHAR
GLAKTQVMELSTSKWAADKQNVLLTGPTGVGKSFLACALGQKACRDGYSVVYRRASRLFDELAQARADGTYAHVLKRLAK
AQVLILDDFGLEPLGAPERKELLEVLEDRYQLASTVVTSQLEPKDWHAVIGDATLADAILDRLVHNAHRIKLGGESIRYV
ETNLTKGRKQAKG

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690 [H]

Pfam domain/function: PF01695 IstB; PF08483 IstB_N [H]

EC number: NA

Molecular weight: Translated: 27953; Mature: 27953

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVEQTLEKLNGMKLHGMASYLRDWLARPGERDVGPADLVGLLADAEWMHRENKKLSSRL
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAARLRQAAALEDIDYGHARGLAKTQVMELSTSKWAADKQNVLLTGPTGVGKSFLACALG
HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH
QKACRDGYSVVYRRASRLFDELAQARADGTYAHVLKRLAKAQVLILDDFGLEPLGAPERK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCHH
ELLEVLEDRYQLASTVVTSQLEPKDWHAVIGDATLADAILDRLVHNAHRIKLGGESIRYV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCEEEE
ETNLTKGRKQAKG
HHHHHHHHHHCCC
>Mature Secondary Structure
MLVEQTLEKLNGMKLHGMASYLRDWLARPGERDVGPADLVGLLADAEWMHRENKKLSSRL
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SAARLRQAAALEDIDYGHARGLAKTQVMELSTSKWAADKQNVLLTGPTGVGKSFLACALG
HHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHH
QKACRDGYSVVYRRASRLFDELAQARADGTYAHVLKRLAKAQVLILDDFGLEPLGAPERK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCHH
ELLEVLEDRYQLASTVVTSQLEPKDWHAVIGDATLADAILDRLVHNAHRIKLGGESIRYV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCEEEE
ETNLTKGRKQAKG
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]