| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760902
Identifier: 108760902
GI number: 108760902
Start: 5975648
End: 5976151
Strand: Direct
Name: 108760902
Synonym: MXAN_4776
Alternate gene names: NA
Gene position: 5975648-5976151 (Clockwise)
Preceding gene: 108761746
Following gene: 108763277
Centisome position: 65.38
GC content: 70.24
Gene sequence:
>504_bases ATGAGCCTGCGCCTCCTGTCCCCACTGTTGCTGCTCGGCCTTGGCGCGTGCGGCCCTGACGCCGAGCCCGCGGGTCGCTT TCCGCTCGCCCTGACGATGGAGCGCGCGGTGGCCAACGACGTCCAGGCGCTACAGGTGGCCGTGGTGTCACGGGGCTCCA GCCGCAGTTGCACCGAGATTCAGCGCACGTGCCTGGGCACCCAGGTGCGGCGTGACGACCTGGTGGTGCTGAAGGACGCC CAGGGGCGCGAGGGCAGGGCCCTCCGCTTCCCAGTGGACCTGGCGACCCTCCAGTCGGGAGGAAGCCTGGAGCTGGCGGT GGACGTGCCGGTGGGCCGAGATTACGCGCTCGTCATCGAGGCGATCACCACGGGGACCCCGCCCGGCTTCCTGGGGAGTT CGTGCAACTACCTCCGTGAGGTCAACGCGGGCGACAACGCCCCGGTGATTGCCGCGCCCCTGACGCTGACCGGTGGAGAT TGCAATCCGTCCATCGCGCCCTGA
Upstream 100 bases:
>100_bases GCGCGGTGGCCATTGGCGCCACCGCCGGCATCGTGGCGCTGACCTCCGGCGAAGAGCGGGGCCGCGTTCCCATCACCATC CGCGTGGAGCCCCCCGCCCC
Downstream 100 bases:
>100_bases GCGCGGAGGGACTCGAGAGGGCTTCATGTCGCGCATCCTGATTATCGAGGACGAGCAGGACCTGGCAGGTCTCGTCGACT ACAACCTGCGGGCCGCGGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSLRLLSPLLLLGLGACGPDAEPAGRFPLALTMERAVANDVQALQVAVVSRGSSRSCTEIQRTCLGTQVRRDDLVVLKDA QGREGRALRFPVDLATLQSGGSLELAVDVPVGRDYALVIEAITTGTPPGFLGSSCNYLREVNAGDNAPVIAAPLTLTGGD CNPSIAP
Sequences:
>Translated_167_residues MSLRLLSPLLLLGLGACGPDAEPAGRFPLALTMERAVANDVQALQVAVVSRGSSRSCTEIQRTCLGTQVRRDDLVVLKDA QGREGRALRFPVDLATLQSGGSLELAVDVPVGRDYALVIEAITTGTPPGFLGSSCNYLREVNAGDNAPVIAAPLTLTGGD CNPSIAP >Mature_166_residues SLRLLSPLLLLGLGACGPDAEPAGRFPLALTMERAVANDVQALQVAVVSRGSSRSCTEIQRTCLGTQVRRDDLVVLKDAQ GREGRALRFPVDLATLQSGGSLELAVDVPVGRDYALVIEAITTGTPPGFLGSSCNYLREVNAGDNAPVIAAPLTLTGGDC NPSIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17340; Mature: 17209
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRLLSPLLLLGLGACGPDAEPAGRFPLALTMERAVANDVQALQVAVVSRGSSRSCTEI CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCHHHH QRTCLGTQVRRDDLVVLKDAQGREGRALRFPVDLATLQSGGSLELAVDVPVGRDYALVIE HHHHHCCCCCCCCEEEEECCCCCCCCEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEE AITTGTPPGFLGSSCNYLREVNAGDNAPVIAAPLTLTGGDCNPSIAP EECCCCCCCCCCCCCHHHEECCCCCCCCEEEEEEEEECCCCCCCCCC >Mature Secondary Structure SLRLLSPLLLLGLGACGPDAEPAGRFPLALTMERAVANDVQALQVAVVSRGSSRSCTEI CCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCHHHH QRTCLGTQVRRDDLVVLKDAQGREGRALRFPVDLATLQSGGSLELAVDVPVGRDYALVIE HHHHHCCCCCCCCEEEEECCCCCCCCEEECCEEEEECCCCCCEEEEEECCCCCCEEEEEE AITTGTPPGFLGSSCNYLREVNAGDNAPVIAAPLTLTGGDCNPSIAP EECCCCCCCCCCCCCHHHEECCCCCCCCEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA