Click here to switch to the map view.

The map label for this gene is ydgJ [H]

Identifier: 108760664

GI number: 108760664

Start: 6900960

End: 6902033

Strand: Reverse

Name: ydgJ [H]

Synonym: MXAN_5552

Alternate gene names: 108760664

Gene position: 6902033-6900960 (Counterclockwise)

Preceding gene: 108761629

Following gene: 108763104

Centisome position: 75.52

GC content: 69.46

Gene sequence:

>1074_bases
ATGGCCTTCTCCTCTCCTGGACGAGCACCCCTCCGAGTGGCCTTGCTGGGCTTCGGCATCGCGGGCAGGTCCATCCACGC
TCCGCTGATTCAAGGTGTGGACGGGCTGGTGCTCCAGGTCGTCGCCTCGCGCCAGGAAGAGGCGGTGCGGTCCACGCTGC
CTCACGTCACCCTCTGTGGCTCCCATGAGGACGGAGCCACACATGCCGACGTGGACCTGGTTGTCATCGCCACGGCGAAT
GACCGACACGCGCCGCTGGCCGAGGCCGCGCTCCGGGCGGGAAAGCACGTCGTCGTCGACAAGCCCTTCACCATCACCCT
GGCCGAAGCCCGCGCGTTGCGGGCCCTGGCGGAGTCGCGTGGCCTGCTGCTCTCGGTGTTCCACAACCGGCGTTGGGACA
CCGACTTCCTGGCGTTGAAGGCGCTGCTGGCGGAAGGCACCCTGGGCCACGTTGCTCACGTCGAGTCGCGCTTCGACCGG
TTCCGTCCGGAGGTCCGCACCCAGTGGCGGGAACAGAGGGTTCCGGGCGCGGGCGTGTGGTTCGACCTGGGGCCGCACCT
CGTCGACCAGGCGCTGCAACTGTTTGGACTGCCGGAGTCGGTGTCCGGTACGCGCGAGGTCTTGCGCGAGGGCGCTTTCG
TCGATGACTGGTTCCAGTACACGCTCGTCTATCCACGGCGGCAGGTGGTGCTCCAAGCCTCCATGCTCATCGCGGCCCTG
ATGCCTCGCTTCGCCGTACATGGCTCGCGGGGCTCGTGGCTCACCTTGGGTAGGGAGCCGCAGGTGCCACGTCTGGTGCT
GGGTGAGTCTCCAGAAGGCGCGGGGTGGGGCGAGGCCCCGCCGCCTGGACGGGATGGAGCGCCTACCGTCGCTTCGGCAG
GGGACTACCGCCAGTACTATGCGGGCATTCGGGATGCCCTGCTGGGAGGGGCGCCCAACCCCGTGACGCCCATCCAGGCC
GTGGCCGTCCAGGCCGTGCTGGAGGCGGGCATCCGGGCGCAAGAGCGTGGCGGCGCACAGGGCCTGGACCTCTCGGAGGC
GGAGCGTGCCGCCTTCGACGCAGGCGCTGCTTGA

Upstream 100 bases:

>100_bases
AAGCCTCGGCGCCGAGGCCTCCCCGGAAGCCCGCTCCCGACCGCGACGCCGCCCGTCCTCCTCGGCGGGCGGCGTTGCCC
TTTCCAGGGTAGGGTGCGAC

Downstream 100 bases:

>100_bases
TTCCCGCCCGGTGGGATGCCTACTCCTAGCCCCGTCGTGGACTCTCCTTGTCGCCTGCGCGACCCCCTGAGGACCTCTTG
AGCTCGAAGAAGCCCGGCCG

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAFSSPGRAPLRVALLGFGIAGRSIHAPLIQGVDGLVLQVVASRQEEAVRSTLPHVTLCGSHEDGATHADVDLVVIATAN
DRHAPLAEAALRAGKHVVVDKPFTITLAEARALRALAESRGLLLSVFHNRRWDTDFLALKALLAEGTLGHVAHVESRFDR
FRPEVRTQWREQRVPGAGVWFDLGPHLVDQALQLFGLPESVSGTREVLREGAFVDDWFQYTLVYPRRQVVLQASMLIAAL
MPRFAVHGSRGSWLTLGREPQVPRLVLGESPEGAGWGEAPPPGRDGAPTVASAGDYRQYYAGIRDALLGGAPNPVTPIQA
VAVQAVLEAGIRAQERGGAQGLDLSEAERAAFDAGAA

Sequences:

>Translated_357_residues
MAFSSPGRAPLRVALLGFGIAGRSIHAPLIQGVDGLVLQVVASRQEEAVRSTLPHVTLCGSHEDGATHADVDLVVIATAN
DRHAPLAEAALRAGKHVVVDKPFTITLAEARALRALAESRGLLLSVFHNRRWDTDFLALKALLAEGTLGHVAHVESRFDR
FRPEVRTQWREQRVPGAGVWFDLGPHLVDQALQLFGLPESVSGTREVLREGAFVDDWFQYTLVYPRRQVVLQASMLIAAL
MPRFAVHGSRGSWLTLGREPQVPRLVLGESPEGAGWGEAPPPGRDGAPTVASAGDYRQYYAGIRDALLGGAPNPVTPIQA
VAVQAVLEAGIRAQERGGAQGLDLSEAERAAFDAGAA
>Mature_356_residues
AFSSPGRAPLRVALLGFGIAGRSIHAPLIQGVDGLVLQVVASRQEEAVRSTLPHVTLCGSHEDGATHADVDLVVIATAND
RHAPLAEAALRAGKHVVVDKPFTITLAEARALRALAESRGLLLSVFHNRRWDTDFLALKALLAEGTLGHVAHVESRFDRF
RPEVRTQWREQRVPGAGVWFDLGPHLVDQALQLFGLPESVSGTREVLREGAFVDDWFQYTLVYPRRQVVLQASMLIAALM
PRFAVHGSRGSWLTLGREPQVPRLVLGESPEGAGWGEAPPPGRDGAPTVASAGDYRQYYAGIRDALLGGAPNPVTPIQAV
AVQAVLEAGIRAQERGGAQGLDLSEAERAAFDAGAA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=335, Percent_Identity=50.7462686567164, Blast_Score=319, Evalue=2e-88,
Organism=Escherichia coli, GI1789848, Length=337, Percent_Identity=32.3442136498516, Blast_Score=168, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24581117, Length=194, Percent_Identity=31.9587628865979, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38239; Mature: 38108

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSSPGRAPLRVALLGFGIAGRSIHAPLIQGVDGLVLQVVASRQEEAVRSTLPHVTLCG
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SHEDGATHADVDLVVIATANDRHAPLAEAALRAGKHVVVDKPFTITLAEARALRALAESR
CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHCC
GLLLSVFHNRRWDTDFLALKALLAEGTLGHVAHVESRFDRFRPEVRTQWREQRVPGAGVW
CCEEEHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEE
FDLGPHLVDQALQLFGLPESVSGTREVLREGAFVDDWFQYTLVYPRRQVVLQASMLIAAL
ECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHH
MPRFAVHGSRGSWLTLGREPQVPRLVLGESPEGAGWGEAPPPGRDGAPTVASAGDYRQYY
HHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AGIRDALLGGAPNPVTPIQAVAVQAVLEAGIRAQERGGAQGLDLSEAERAAFDAGAA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFSSPGRAPLRVALLGFGIAGRSIHAPLIQGVDGLVLQVVASRQEEAVRSTLPHVTLCG
CCCCCCCCCEEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEC
SHEDGATHADVDLVVIATANDRHAPLAEAALRAGKHVVVDKPFTITLAEARALRALAESR
CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHCC
GLLLSVFHNRRWDTDFLALKALLAEGTLGHVAHVESRFDRFRPEVRTQWREQRVPGAGVW
CCEEEHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEE
FDLGPHLVDQALQLFGLPESVSGTREVLREGAFVDDWFQYTLVYPRRQVVLQASMLIAAL
ECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHH
MPRFAVHGSRGSWLTLGREPQVPRLVLGESPEGAGWGEAPPPGRDGAPTVASAGDYRQYY
HHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AGIRDALLGGAPNPVTPIQAVAVQAVLEAGIRAQERGGAQGLDLSEAERAAFDAGAA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]