| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pstC [H]
Identifier: 108760429
GI number: 108760429
Start: 5988503
End: 5989501
Strand: Direct
Name: pstC [H]
Synonym: MXAN_4789
Alternate gene names: 108760429
Gene position: 5988503-5989501 (Clockwise)
Preceding gene: 108759323
Following gene: 108758134
Centisome position: 65.52
GC content: 68.17
Gene sequence:
>999_bases ATGGATAGACAGGCGACCATGGAGCAAGGTCTCACGCGGGTCGTGGCCGCGCCGCGCCTGTCCGCGGCGGCGCGGAAGCG TCAACTGCGGGAGAAGGCCGTCGCGGGCTTCATCACCCTGATGGCGTTCACGGGCATCGCCGCGCTCATCCTCATCATCG TCTTCGTGGCCAAGGAGGCGCTGACGCTCTTCACCGACGCGGACGCCCGCCACGAAGCCAGCCTGGCCAAGATGTTCCTG CCGCAGGAGGGCCGCTACCCGTTCCGGTGGCAGCCCGTGTCGGACACGCCCAAGGTCAGCATGATTCCGCTGTTCGTGGG CACGCTGAAAATCACCCTGGTCTCCATGCTGGTGGCGGTGCCCATGGGCGTCTTCAGCGCGCTCTTCGTCGCGGAGTTCG CCCCGCGCCGCCTGCGCGAGTTGCTCAAGCCCATCATCGAACTGCTGGCCGGCATCCCCTCGGTGGTGCTGGGCTTCTTC GCGCTGATGGTGCTGTCCCCGGTGGTGAAGGACCTGTTCCACCTGGACCGGCCGCTCAACGGCACGCTGGCGGGGCTGGC GCTGGCGCTGGCCATCGTCCCGGTCATCTTCACCGTATCCGAGGACGCGCTCACCGCGGTGCCCCGCAGCTACCGCGAGG CCTCGCTGGCGCTGGGCGCCACGCTCTGGGAGACGGCGTGGAAGGTGGTGCTGCCCGCGGCGGCCCCCGGCATCCTCGCC GCGTGCGTGCTGGGCTTCGGCCGGGCCATTGGCGAGACGATGATTGTCCTCATGGCGTCAGGCAACGCGGACATCGTGTC CTGGAACCTGGGGGACTCGGCGCGCTCGCTGTCGGCCACCATCGCGGCGGAGATGGGTGAAGTGGTGGTGGGCAGCCCGC ACTACTCCCTGCTCTTCTTCATCGGCGTGGAGCTGTTCATCTTCACCTTCGTCCTCAACATGGTCGCCTCCACGTGGACG AAGAAGGTCCTCCAGCGGCTGACCGGGAGCGCCTCGTGA
Upstream 100 bases:
>100_bases CTCTCCCCCGAAGGTCAGGCGATCGTCACCCAGGTCGGCTACTTCCCCGTGAAGTAGCCGCGGAGCGTCACACGAATGTC ACAAGAGGCGCTGAATCCCT
Downstream 100 bases:
>100_bases AGTACACCACGCGCCGGGCGGTGGGGCTGGGCCTCACCGGACTGACGGCCCTCGCGGCCTTCTTCATCGTGGGCATGTTG GCCCTCATCCTGCTGAACAT
Product: phosphate ABC transporter permease PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MDRQATMEQGLTRVVAAPRLSAAARKRQLREKAVAGFITLMAFTGIAALILIIVFVAKEALTLFTDADARHEASLAKMFL PQEGRYPFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAVPMGVFSALFVAEFAPRRLRELLKPIIELLAGIPSVVLGFF ALMVLSPVVKDLFHLDRPLNGTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKVVLPAAAPGILA ACVLGFGRAIGETMIVLMASGNADIVSWNLGDSARSLSATIAAEMGEVVVGSPHYSLLFFIGVELFIFTFVLNMVASTWT KKVLQRLTGSAS
Sequences:
>Translated_332_residues MDRQATMEQGLTRVVAAPRLSAAARKRQLREKAVAGFITLMAFTGIAALILIIVFVAKEALTLFTDADARHEASLAKMFL PQEGRYPFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAVPMGVFSALFVAEFAPRRLRELLKPIIELLAGIPSVVLGFF ALMVLSPVVKDLFHLDRPLNGTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKVVLPAAAPGILA ACVLGFGRAIGETMIVLMASGNADIVSWNLGDSARSLSATIAAEMGEVVVGSPHYSLLFFIGVELFIFTFVLNMVASTWT KKVLQRLTGSAS >Mature_332_residues MDRQATMEQGLTRVVAAPRLSAAARKRQLREKAVAGFITLMAFTGIAALILIIVFVAKEALTLFTDADARHEASLAKMFL PQEGRYPFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAVPMGVFSALFVAEFAPRRLRELLKPIIELLAGIPSVVLGFF ALMVLSPVVKDLFHLDRPLNGTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKVVLPAAAPGILA ACVLGFGRAIGETMIVLMASGNADIVSWNLGDSARSLSATIAAEMGEVVVGSPHYSLLFFIGVELFIFTFVLNMVASTWT KKVLQRLTGSAS
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=248, Percent_Identity=33.0645161290323, Blast_Score=117, Evalue=7e-28, Organism=Escherichia coli, GI1790163, Length=250, Percent_Identity=27.6, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788764, Length=177, Percent_Identity=31.0734463276836, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35657; Mature: 35657
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50928 ABC_TM1 ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRQATMEQGLTRVVAAPRLSAAARKRQLREKAVAGFITLMAFTGIAALILIIVFVAKEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLFTDADARHEASLAKMFLPQEGRYPFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAV HHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PMGVFSALFVAEFAPRRLRELLKPIIELLAGIPSVVLGFFALMVLSPVVKDLFHLDRPLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKVVLPAAAPGILA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ACVLGFGRAIGETMIVLMASGNADIVSWNLGDSARSLSATIAAEMGEVVVGSPHYSLLFF HHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCEEECCCHHHHHHH IGVELFIFTFVLNMVASTWTKKVLQRLTGSAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDRQATMEQGLTRVVAAPRLSAAARKRQLREKAVAGFITLMAFTGIAALILIIVFVAKEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLFTDADARHEASLAKMFLPQEGRYPFRWQPVSDTPKVSMIPLFVGTLKITLVSMLVAV HHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PMGVFSALFVAEFAPRRLRELLKPIIELLAGIPSVVLGFFALMVLSPVVKDLFHLDRPLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTLAGLALALAIVPVIFTVSEDALTAVPRSYREASLALGATLWETAWKVVLPAAAPGILA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ACVLGFGRAIGETMIVLMASGNADIVSWNLGDSARSLSATIAAEMGEVVVGSPHYSLLFF HHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCEEECCCHHHHHHH IGVELFIFTFVLNMVASTWTKKVLQRLTGSAS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]