| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is crt [H]
Identifier: 108760163
GI number: 108760163
Start: 4565495
End: 4566271
Strand: Reverse
Name: crt [H]
Synonym: MXAN_3799
Alternate gene names: 108760163
Gene position: 4566271-4565495 (Counterclockwise)
Preceding gene: 108760694
Following gene: 108759837
Centisome position: 49.96
GC content: 70.14
Gene sequence:
>777_bases ATGGCCTACGAGAACATCCGGCTGGAGCAGGAGGGCGCCATCGCGACCCTCTTCATCGACCGCCCCAAGGCGCTCAACGC CCTCAACACGAAGACGCTGCAGGAGCTTGAGTCCGCGCTGAAGTCCCTTCCCGCGGACGTGCGCGTCCTCATCGTCACCG GCGGCGGCGAGAAGGCCTTCGTCGCGGGCGCGGACATCGCGGAGATGGCCGCGCTCACCGACGCGCAGGCCCAGGAGTTC GGCGCCCTGGGGCACCGGGTCATGGCCGCGCTGGAGGCGCTGCCCATTCCGACCATCGCGGCCGTGAATGGCTTCGCGCT CGGCGGCGGCTCCGAGCTGGCCCTGGCCTGTGACTTCATCTACGCCTCCGAGAAGGCCAAGCTCGGCCTGCCGGAAGTCG GCCTGGGCGTCATCCCCGGCTTCGGCGGCACCCAGCGCCTCACCCGCGTGGTGGGCCGCGCCCGCGCCAAGGAGCTCATC TTCACCGGCGACCGCATCGACGCGGCGAAGGCGAAGGAGATTGGCATGGTGCTGGAGGTCCTCCCCGCGGACGGCCTGCT CGCGCACTGCCGCGCCGTGGCGGAGAAGATCGTCAAGAACAGCCCGCTGGCCATCTCCAAGGCCAAGCAGGTCATCGAGG CCGGCGCCGACCAGGACCTGCGCGCGGCGAACGACATCGAGCGCAAGGCCTTCGGCGACCTGTTCGGCTCCGAGGACCAG CGCGAAGGCATGAAGGCCTTCCTGGAGAAGCGCCCCGCGACCTTCACCGGGAAGTAG
Upstream 100 bases:
>100_bases GCAGTACGTGGAGGCCGGCTGGTACGGCAAGAAGAACGGCCGCGGCTTCTACAAGTACTGAGCCTCGCGGTTACCCACTT CCACCCCAGGAGCCTCGAAC
Downstream 100 bases:
>100_bases CGCGGTGAAGGGGCTCGCGGCCGGGGGACTGCTGGCGTGTCTCCTGGCCGCCGTGCCGGCCCAGGCTTCGGACGAAGGTG AGGACGACGACGGGCGGGCC
Product: 3-hydroxybutyryl-CoA dehydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAYENIRLEQEGAIATLFIDRPKALNALNTKTLQELESALKSLPADVRVLIVTGGGEKAFVAGADIAEMAALTDAQAQEF GALGHRVMAALEALPIPTIAAVNGFALGGGSELALACDFIYASEKAKLGLPEVGLGVIPGFGGTQRLTRVVGRARAKELI FTGDRIDAAKAKEIGMVLEVLPADGLLAHCRAVAEKIVKNSPLAISKAKQVIEAGADQDLRAANDIERKAFGDLFGSEDQ REGMKAFLEKRPATFTGK
Sequences:
>Translated_258_residues MAYENIRLEQEGAIATLFIDRPKALNALNTKTLQELESALKSLPADVRVLIVTGGGEKAFVAGADIAEMAALTDAQAQEF GALGHRVMAALEALPIPTIAAVNGFALGGGSELALACDFIYASEKAKLGLPEVGLGVIPGFGGTQRLTRVVGRARAKELI FTGDRIDAAKAKEIGMVLEVLPADGLLAHCRAVAEKIVKNSPLAISKAKQVIEAGADQDLRAANDIERKAFGDLFGSEDQ REGMKAFLEKRPATFTGK >Mature_257_residues AYENIRLEQEGAIATLFIDRPKALNALNTKTLQELESALKSLPADVRVLIVTGGGEKAFVAGADIAEMAALTDAQAQEFG ALGHRVMAALEALPIPTIAAVNGFALGGGSELALACDFIYASEKAKLGLPEVGLGVIPGFGGTQRLTRVVGRARAKELIF TGDRIDAAKAKEIGMVLEVLPADGLLAHCRAVAEKIVKNSPLAISKAKQVIEAGADQDLRAANDIERKAFGDLFGSEDQR EGMKAFLEKRPATFTGK
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=259, Percent_Identity=44.7876447876448, Blast_Score=203, Evalue=1e-52, Organism=Homo sapiens, GI4502327, Length=256, Percent_Identity=37.890625, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI150378541, Length=251, Percent_Identity=31.8725099601594, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=30.8300395256917, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI20127408, Length=179, Percent_Identity=34.6368715083799, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI68989263, Length=183, Percent_Identity=38.2513661202186, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI213417737, Length=233, Percent_Identity=26.1802575107296, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI157694516, Length=233, Percent_Identity=26.1802575107296, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI45643119, Length=253, Percent_Identity=25.296442687747, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI260275230, Length=253, Percent_Identity=25.296442687747, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI260274832, Length=253, Percent_Identity=25.296442687747, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI70995211, Length=224, Percent_Identity=29.4642857142857, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI221136756, Length=254, Percent_Identity=24.4094488188976, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI221136753, Length=254, Percent_Identity=24.4094488188976, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI221307494, Length=247, Percent_Identity=24.2914979757085, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI157694520, Length=190, Percent_Identity=27.3684210526316, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI25453481, Length=259, Percent_Identity=22.007722007722, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI51538573, Length=259, Percent_Identity=22.007722007722, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI37594471, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI37594469, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI4757966, Length=248, Percent_Identity=22.1774193548387, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI51538581, Length=248, Percent_Identity=22.1774193548387, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4757968, Length=260, Percent_Identity=21.5384615384615, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI49355787, Length=260, Percent_Identity=21.5384615384615, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI261878539, Length=80, Percent_Identity=46.25, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI116235487, Length=247, Percent_Identity=21.4574898785425, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787659, Length=250, Percent_Identity=41.2, Blast_Score=181, Evalue=5e-47, Organism=Escherichia coli, GI221142681, Length=261, Percent_Identity=37.1647509578544, Blast_Score=150, Evalue=7e-38, Organism=Escherichia coli, GI1790281, Length=214, Percent_Identity=37.8504672897196, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1788682, Length=270, Percent_Identity=33.7037037037037, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1787660, Length=255, Percent_Identity=35.6862745098039, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=28.735632183908, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI87082183, Length=265, Percent_Identity=29.0566037735849, Blast_Score=106, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17554946, Length=261, Percent_Identity=42.5287356321839, Blast_Score=193, Evalue=6e-50, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=42.7450980392157, Blast_Score=190, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17540714, Length=223, Percent_Identity=37.6681614349776, Blast_Score=147, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17558304, Length=185, Percent_Identity=38.3783783783784, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI25144276, Length=188, Percent_Identity=39.3617021276596, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17508953, Length=188, Percent_Identity=39.3617021276596, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17508951, Length=188, Percent_Identity=39.3617021276596, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17549921, Length=240, Percent_Identity=27.5, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17536985, Length=269, Percent_Identity=27.8810408921933, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI25144160, Length=231, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25144157, Length=231, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17535521, Length=254, Percent_Identity=24.4094488188976, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17560910, Length=253, Percent_Identity=28.8537549407115, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540306, Length=251, Percent_Identity=30.2788844621514, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17534483, Length=250, Percent_Identity=24.4, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25141363, Length=186, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320241, Length=180, Percent_Identity=25.5555555555556, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=44.6153846153846, Blast_Score=207, Evalue=6e-54, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=44.6153846153846, Blast_Score=207, Evalue=6e-54, Organism=Drosophila melanogaster, GI24653139, Length=251, Percent_Identity=37.0517928286853, Blast_Score=155, Evalue=2e-38, Organism=Drosophila melanogaster, GI19922422, Length=252, Percent_Identity=25.3968253968254, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19920382, Length=210, Percent_Identity=31.4285714285714, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19921000, Length=183, Percent_Identity=36.0655737704918, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24583077, Length=183, Percent_Identity=36.0655737704918, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24583079, Length=183, Percent_Identity=36.0655737704918, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24650670, Length=200, Percent_Identity=32.5, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357171, Length=190, Percent_Identity=31.0526315789474, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28571729, Length=162, Percent_Identity=30.8641975308642, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28571730, Length=139, Percent_Identity=31.6546762589928, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654903, Length=235, Percent_Identity=25.531914893617, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24583165, Length=251, Percent_Identity=27.4900398406374, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI19921018, Length=201, Percent_Identity=27.8606965174129, Blast_Score=70, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 27169; Mature: 27038
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYENIRLEQEGAIATLFIDRPKALNALNTKTLQELESALKSLPADVRVLIVTGGGEKAF CCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE VAGADIAEMAALTDAQAQEFGALGHRVMAALEALPIPTIAAVNGFALGGGSELALACDFI EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCEEEEEHHH YASEKAKLGLPEVGLGVIPGFGGTQRLTRVVGRARAKELIFTGDRIDAAKAKEIGMVLEV HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEE LPADGLLAHCRAVAEKIVKNSPLAISKAKQVIEAGADQDLRAANDIERKAFGDLFGSEDQ CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH REGMKAFLEKRPATFTGK HHHHHHHHHHCCCCCCCC >Mature Secondary Structure AYENIRLEQEGAIATLFIDRPKALNALNTKTLQELESALKSLPADVRVLIVTGGGEKAF CCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE VAGADIAEMAALTDAQAQEFGALGHRVMAALEALPIPTIAAVNGFALGGGSELALACDFI EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCEEEEEHHH YASEKAKLGLPEVGLGVIPGFGGTQRLTRVVGRARAKELIFTGDRIDAAKAKEIGMVLEV HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHEE LPADGLLAHCRAVAEKIVKNSPLAISKAKQVIEAGADQDLRAANDIERKAFGDLFGSEDQ CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH REGMKAFLEKRPATFTGK HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]