| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760114
Identifier: 108760114
GI number: 108760114
Start: 5563081
End: 5565465
Strand: Direct
Name: 108760114
Synonym: MXAN_4494
Alternate gene names: NA
Gene position: 5563081-5565465 (Clockwise)
Preceding gene: 108762472
Following gene: 108759207
Centisome position: 60.87
GC content: 69.64
Gene sequence:
>2385_bases GTGGGGGCTCGCGTGCCTGAATATCTCGCACCCGGTGTCTACGTCGAAGAGACGAGTTTCCGAGCCAGGTCCATCGAGGG CGTCAGCACCAGCACCAGCGGCTTCGCGGGTCCGGCACGCAAGGGCCCTGTTTCCGGCCCCCCGTCGCTGGTGACGAGCT TCCCCGAATTCGTCCGGCTCTTTGGCGGCCTCGCGGACCTGGACCTCACCGGCACCCAGGAGACGACCAACTACCTGGCG CACTCGGTCCGCGCCTACTTCAACGAGGGCGGCTCCCGCCTCTACGTGGCTCGCGCCTTCTCGGGGACGCCGGCCAATGC CACCGCTGGCGCGGACGTCATCCCCAACGCGGACGCGAACCTGCGCGCACGCTTCACCGCGAGGTTCCCCGGCCGTGCGG GCAACGGGAGCATCAGCGTCCGGGAAGTGCTCGCGCCCGCCACGGTCGGCGCCATGCGGCGCGCGCCCACGGGCAGCCTG GTCCGGCTGAATCAGACCGCCGCCTCGGCCGCGCGCATCGTGGGCACCCTGCCCCCGCCCTTCAATGTCCCCGATGGCAC CACGCTCACGCTGACGTTCGACGGGAACACCGACGTCACCCTCACCTTCTCCGGGCGAAATGCCGAAGCCGCGGCGGCGG CGGAGCTCGACCCTTCGACGACATTCCTCGAAGCCAACCAGACGCTCACCGTCACCCTGGGCGGACAGGCGCAGACCCTC ACCCTGCCCACCGATACGCCGTTGACGCCCGCGGAGGTCGTGGACACTCTCAACCGGCAGCTTCGGGGTGGTTACGCCCG GCTCAGCGGCGCCGATGACGCCGCGCCCGTCGGCCGTCTCCTCCTGGGCACCGATGCCCGCGGTACCGGGGCCATCATCC AGGTCTCGGCCAACCCGCAGCTCAAGCTCGCTGCACAGACGGTCGACAACGCGGCGGACCCGCAGAGCAACGTGAGCGAC CTGGGCGCGGTGTCCCTCGCGGACATCCAGGTACTCCTGGGTGCCAACGCCACGGCGTCCGTCGATGACAACAAGCTCGT CATCAGCCACCCGCTCCCCGGTGCCAGCCATTCGTTGGAGGTGGCCTCGGTGAGCTCCAGCGCGCTGGGCCTGGACGCGG CCACCTCGGAGCCCGGGACGGACGGCACGGCGGGGGTGACCTGGTGGTTGAAGCAGGCGAACGGCACCTGGTCCAACGGC AGTGACACGTTGCCGCTGCCGAACGACACCGCGTCGCAGTTCCAGCAACTGCCCGGGAACAGCCAGTTCGTCACGCTCAC CGTCACCACGCAGGACGGTGACGGGCAGGAGCGGCTGTATGAAGGGCTGGGCGTGGACCGCGCCCATCCCCGTTACCCGG GCCACGTGCTCACCCCTTCGCCCGCCACGCTCTCCGAGCAGATGGAGCGGATGTACGCGTTCGAGGCGGGCAACGGCGTT TCCGCGTTCGCCCTGCGCACGGCGCTGGCCGCGGGCCCCTTCACGCTCACCGGTGGTTCCGACGGGAGCGAGCCAAGCGC GGCCTCGTACGAAGACGCGTTCGAGCGGCTGGGCGGCGTGGAGGACATCTCCATCATCGCCGCGCCGGGCTCCTCGGCGT ATGCGTCGGCGCAGGCCGTAAGGCTCGGGCTCATCAGCGCCGCGGAGCGACGCCGTGCCTATCGCATCGCGGTGCTGGAC ACGCCGCGCGGATACGGGCCGCAGGACGCGCTGGCACTTCGCGCGCAGGTGGACTCGACCAAGGCCGCGCTCTACTACCC CTGGGTCGTCGTCGCCAACCCGCTGGCCGGGTCCGAGGCGGCCGATGTCCCTCGTGAAATCGCGCTGCCGCCGTCCGCCT TCCTGTGCGGCATCTACGCCCGCAGCGACATCGAACGCGGCGTGTTCAAGGCGCCCGCGAATGAAGTGGTCCGTGGCGCG CTGCGCTTCGAGCAGGACATCCACTTCGCGCAGCAGGAGACGCTCAACCCACAGGGCATCAATTGCCTGCGCTTCTTCCC GGGACGCGGCTACCGCGTGTGGGGCGCGCGCACCGTCAGCTCCGACCCGGAATGGAAGTACGTGAACGTGCGGCGCTACT TCAACTTCCTGGAGCGCTCCGTGGACGAGGGCACGCAGTGGGCCGTGTTCGAGCCCAATGGCGAGCGCCTGTGGGCCAAC ATCCGCGAGACGATTGGCAGCTTCCTGGAGAACCAGTGGCGCACGGGCGCGTTGCTGGGCGCCGACCCGAAGCAGGCGTT CTTCGTCCGGTGTGACCGCACCACCATGGACCAGAACGACCTCGATAACGGCCGGCTCGTCTGCCTCATCGGCGTGGCGG TGGTGAAGCCCGCTGAGTTCGTCATCTTCCGCATCGGCCAGAAGACGGCGGATGCCCGGACCTAA
Upstream 100 bases:
>100_bases TCGCCGCCGGCGAAGAGGTCACCACCACCATCAAGCTCGATTGGGTCGAGCTCTGAACGCAGACCAATGACGGCGCGACC GCGCGCCACGTAACGAGAAA
Downstream 100 bases:
>100_bases CGCAAAGGACTCGCCGCCATGCCTACCCGCCCCACGCCCTACGGCGCCTTCAATTTCGAAATCAGCTTCGACGGCACGTC CTTCGGTGGGTTCTCCGACG
Product: putative Phage tail sheath protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein FI-Like Protein; Phage Tail Sheath Protein Fi-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Cytoplasmic Fibril Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein; Tail Sheath Protein FI; Bacteriophage Tail Sheath Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Phage Protein; Phage Tail Sheath Protein; Phage-Related Tail Sheath Protein
Number of amino acids: Translated: 794; Mature: 793
Protein sequence:
>794_residues MGARVPEYLAPGVYVEETSFRARSIEGVSTSTSGFAGPARKGPVSGPPSLVTSFPEFVRLFGGLADLDLTGTQETTNYLA HSVRAYFNEGGSRLYVARAFSGTPANATAGADVIPNADANLRARFTARFPGRAGNGSISVREVLAPATVGAMRRAPTGSL VRLNQTAASAARIVGTLPPPFNVPDGTTLTLTFDGNTDVTLTFSGRNAEAAAAAELDPSTTFLEANQTLTVTLGGQAQTL TLPTDTPLTPAEVVDTLNRQLRGGYARLSGADDAAPVGRLLLGTDARGTGAIIQVSANPQLKLAAQTVDNAADPQSNVSD LGAVSLADIQVLLGANATASVDDNKLVISHPLPGASHSLEVASVSSSALGLDAATSEPGTDGTAGVTWWLKQANGTWSNG SDTLPLPNDTASQFQQLPGNSQFVTLTVTTQDGDGQERLYEGLGVDRAHPRYPGHVLTPSPATLSEQMERMYAFEAGNGV SAFALRTALAAGPFTLTGGSDGSEPSAASYEDAFERLGGVEDISIIAAPGSSAYASAQAVRLGLISAAERRRAYRIAVLD TPRGYGPQDALALRAQVDSTKAALYYPWVVVANPLAGSEAADVPREIALPPSAFLCGIYARSDIERGVFKAPANEVVRGA LRFEQDIHFAQQETLNPQGINCLRFFPGRGYRVWGARTVSSDPEWKYVNVRRYFNFLERSVDEGTQWAVFEPNGERLWAN IRETIGSFLENQWRTGALLGADPKQAFFVRCDRTTMDQNDLDNGRLVCLIGVAVVKPAEFVIFRIGQKTADART
Sequences:
>Translated_794_residues MGARVPEYLAPGVYVEETSFRARSIEGVSTSTSGFAGPARKGPVSGPPSLVTSFPEFVRLFGGLADLDLTGTQETTNYLA HSVRAYFNEGGSRLYVARAFSGTPANATAGADVIPNADANLRARFTARFPGRAGNGSISVREVLAPATVGAMRRAPTGSL VRLNQTAASAARIVGTLPPPFNVPDGTTLTLTFDGNTDVTLTFSGRNAEAAAAAELDPSTTFLEANQTLTVTLGGQAQTL TLPTDTPLTPAEVVDTLNRQLRGGYARLSGADDAAPVGRLLLGTDARGTGAIIQVSANPQLKLAAQTVDNAADPQSNVSD LGAVSLADIQVLLGANATASVDDNKLVISHPLPGASHSLEVASVSSSALGLDAATSEPGTDGTAGVTWWLKQANGTWSNG SDTLPLPNDTASQFQQLPGNSQFVTLTVTTQDGDGQERLYEGLGVDRAHPRYPGHVLTPSPATLSEQMERMYAFEAGNGV SAFALRTALAAGPFTLTGGSDGSEPSAASYEDAFERLGGVEDISIIAAPGSSAYASAQAVRLGLISAAERRRAYRIAVLD TPRGYGPQDALALRAQVDSTKAALYYPWVVVANPLAGSEAADVPREIALPPSAFLCGIYARSDIERGVFKAPANEVVRGA LRFEQDIHFAQQETLNPQGINCLRFFPGRGYRVWGARTVSSDPEWKYVNVRRYFNFLERSVDEGTQWAVFEPNGERLWAN IRETIGSFLENQWRTGALLGADPKQAFFVRCDRTTMDQNDLDNGRLVCLIGVAVVKPAEFVIFRIGQKTADART >Mature_793_residues GARVPEYLAPGVYVEETSFRARSIEGVSTSTSGFAGPARKGPVSGPPSLVTSFPEFVRLFGGLADLDLTGTQETTNYLAH SVRAYFNEGGSRLYVARAFSGTPANATAGADVIPNADANLRARFTARFPGRAGNGSISVREVLAPATVGAMRRAPTGSLV RLNQTAASAARIVGTLPPPFNVPDGTTLTLTFDGNTDVTLTFSGRNAEAAAAAELDPSTTFLEANQTLTVTLGGQAQTLT LPTDTPLTPAEVVDTLNRQLRGGYARLSGADDAAPVGRLLLGTDARGTGAIIQVSANPQLKLAAQTVDNAADPQSNVSDL GAVSLADIQVLLGANATASVDDNKLVISHPLPGASHSLEVASVSSSALGLDAATSEPGTDGTAGVTWWLKQANGTWSNGS DTLPLPNDTASQFQQLPGNSQFVTLTVTTQDGDGQERLYEGLGVDRAHPRYPGHVLTPSPATLSEQMERMYAFEAGNGVS AFALRTALAAGPFTLTGGSDGSEPSAASYEDAFERLGGVEDISIIAAPGSSAYASAQAVRLGLISAAERRRAYRIAVLDT PRGYGPQDALALRAQVDSTKAALYYPWVVVANPLAGSEAADVPREIALPPSAFLCGIYARSDIERGVFKAPANEVVRGAL RFEQDIHFAQQETLNPQGINCLRFFPGRGYRVWGARTVSSDPEWKYVNVRRYFNFLERSVDEGTQWAVFEPNGERLWANI RETIGSFLENQWRTGALLGADPKQAFFVRCDRTTMDQNDLDNGRLVCLIGVAVVKPAEFVIFRIGQKTADART
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83947; Mature: 83816
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGARVPEYLAPGVYVEETSFRARSIEGVSTSTSGFAGPARKGPVSGPPSLVTSFPEFVRL CCCCCCHHHCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FGGLADLDLTGTQETTNYLAHSVRAYFNEGGSRLYVARAFSGTPANATAGADVIPNADAN HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC LRARFTARFPGRAGNGSISVREVLAPATVGAMRRAPTGSLVRLNQTAASAARIVGTLPPP EEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCC FNVPDGTTLTLTFDGNTDVTLTFSGRNAEAAAAAELDPSTTFLEANQTLTVTLGGQAQTL CCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCCCCCEEEECCCEEEEEECCCEEEE TLPTDTPLTPAEVVDTLNRQLRGGYARLSGADDAAPVGRLLLGTDARGTGAIIQVSANPQ ECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCC LKLAAQTVDNAADPQSNVSDLGAVSLADIQVLLGANATASVDDNKLVISHPLPGASHSLE EEEEEEHHCCCCCCCCCHHHHCCEEHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEE VASVSSSALGLDAATSEPGTDGTAGVTWWLKQANGTWSNGSDTLPLPNDTASQFQQLPGN EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCC SQFVTLTVTTQDGDGQERLYEGLGVDRAHPRYPGHVLTPSPATLSEQMERMYAFEAGNGV CEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCC SAFALRTALAAGPFTLTGGSDGSEPSAASYEDAFERLGGVEDISIIAAPGSSAYASAQAV HHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH RLGLISAAERRRAYRIAVLDTPRGYGPQDALALRAQVDSTKAALYYPWVVVANPLAGSEA HHHHHHHHHCCCEEEEEEEECCCCCCCHHHEEEEEECCCCCEEEEEEEEEEECCCCCCHH ADVPREIALPPSAFLCGIYARSDIERGVFKAPANEVVRGALRFEQDIHFAQQETLNPQGI HCCCHHHCCCCHHHEEEHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC NCLRFFPGRGYRVWGARTVSSDPEWKYVNVRRYFNFLERSVDEGTQWAVFEPNGERLWAN EEEEECCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH IRETIGSFLENQWRTGALLGADPKQAFFVRCDRTTMDQNDLDNGRLVCLIGVAVVKPAEF HHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCEE VIFRIGQKTADART EEEEECCCCCCCCC >Mature Secondary Structure GARVPEYLAPGVYVEETSFRARSIEGVSTSTSGFAGPARKGPVSGPPSLVTSFPEFVRL CCCCCHHHCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FGGLADLDLTGTQETTNYLAHSVRAYFNEGGSRLYVARAFSGTPANATAGADVIPNADAN HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC LRARFTARFPGRAGNGSISVREVLAPATVGAMRRAPTGSLVRLNQTAASAARIVGTLPPP EEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCC FNVPDGTTLTLTFDGNTDVTLTFSGRNAEAAAAAELDPSTTFLEANQTLTVTLGGQAQTL CCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEECCCCCCEEEECCCEEEEEECCCEEEE TLPTDTPLTPAEVVDTLNRQLRGGYARLSGADDAAPVGRLLLGTDARGTGAIIQVSANPQ ECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCC LKLAAQTVDNAADPQSNVSDLGAVSLADIQVLLGANATASVDDNKLVISHPLPGASHSLE EEEEEEHHCCCCCCCCCHHHHCCEEHEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEE VASVSSSALGLDAATSEPGTDGTAGVTWWLKQANGTWSNGSDTLPLPNDTASQFQQLPGN EEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCC SQFVTLTVTTQDGDGQERLYEGLGVDRAHPRYPGHVLTPSPATLSEQMERMYAFEAGNGV CEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHEEECCCCC SAFALRTALAAGPFTLTGGSDGSEPSAASYEDAFERLGGVEDISIIAAPGSSAYASAQAV HHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH RLGLISAAERRRAYRIAVLDTPRGYGPQDALALRAQVDSTKAALYYPWVVVANPLAGSEA HHHHHHHHHCCCEEEEEEEECCCCCCCHHHEEEEEECCCCCEEEEEEEEEEECCCCCCHH ADVPREIALPPSAFLCGIYARSDIERGVFKAPANEVVRGALRFEQDIHFAQQETLNPQGI HCCCHHHCCCCHHHEEEHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC NCLRFFPGRGYRVWGARTVSSDPEWKYVNVRRYFNFLERSVDEGTQWAVFEPNGERLWAN EEEEECCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH IRETIGSFLENQWRTGALLGADPKQAFFVRCDRTTMDQNDLDNGRLVCLIGVAVVKPAEF HHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCEE VIFRIGQKTADART EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA