| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is batB
Identifier: 108759903
GI number: 108759903
Start: 7025811
End: 7026842
Strand: Reverse
Name: batB
Synonym: MXAN_5662
Alternate gene names: NA
Gene position: 7026842-7025811 (Counterclockwise)
Preceding gene: 108762540
Following gene: 108758794
Centisome position: 76.88
GC content: 70.25
Gene sequence:
>1032_bases GTGCTCGGTTACCAGGCGGGGCTCGCGCAGCCCCTCTTCCTGCTGTTCGTGCTCGCGGGCATGATGCTGGGCCTGCTCGC GCTGGTGGGGGCGCTGCGGCGCCGCTCGCGCGTGCGGGCGCTCTTGCATGAACGTCACGCAGAGCGCTTCACGCCGGGCG TGTCGGTGTGGCGTCCGGCCACGCAGGGCGGGTTGTACGGCCTGGGGTTGGCGCTCTTCGGCTTCGCACTGGCGCAGCCG CAGTGTGGCACCAAGAGCGAACTGACGAAGCGGCGCGGCATCGACGTGGTGGTGGCGCTGGATGCCTCCAAGTCCATGCT GGCGCGGGACATCCAGCCCAGCCGCCTGGAGCGCGCGAAGCTGGAGCTGACCACGCTGCTGGACGAGCTGAAGGGCGACC GCGTGGGCCTGGTGGTGTTCGCGGGCGATGCGTTCATCCAGTCCCCGCTCACGTCGGACTACTCGGCGGTGAAGCTGTTC TTGCGCGCGGTGGACCCGGAGGTGATGCCCCAGGGCGGCACCAACGTGGGCGCGGCGCTGCGGCTGTCGCGGCAGGTGCT GGAGAACGCGGACCGCGGCTCGAAGGAGCGCGTGGTCGTCCTGCTGACGGACGGCGAGGACCTGGTCGGCGACGTGGCGG AGGCTACCGAGGCGCTGAAGGATTCGGGCGTGCAGGTGCTGGCGGTGGGCGTGGGCTCGGAGTCCGGTGAGCCCATCCCC GTCTTCGACCGGCGCGGCGCGTTCGTGGACTACAAGAAGGACGCCGCGGGGGAGACGGTGATTACGCGGTTGGACCGGGC GGGGCTGACGGCCATCGCCGAGGCCACCGGAGGCACCTTCTATTTCCAGCCCCGTGGCGTGGCCATGTCGCAGGTGGTGG AGCGCATCGACCAGATGCAGAAGAGTGAGCTGGAGAGCCGGGTGACGGTCCGCTACGACGAGCGCTTCCAGTCGTTCGCC ATCCCGGGGCTGGCCTTGCTGGCGCTGGGAATGTTGTTGCTGCCGTCGTCGCGCCGGAGGCCGTCACCATGA
Upstream 100 bases:
>100_bases TCCTCCTGGCCGCCTTCGGCCTCGCCGCGCTGGAGCTGCTCCTGCGCGCCTCCTTCCTGAGGGTCTTCCCGTGACGCCCG TGGAACCCTGGCGCTTCACC
Downstream 100 bases:
>100_bases GCGCCGCGAGGACGCGCGCGGCGCGGTGGCTGACATGGGGCCTGGTGACGTCGCTGGCGCTGCCGTCGCCCGTGTGGGCC GCGGGGCCGCTGGAGCGGGA
Product: BatB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLGYQAGLAQPLFLLFVLAGMMLGLLALVGALRRRSRVRALLHERHAERFTPGVSVWRPATQGGLYGLGLALFGFALAQP QCGTKSELTKRRGIDVVVALDASKSMLARDIQPSRLERAKLELTTLLDELKGDRVGLVVFAGDAFIQSPLTSDYSAVKLF LRAVDPEVMPQGGTNVGAALRLSRQVLENADRGSKERVVVLLTDGEDLVGDVAEATEALKDSGVQVLAVGVGSESGEPIP VFDRRGAFVDYKKDAAGETVITRLDRAGLTAIAEATGGTFYFQPRGVAMSQVVERIDQMQKSELESRVTVRYDERFQSFA IPGLALLALGMLLLPSSRRRPSP
Sequences:
>Translated_343_residues MLGYQAGLAQPLFLLFVLAGMMLGLLALVGALRRRSRVRALLHERHAERFTPGVSVWRPATQGGLYGLGLALFGFALAQP QCGTKSELTKRRGIDVVVALDASKSMLARDIQPSRLERAKLELTTLLDELKGDRVGLVVFAGDAFIQSPLTSDYSAVKLF LRAVDPEVMPQGGTNVGAALRLSRQVLENADRGSKERVVVLLTDGEDLVGDVAEATEALKDSGVQVLAVGVGSESGEPIP VFDRRGAFVDYKKDAAGETVITRLDRAGLTAIAEATGGTFYFQPRGVAMSQVVERIDQMQKSELESRVTVRYDERFQSFA IPGLALLALGMLLLPSSRRRPSP >Mature_343_residues MLGYQAGLAQPLFLLFVLAGMMLGLLALVGALRRRSRVRALLHERHAERFTPGVSVWRPATQGGLYGLGLALFGFALAQP QCGTKSELTKRRGIDVVVALDASKSMLARDIQPSRLERAKLELTTLLDELKGDRVGLVVFAGDAFIQSPLTSDYSAVKLF LRAVDPEVMPQGGTNVGAALRLSRQVLENADRGSKERVVVLLTDGEDLVGDVAEATEALKDSGVQVLAVGVGSESGEPIP VFDRRGAFVDYKKDAAGETVITRLDRAGLTAIAEATGGTFYFQPRGVAMSQVVERIDQMQKSELESRVTVRYDERFQSFA IPGLALLALGMLLLPSSRRRPSP
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 37036; Mature: 37036
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGYQAGLAQPLFLLFVLAGMMLGLLALVGALRRRSRVRALLHERHAERFTPGVSVWRPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC TQGGLYGLGLALFGFALAQPQCGTKSELTKRRGIDVVVALDASKSMLARDIQPSRLERAK CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHH LELTTLLDELKGDRVGLVVFAGDAFIQSPLTSDYSAVKLFLRAVDPEVMPQGGTNVGAAL HHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH RLSRQVLENADRGSKERVVVLLTDGEDLVGDVAEATEALKDSGVQVLAVGVGSESGEPIP HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC VFDRRGAFVDYKKDAAGETVITRLDRAGLTAIAEATGGTFYFQPRGVAMSQVVERIDQMQ CCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH KSELESRVTVRYDERFQSFAIPGLALLALGMLLLPSSRRRPSP HHHHHHHEEEEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLGYQAGLAQPLFLLFVLAGMMLGLLALVGALRRRSRVRALLHERHAERFTPGVSVWRPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC TQGGLYGLGLALFGFALAQPQCGTKSELTKRRGIDVVVALDASKSMLARDIQPSRLERAK CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHH LELTTLLDELKGDRVGLVVFAGDAFIQSPLTSDYSAVKLFLRAVDPEVMPQGGTNVGAAL HHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHH RLSRQVLENADRGSKERVVVLLTDGEDLVGDVAEATEALKDSGVQVLAVGVGSESGEPIP HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC VFDRRGAFVDYKKDAAGETVITRLDRAGLTAIAEATGGTFYFQPRGVAMSQVVERIDQMQ CCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH KSELESRVTVRYDERFQSFAIPGLALLALGMLLLPSSRRRPSP HHHHHHHEEEEEHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]