| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is arnT [H]
Identifier: 108759379
GI number: 108759379
Start: 6938527
End: 6940710
Strand: Reverse
Name: arnT [H]
Synonym: MXAN_5585
Alternate gene names: 108759379
Gene position: 6940710-6938527 (Counterclockwise)
Preceding gene: 108758273
Following gene: 108758599
Centisome position: 75.94
GC content: 67.9
Gene sequence:
>2184_bases GTGACGGCCACGGCGGGCTTCGCGGCCCTGCTCTTCCTTCCCTACCTGGGCGCGGTGGGGCTCTGGGACCCCTGGGAGAC GCACTACGGCGAAGTCGCGCGGATGATGATTGTCCGCCAGGACTACGTGTATCCCTTCTGGGAAAGCTCGTGGTTCTTCT CCAAGCCGCCGCTCACGATGTGGATGCAGGCGCTGGGCATGAACGTGGTGGGCGCGGCGAACCCGGGTGGGATGCTGGGC CTCTATACGGAGTGGGGCATGCGGATGCCCTTCGCGCTCCTGAGCATCACCGCGGTGGCGCTGCTGTCACTGGCGGTGGC ACGCGTGGTGTCCCGGCGCGCGGGGTTGGCCACCGGCTTCGTGCTGGCCACCATGCCGCTGTACTTCCTGCTCACGCGGC AGACGGTGACGGACACGCCCTTCGTCACCACCTTCATCTGCGCCATGGCGTGCGCGCTCATCGGCCAACTGGATGCGACG ACGAAGCACCGCGCCGCCTGGTGGTACGGCTTCTATTTCTTCGCCGGCCTGTCCGCGCTGGCCAAGGGCCTGCTGGGCGT GGGCCTGCCCGCCGTCATCCTGGTGTTGTACGCGGCCCTGTCCGTCATTCCCTGGGACAGCGACAGCCTGGACGCACACC TGAAGTGGCTCACGCAGTCCCGCTTCCGCAAGGACGTGCGCGAGGGCCGTCAGCCCATGCCCGTGCTGTGGGGGCAGATG TTCAAGATGCACCTGGGCACGGGCATCCTGGTGTTCTTCGCGGTGGCGGGCCCCTGGTACCTGACGCTGTCCCTCTTCGG CTCCGTGGACGATGAGGGCAAGCTCTTCTGGTACCGCTTCTTCGTCCACGACCACCTCAACCGCCTCACGGCGGGCGTGC ACACCACCACGCCGGGTGGCACGTTCATCTACTTCATCGAGCAGGGGGGCTTCGCCATCTTCCCCTGGGTGGCGCTGCTG CCCGGCGCCTTCTCGGTGGTGGCGCGGCTGAAGCTTCGCTCGGAGAAGGCGGCGGACCACCTGGCCATCATCGCGGTGCT GTGGGTGGCCTTCTCCTTCTGGCTGCTGTCGTCCAGCGCCACCAAGTTCCACCACTACGTCTTCCCGGTGCTGCCGGGCG TGGCCGTCCTCCTGGCGCTCTTCATCGACCGGCTGTGGGAGGAGGGCATCTCCGCGCACGCGGTGAGCCTCATCTTCGGG TTCCTGCTCTTCGTCCTGGTGGGGAAGAACATCGCGGAGAACCCGAAGATCTTCACCGACCTGTTCGTCTACAACTACGA CCGGACCTATCCGCAGGACCTGGTGACGAAGCCCATCGCGTTCTTCACCTCGCGCTCGCTGTGGACGGGAGATTTGGTGA CGCTGGTGCTGCTGGCCTTCGGCGTCTACCTGTCCTTCGATGCCTTCTCCGCGAAGGGGCGGGCGCGGACGACGCCGAGC GCGCGCGCCGTGGCGTTGATGCTGCTCCTGGGCGGCGTGGCGACGCTGGGCGCGGTGAGCGCCCAGGCCCAGGTGTCCGC CAAGGCGCTGGTGGGCGTAGCGGTGCTGGCGGTGGCTGGTTATCTGGCATGGGAGTCCATGCGGCCGGGCGCGGAGGGGC GCGCGTCGCTCCAGACACTGGCCGGCGTGCTGGCGGTGGTGGGCATCGCGTTCGCGGTGCGGGGCTTCCGCCAGCCGGCG GCGGAGGACTCGCTGCTCAAGGCGCTGTCGGAGCCCGTCAACATCAAGAAGACGCTGGGCTTCACCTTCGCGGTGGCGGG CGGCATGGCGGTGGTGGCGTCGCTGATGCGAGCGCGGGCGATGCTGTTCGGCACCTTCTGGGTGCTCGCGGCGGGCATGG CCCTCTGGTTCAACTGGAGCCACTGGGTGGACCTGTCCCACCACTGGACGCAGCGCGACCTCTTCTGGCGCTACTACGCG CAGCGTCAGGCGGGCGAGCCCATCGTCGCGTACATGATGAACTGGCGCGGCGAGACGTTCTACTCGCAGAACACGGTGGA GCAGTACCGCGTGTCGGACGCGAACGCGCGCATGCGCGCCCTGGCGCAGCGGCCGGGTCGTGAGTGGGCCCTGGTGGAGC ACAACCGGCTCAACCTGCTGCGCACCGCGGTGGGCTCGGACAAGGTCGTCACGCCGGTGGACCGCGACATCAACAACAAG TTCGTCCTGGTGACCATCGATTGA
Upstream 100 bases:
>100_bases GCAGCGGGAGCAGACTTTCGCCGAGGCCATCCTCGGCAAGGACTTCTTCCAGGCGAAGTGGGCGAAGCGGTGGCTGGAGC TGTCCCTCAGTCTGCGCGTC
Downstream 100 bases:
>100_bases GCGGCATCCACGTCCAGGACCTGGGCAAGCGCTTCGGAGACCGGGTGGCCGTGGAGGCGTTGTCCTTCCACGTGCGGCCC GGCGAGGTATTCGGCCTGCT
Product: dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MTATAGFAALLFLPYLGAVGLWDPWETHYGEVARMMIVRQDYVYPFWESSWFFSKPPLTMWMQALGMNVVGAANPGGMLG LYTEWGMRMPFALLSITAVALLSLAVARVVSRRAGLATGFVLATMPLYFLLTRQTVTDTPFVTTFICAMACALIGQLDAT TKHRAAWWYGFYFFAGLSALAKGLLGVGLPAVILVLYAALSVIPWDSDSLDAHLKWLTQSRFRKDVREGRQPMPVLWGQM FKMHLGTGILVFFAVAGPWYLTLSLFGSVDDEGKLFWYRFFVHDHLNRLTAGVHTTTPGGTFIYFIEQGGFAIFPWVALL PGAFSVVARLKLRSEKAADHLAIIAVLWVAFSFWLLSSSATKFHHYVFPVLPGVAVLLALFIDRLWEEGISAHAVSLIFG FLLFVLVGKNIAENPKIFTDLFVYNYDRTYPQDLVTKPIAFFTSRSLWTGDLVTLVLLAFGVYLSFDAFSAKGRARTTPS ARAVALMLLLGGVATLGAVSAQAQVSAKALVGVAVLAVAGYLAWESMRPGAEGRASLQTLAGVLAVVGIAFAVRGFRQPA AEDSLLKALSEPVNIKKTLGFTFAVAGGMAVVASLMRARAMLFGTFWVLAAGMALWFNWSHWVDLSHHWTQRDLFWRYYA QRQAGEPIVAYMMNWRGETFYSQNTVEQYRVSDANARMRALAQRPGREWALVEHNRLNLLRTAVGSDKVVTPVDRDINNK FVLVTID
Sequences:
>Translated_727_residues MTATAGFAALLFLPYLGAVGLWDPWETHYGEVARMMIVRQDYVYPFWESSWFFSKPPLTMWMQALGMNVVGAANPGGMLG LYTEWGMRMPFALLSITAVALLSLAVARVVSRRAGLATGFVLATMPLYFLLTRQTVTDTPFVTTFICAMACALIGQLDAT TKHRAAWWYGFYFFAGLSALAKGLLGVGLPAVILVLYAALSVIPWDSDSLDAHLKWLTQSRFRKDVREGRQPMPVLWGQM FKMHLGTGILVFFAVAGPWYLTLSLFGSVDDEGKLFWYRFFVHDHLNRLTAGVHTTTPGGTFIYFIEQGGFAIFPWVALL PGAFSVVARLKLRSEKAADHLAIIAVLWVAFSFWLLSSSATKFHHYVFPVLPGVAVLLALFIDRLWEEGISAHAVSLIFG FLLFVLVGKNIAENPKIFTDLFVYNYDRTYPQDLVTKPIAFFTSRSLWTGDLVTLVLLAFGVYLSFDAFSAKGRARTTPS ARAVALMLLLGGVATLGAVSAQAQVSAKALVGVAVLAVAGYLAWESMRPGAEGRASLQTLAGVLAVVGIAFAVRGFRQPA AEDSLLKALSEPVNIKKTLGFTFAVAGGMAVVASLMRARAMLFGTFWVLAAGMALWFNWSHWVDLSHHWTQRDLFWRYYA QRQAGEPIVAYMMNWRGETFYSQNTVEQYRVSDANARMRALAQRPGREWALVEHNRLNLLRTAVGSDKVVTPVDRDINNK FVLVTID >Mature_726_residues TATAGFAALLFLPYLGAVGLWDPWETHYGEVARMMIVRQDYVYPFWESSWFFSKPPLTMWMQALGMNVVGAANPGGMLGL YTEWGMRMPFALLSITAVALLSLAVARVVSRRAGLATGFVLATMPLYFLLTRQTVTDTPFVTTFICAMACALIGQLDATT KHRAAWWYGFYFFAGLSALAKGLLGVGLPAVILVLYAALSVIPWDSDSLDAHLKWLTQSRFRKDVREGRQPMPVLWGQMF KMHLGTGILVFFAVAGPWYLTLSLFGSVDDEGKLFWYRFFVHDHLNRLTAGVHTTTPGGTFIYFIEQGGFAIFPWVALLP GAFSVVARLKLRSEKAADHLAIIAVLWVAFSFWLLSSSATKFHHYVFPVLPGVAVLLALFIDRLWEEGISAHAVSLIFGF LLFVLVGKNIAENPKIFTDLFVYNYDRTYPQDLVTKPIAFFTSRSLWTGDLVTLVLLAFGVYLSFDAFSAKGRARTTPSA RAVALMLLLGGVATLGAVSAQAQVSAKALVGVAVLAVAGYLAWESMRPGAEGRASLQTLAGVLAVVGIAFAVRGFRQPAA EDSLLKALSEPVNIKKTLGFTFAVAGGMAVVASLMRARAMLFGTFWVLAAGMALWFNWSHWVDLSHHWTQRDLFWRYYAQ RQAGEPIVAYMMNWRGETFYSQNTVEQYRVSDANARMRALAQRPGREWALVEHNRLNLLRTAVGSDKVVTPVDRDINNKF VLVTID
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=379, Percent_Identity=24.0105540897098, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 80521; Mature: 80390
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAGFAALLFLPYLGAVGLWDPWETHYGEVARMMIVRQDYVYPFWESSWFFSKPPLTM CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH WMQALGMNVVGAANPGGMLGLYTEWGMRMPFALLSITAVALLSLAVARVVSRRAGLATGF HHHHHCCCEEECCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLATMPLYFLLTRQTVTDTPFVTTFICAMACALIGQLDATTKHRAAWWYGFYFFAGLSAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AKGLLGVGLPAVILVLYAALSVIPWDSDSLDAHLKWLTQSRFRKDVREGRQPMPVLWGQM HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FKMHLGTGILVFFAVAGPWYLTLSLFGSVDDEGKLFWYRFFVHDHLNRLTAGVHTTTPGG HHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC TFIYFIEQGGFAIFPWVALLPGAFSVVARLKLRSEKAADHLAIIAVLWVAFSFWLLSSSA EEEEEEECCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKFHHYVFPVLPGVAVLLALFIDRLWEEGISAHAVSLIFGFLLFVLVGKNIAENPKIFTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LFVYNYDRTYPQDLVTKPIAFFTSRSLWTGDLVTLVLLAFGVYLSFDAFSAKGRARTTPS HEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ARAVALMLLLGGVATLGAVSAQAQVSAKALVGVAVLAVAGYLAWESMRPGAEGRASLQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AGVLAVVGIAFAVRGFRQPAAEDSLLKALSEPVNIKKTLGFTFAVAGGMAVVASLMRARA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH MLFGTFWVLAAGMALWFNWSHWVDLSHHWTQRDLFWRYYAQRQAGEPIVAYMMNWRGETF HHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC YSQNTVEQYRVSDANARMRALAQRPGREWALVEHNRLNLLRTAVGSDKVVTPVDRDINNK CCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEECCCCCCCCCC FVLVTID EEEEEEC >Mature Secondary Structure TATAGFAALLFLPYLGAVGLWDPWETHYGEVARMMIVRQDYVYPFWESSWFFSKPPLTM CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH WMQALGMNVVGAANPGGMLGLYTEWGMRMPFALLSITAVALLSLAVARVVSRRAGLATGF HHHHHCCCEEECCCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VLATMPLYFLLTRQTVTDTPFVTTFICAMACALIGQLDATTKHRAAWWYGFYFFAGLSAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AKGLLGVGLPAVILVLYAALSVIPWDSDSLDAHLKWLTQSRFRKDVREGRQPMPVLWGQM HHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FKMHLGTGILVFFAVAGPWYLTLSLFGSVDDEGKLFWYRFFVHDHLNRLTAGVHTTTPGG HHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC TFIYFIEQGGFAIFPWVALLPGAFSVVARLKLRSEKAADHLAIIAVLWVAFSFWLLSSSA EEEEEEECCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKFHHYVFPVLPGVAVLLALFIDRLWEEGISAHAVSLIFGFLLFVLVGKNIAENPKIFTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LFVYNYDRTYPQDLVTKPIAFFTSRSLWTGDLVTLVLLAFGVYLSFDAFSAKGRARTTPS HEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ARAVALMLLLGGVATLGAVSAQAQVSAKALVGVAVLAVAGYLAWESMRPGAEGRASLQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AGVLAVVGIAFAVRGFRQPAAEDSLLKALSEPVNIKKTLGFTFAVAGGMAVVASLMRARA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH MLFGTFWVLAAGMALWFNWSHWVDLSHHWTQRDLFWRYYAQRQAGEPIVAYMMNWRGETF HHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC YSQNTVEQYRVSDANARMRALAQRPGREWALVEHNRLNLLRTAVGSDKVVTPVDRDINNK CCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEECCCCCCCCCC FVLVTID EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA