| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759244
Identifier: 108759244
GI number: 108759244
Start: 6013836
End: 6015860
Strand: Direct
Name: 108759244
Synonym: MXAN_4806
Alternate gene names: NA
Gene position: 6013836-6015860 (Clockwise)
Preceding gene: 108760818
Following gene: 108759346
Centisome position: 65.8
GC content: 71.7
Gene sequence:
>2025_bases ATGCCTCCCTCCCTGGAACAGCTTCGTGAACGTGCCCTCCCCTGGGCCGAGCCCGTGCCGGGGGCGTCCCCGGCCGGCGT GCAGGCGAAGCACGAGCCCGCATACGAGGCCGTCGCGCTGGAAGTCGCGAAGTTGGAGTCTCCGGCCAGCAACGCCGTGC GCTGGGATGACGTCGTCGAGGGCGCCAGCGAGCTGCTGAAGCACACCACCAAGGACCTCTGGCTCGCCTCGTACATGGCC TATGGCCTGTATGCCACGCGAGGCCTGGACGGCGCGGCCACCGGCACGGCCGTGCTCGCCGAGGTGACGGAGCGCTACTG GCAGGACCTCTTCCCGGAGGCGAAGCGGCTGCGCGGCCGAGCCAACGCCGTGGCCTGGTTCGTGGACCGGCTGGGCCGCA TCCTGCCCACCGTAGACCAGGCCTCCGTGAGCGCGGAGCCCCTGGATGCGCTGGCGGTCGCGGTGAAGCGCCTGGCCCAG CTCTCACGCGAGCGGTTCTCCGACATGGCCCCCGCGTTCGGGCCGCTCCAGGATGCCATCGCCCGGCTCCGCGCCGGACT CCCCGAGCCCGAACCCGAGAGCGTACCGGATGGACGCACCGCGTCCTCGGAGGACGCAGACGCCTCGCAGCCGCCGGTGG ATGGGACTGCGTCGTCCCAGGACGAGGACACCCCGTCCGGCGAGGATGGAGAGACCGTTGTGCGCGCGGCGGACTCCGCG AATGGCACGCGGCCAGGAGCGCCTTCGGACAGCGCTGAAACGCCCACGAACGGCAATGGCAACCGCTCCGCTCGGGAGGC GGGCAATGCCAGCGCCAACGGCAAACCTGCTCAAGCCAACGGTGCTGGAAACAGCGCCGCCCCGGGTAAAGGCAACACCG CCCCGGGCAATCCCACGGCGAAGAACGCCCCCGCCCCGGCCAAAATCAGCACCGCTCAGGGCACCGCCAAAGCCAGCGCA GCCAGCCAGGGCGGCGCCTCCGCCAACGGCACACCCGCACCACCGCGCGCCGCCATCGAAGTCCCGCCCCTCCCCGAGCT TCCCGCCGCCCCGGATCTGTCCAGCGTGGAGGCGATCACCGACTTCCTGCGCACCGTGGGCGGCGCGCTGCTGGGAGCCG CGGGCGCGCTGCGCCGGGCCAGCCCCGAGGATCCGCTCTCCTACCGCCTCAACCGCATGGGCCTGTGGTTGCACCTGACC CAGCCGCCCGCCACGGATGGCAATGGCCGCACCCAGATTCACCCACTGCCGGACCTGCTGGGAACCAAGCTGGAGACCCT GGAGCAGAACCAGCGCTGGGGCGAGCTGCTGGACGAGTCCGAGTCGGCCCTGGCCCGCCACCGCTTCACGCTGACGCTCC ACCGGTACAGCGCCACCGCCCTGGAGGGGCTGGGTGCCGCGTACGCCGGGGCTCGCACCGCGCTGGTACAGGAATTGGCC ATCCAGCTCCGCCGCATGACCGGCGTGGAGACGCTCATCTCCACCTTGGGAAGCCCGCTCACGGACGACGCCACCCAGGA CTGGCTGCGCGACCACGTCCTCCGCGCGAGCGCGCCCCCACCCGCCCCTTCCGCCGCCGTGGCGTCGGTGTCCACGACCC TGGCGCTGGGGCCCCTGTCGCTGGGCCCGTCTGTCCATGCCGACAGCGCGGCGCTGGAAGCCGAAGCCCGCACGTTGCTG GAGGAAGGCCGTGTCCACGAAGCTGTCACCCGGTTGCAGGCCGCCGTCGCCGCCGCCAGCACCGGCCGCGCCCGCTTCAT CTCCCGGCTGGAGCTGGCGCGGTTGTGTGCCAATGCGGGCCAGTTGCCGCTCGCGCGCGCCGTCTATGACGCGCTGGACG AAGAGGTCTCCGCCCACGCGCTCGACACCTGGGAGCCAGCGCTCGCCGCCGCGTGTCTGGAGGGGTGGCTGCAAACCCGC ACCGAAGCCGAAAAGGAGTCTGGACCGGTGGCAGTGAAATTTCGAAACCGGTATCGTCGTCTAGCGTTGCTGGACTCTTC CGCCACGCTGCGCGTCGGCGCTTGA
Upstream 100 bases:
>100_bases CAAGGGCCTCACGGCCTCGGCGCGACAGGTCATCGACGCGCCGTCCACCACCCTGGAACAGCTGTTGCAGACGCTTTCGC GCTGAAGCCCCACCACGCCT
Downstream 100 bases:
>100_bases AAGACACCCGTCGTACCGCGGCGAAGCTCTCCCTCATGCGACGCCCGCGTCTTCTACGCAGTTCTCAAGGAGAAAGCCGC AGATGAGCAAAGAGAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: ImpA-Like; ImpA-Related N-Terminal Family Protein; ImpA Domain Protein; Type VI Secretion-Associated Protein Family
Number of amino acids: Translated: 674; Mature: 673
Protein sequence:
>674_residues MPPSLEQLRERALPWAEPVPGASPAGVQAKHEPAYEAVALEVAKLESPASNAVRWDDVVEGASELLKHTTKDLWLASYMA YGLYATRGLDGAATGTAVLAEVTERYWQDLFPEAKRLRGRANAVAWFVDRLGRILPTVDQASVSAEPLDALAVAVKRLAQ LSRERFSDMAPAFGPLQDAIARLRAGLPEPEPESVPDGRTASSEDADASQPPVDGTASSQDEDTPSGEDGETVVRAADSA NGTRPGAPSDSAETPTNGNGNRSAREAGNASANGKPAQANGAGNSAAPGKGNTAPGNPTAKNAPAPAKISTAQGTAKASA ASQGGASANGTPAPPRAAIEVPPLPELPAAPDLSSVEAITDFLRTVGGALLGAAGALRRASPEDPLSYRLNRMGLWLHLT QPPATDGNGRTQIHPLPDLLGTKLETLEQNQRWGELLDESESALARHRFTLTLHRYSATALEGLGAAYAGARTALVQELA IQLRRMTGVETLISTLGSPLTDDATQDWLRDHVLRASAPPPAPSAAVASVSTTLALGPLSLGPSVHADSAALEAEARTLL EEGRVHEAVTRLQAAVAAASTGRARFISRLELARLCANAGQLPLARAVYDALDEEVSAHALDTWEPALAAACLEGWLQTR TEAEKESGPVAVKFRNRYRRLALLDSSATLRVGA
Sequences:
>Translated_674_residues MPPSLEQLRERALPWAEPVPGASPAGVQAKHEPAYEAVALEVAKLESPASNAVRWDDVVEGASELLKHTTKDLWLASYMA YGLYATRGLDGAATGTAVLAEVTERYWQDLFPEAKRLRGRANAVAWFVDRLGRILPTVDQASVSAEPLDALAVAVKRLAQ LSRERFSDMAPAFGPLQDAIARLRAGLPEPEPESVPDGRTASSEDADASQPPVDGTASSQDEDTPSGEDGETVVRAADSA NGTRPGAPSDSAETPTNGNGNRSAREAGNASANGKPAQANGAGNSAAPGKGNTAPGNPTAKNAPAPAKISTAQGTAKASA ASQGGASANGTPAPPRAAIEVPPLPELPAAPDLSSVEAITDFLRTVGGALLGAAGALRRASPEDPLSYRLNRMGLWLHLT QPPATDGNGRTQIHPLPDLLGTKLETLEQNQRWGELLDESESALARHRFTLTLHRYSATALEGLGAAYAGARTALVQELA IQLRRMTGVETLISTLGSPLTDDATQDWLRDHVLRASAPPPAPSAAVASVSTTLALGPLSLGPSVHADSAALEAEARTLL EEGRVHEAVTRLQAAVAAASTGRARFISRLELARLCANAGQLPLARAVYDALDEEVSAHALDTWEPALAAACLEGWLQTR TEAEKESGPVAVKFRNRYRRLALLDSSATLRVGA >Mature_673_residues PPSLEQLRERALPWAEPVPGASPAGVQAKHEPAYEAVALEVAKLESPASNAVRWDDVVEGASELLKHTTKDLWLASYMAY GLYATRGLDGAATGTAVLAEVTERYWQDLFPEAKRLRGRANAVAWFVDRLGRILPTVDQASVSAEPLDALAVAVKRLAQL SRERFSDMAPAFGPLQDAIARLRAGLPEPEPESVPDGRTASSEDADASQPPVDGTASSQDEDTPSGEDGETVVRAADSAN GTRPGAPSDSAETPTNGNGNRSAREAGNASANGKPAQANGAGNSAAPGKGNTAPGNPTAKNAPAPAKISTAQGTAKASAA SQGGASANGTPAPPRAAIEVPPLPELPAAPDLSSVEAITDFLRTVGGALLGAAGALRRASPEDPLSYRLNRMGLWLHLTQ PPATDGNGRTQIHPLPDLLGTKLETLEQNQRWGELLDESESALARHRFTLTLHRYSATALEGLGAAYAGARTALVQELAI QLRRMTGVETLISTLGSPLTDDATQDWLRDHVLRASAPPPAPSAAVASVSTTLALGPLSLGPSVHADSAALEAEARTLLE EGRVHEAVTRLQAAVAAASTGRARFISRLELARLCANAGQLPLARAVYDALDEEVSAHALDTWEPALAAACLEGWLQTRT EAEKESGPVAVKFRNRYRRLALLDSSATLRVGA
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70369; Mature: 70238
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSLEQLRERALPWAEPVPGASPAGVQAKHEPAYEAVALEVAKLESPASNAVRWDDVVE CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH GASELLKHTTKDLWLASYMAYGLYATRGLDGAATGTAVLAEVTERYWQDLFPEAKRLRGR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH ANAVAWFVDRLGRILPTVDQASVSAEPLDALAVAVKRLAQLSRERFSDMAPAFGPLQDAI HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARLRAGLPEPEPESVPDGRTASSEDADASQPPVDGTASSQDEDTPSGEDGETVVRAADSA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCC NGTRPGAPSDSAETPTNGNGNRSAREAGNASANGKPAQANGAGNSAAPGKGNTAPGNPTA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNAPAPAKISTAQGTAKASAASQGGASANGTPAPPRAAIEVPPLPELPAAPDLSSVEAIT CCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH DFLRTVGGALLGAAGALRRASPEDPLSYRLNRMGLWLHLTQPPATDGNGRTQIHPLPDLL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCEEECCCHHHH GTKLETLEQNQRWGELLDESESALARHRFTLTLHRYSATALEGLGAAYAGARTALVQELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IQLRRMTGVETLISTLGSPLTDDATQDWLRDHVLRASAPPPAPSAAVASVSTTLALGPLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCC LGPSVHADSAALEAEARTLLEEGRVHEAVTRLQAAVAAASTGRARFISRLELARLCANAG CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC QLPLARAVYDALDEEVSAHALDTWEPALAAACLEGWLQTRTEAEKESGPVAVKFRNRYRR CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHE LALLDSSATLRVGA EEEECCCCCEEECC >Mature Secondary Structure PPSLEQLRERALPWAEPVPGASPAGVQAKHEPAYEAVALEVAKLESPASNAVRWDDVVE CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH GASELLKHTTKDLWLASYMAYGLYATRGLDGAATGTAVLAEVTERYWQDLFPEAKRLRGR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH ANAVAWFVDRLGRILPTVDQASVSAEPLDALAVAVKRLAQLSRERFSDMAPAFGPLQDAI HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ARLRAGLPEPEPESVPDGRTASSEDADASQPPVDGTASSQDEDTPSGEDGETVVRAADSA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCC NGTRPGAPSDSAETPTNGNGNRSAREAGNASANGKPAQANGAGNSAAPGKGNTAPGNPTA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KNAPAPAKISTAQGTAKASAASQGGASANGTPAPPRAAIEVPPLPELPAAPDLSSVEAIT CCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHH DFLRTVGGALLGAAGALRRASPEDPLSYRLNRMGLWLHLTQPPATDGNGRTQIHPLPDLL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCCCCCCCCCEEECCCHHHH GTKLETLEQNQRWGELLDESESALARHRFTLTLHRYSATALEGLGAAYAGARTALVQELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IQLRRMTGVETLISTLGSPLTDDATQDWLRDHVLRASAPPPAPSAAVASVSTTLALGPLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCC LGPSVHADSAALEAEARTLLEEGRVHEAVTRLQAAVAAASTGRARFISRLELARLCANAG CCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC QLPLARAVYDALDEEVSAHALDTWEPALAAACLEGWLQTRTEAEKESGPVAVKFRNRYRR CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHE LALLDSSATLRVGA EEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA