| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758554
Identifier: 108758554
GI number: 108758554
Start: 5572854
End: 5573255
Strand: Direct
Name: 108758554
Synonym: MXAN_4503
Alternate gene names: NA
Gene position: 5572854-5573255 (Clockwise)
Preceding gene: 108757553
Following gene: 108763644
Centisome position: 60.97
GC content: 70.9
Gene sequence:
>402_bases ATGAGCCCGAAGCCTCCCGACAGGCGCCCTCCCGTGGGCTTTCCGCTGCGGCTCGTGCCGGACGAACGCGGCGAGCTGGC GTTTCCTTCGCTAGAAGCCAGCGTGCGGCAGTCCATCGAGGTCATCCTCCGCACGCGCCCCGGCGAGCAGCTCATGCGAC AGGGCTTCGGCGCCGGGCTGGAGCGGATGGTGGGACAACCCAACACCGTGTCCACCCGCCGGCGCATCCAGGAGCTGGTG CAGCGCGCGCTCACCGAGTGGGAGCCGCGCCTGGAACTCATCCGCGTGGACGTGCTGGAGCTGGCGGACCTGCCCGCCCA GGTCCGCGTGGAAATCGTCTACCGCCTGCGCCGCACGGGTGACGTGCAGCAGCTCGGGCTCGCCATGGACCTCGGAGGCT AG
Upstream 100 bases:
>100_bases CTGTCGCTGCTGAACATCGTCTTCTTCTGGATTGCCCTCATCAAGATCTGCATCCCCATTCCCGCCTCGCTGCGCGAGCG GTTCGAGGACTGACCGCGCC
Downstream 100 bases:
>100_bases ATGCCCATCATTCCTCCCCGACTCGACGACAGGAGCTTCCCGGACCTCGTCGAGGAGCTGCTCTCCCGCATCCCGGGCCA TACCCCGGAGTGGACCCATG
Product: baseplate assembly protein W
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein W; Baseplate Assembly Protein W
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSPKPPDRRPPVGFPLRLVPDERGELAFPSLEASVRQSIEVILRTRPGEQLMRQGFGAGLERMVGQPNTVSTRRRIQELV QRALTEWEPRLELIRVDVLELADLPAQVRVEIVYRLRRTGDVQQLGLAMDLGG
Sequences:
>Translated_133_residues MSPKPPDRRPPVGFPLRLVPDERGELAFPSLEASVRQSIEVILRTRPGEQLMRQGFGAGLERMVGQPNTVSTRRRIQELV QRALTEWEPRLELIRVDVLELADLPAQVRVEIVYRLRRTGDVQQLGLAMDLGG >Mature_132_residues SPKPPDRRPPVGFPLRLVPDERGELAFPSLEASVRQSIEVILRTRPGEQLMRQGFGAGLERMVGQPNTVSTRRRIQELVQ RALTEWEPRLELIRVDVLELADLPAQVRVEIVYRLRRTGDVQQLGLAMDLGG
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15060; Mature: 14929
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKPPDRRPPVGFPLRLVPDERGELAFPSLEASVRQSIEVILRTRPGEQLMRQGFGAGL CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH ERMVGQPNTVSTRRRIQELVQRALTEWEPRLELIRVDVLELADLPAQVRVEIVYRLRRTG HHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC DVQQLGLAMDLGG CHHHHHHHHCCCC >Mature Secondary Structure SPKPPDRRPPVGFPLRLVPDERGELAFPSLEASVRQSIEVILRTRPGEQLMRQGFGAGL CCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHH ERMVGQPNTVSTRRRIQELVQRALTEWEPRLELIRVDVLELADLPAQVRVEIVYRLRRTG HHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC DVQQLGLAMDLGG CHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA