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The map label for this gene is cseB [H]

Identifier: 108758497

GI number: 108758497

Start: 7020099

End: 7020500

Strand: Reverse

Name: cseB [H]

Synonym: MXAN_5656

Alternate gene names: 108758497

Gene position: 7020500-7020099 (Counterclockwise)

Preceding gene: 108763794

Following gene: 108761294

Centisome position: 76.81

GC content: 66.67

Gene sequence:

>402_bases
ATGGCTGGCAATTCCCAGGCACCCTTCCACATCCTTCTCGTCGAGGATGAGCCGGTCATCCGGGAGCTGGTTCGCTCCAT
GCTGAGCGACGGCACCGTGGAGGTGGTGTGCGCCGCCACGGGGCTGGAGGGCCTGAAGCTGGCCAAGAGCCAGACGTTCC
ACCTCATCCTGATGGATGTGGTGTTGCCGCAACTGGACGGTATCTCCGTGTGCCGCATCCTCAAGGGAGACCCCGTTACC
GCGGGGGTGCCGCTCTACATGCTCACCGCGAAGGCGAAGCGCTCCGACATGGAGAGCGCCACCCAGGCGGGGGCGGACGG
CTACATCCACAAGCCCTTCCGGGGGGCCGAGCTGATGGCGCTGGTGGAGCGGCTGCGCGAAGCGAGGCCGAAGCTGCCCT
GA

Upstream 100 bases:

>100_bases
CATTGCACAATCCGTTGCATCCTCCCTGGTGCGGCTACGCCCCGGAGGGCTATACCGCGCGCGGCGGGTGGCATTGGCAT
CGTGTTGCGTCCGGAGAACC

Downstream 100 bases:

>100_bases
GTCAGGCGGGCTTCAGGGCAGGCGCGGGTGGAGGTAGCGCGCCAGGGCGATGAGGTCGTCCCAGTCCAGCTCGCCGAACT
CCAGCGCCACTCCGTCCACT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAGNSQAPFHILLVEDEPVIRELVRSMLSDGTVEVVCAATGLEGLKLAKSQTFHLILMDVVLPQLDGISVCRILKGDPVT
AGVPLYMLTAKAKRSDMESATQAGADGYIHKPFRGAELMALVERLREARPKLP

Sequences:

>Translated_133_residues
MAGNSQAPFHILLVEDEPVIRELVRSMLSDGTVEVVCAATGLEGLKLAKSQTFHLILMDVVLPQLDGISVCRILKGDPVT
AGVPLYMLTAKAKRSDMESATQAGADGYIHKPFRGAELMALVERLREARPKLP
>Mature_132_residues
AGNSQAPFHILLVEDEPVIRELVRSMLSDGTVEVVCAATGLEGLKLAKSQTFHLILMDVVLPQLDGISVCRILKGDPVTA
GVPLYMLTAKAKRSDMESATQAGADGYIHKPFRGAELMALVERLREARPKLP

Specific function: Member of the two-component regulatory system CseB/CseC involved in the stability of the cell envelope. CseB activates transcription of RNA polymerase sigma-E factor, in response to changes in the cell envelope [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=34.1880341880342, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1788191, Length=124, Percent_Identity=31.4516129032258, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI1786911, Length=119, Percent_Identity=39.4957983193277, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1786784, Length=115, Percent_Identity=34.7826086956522, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1786599, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1787229, Length=130, Percent_Identity=32.3076923076923, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI87082012, Length=118, Percent_Identity=33.8983050847458, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1788394, Length=123, Percent_Identity=32.520325203252, Blast_Score=62, Evalue=9e-12,
Organism=Escherichia coli, GI1790863, Length=113, Percent_Identity=35.3982300884956, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789149, Length=122, Percent_Identity=29.5081967213115, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 14396; Mature: 14265

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNSQAPFHILLVEDEPVIRELVRSMLSDGTVEVVCAATGLEGLKLAKSQTFHLILMDV
CCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHH
VLPQLDGISVCRILKGDPVTAGVPLYMLTAKAKRSDMESATQAGADGYIHKPFRGAELMA
HHCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEECCCCCHHHHH
LVERLREARPKLP
HHHHHHHHCCCCC
>Mature Secondary Structure 
AGNSQAPFHILLVEDEPVIRELVRSMLSDGTVEVVCAATGLEGLKLAKSQTFHLILMDV
CCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHH
VLPQLDGISVCRILKGDPVTAGVPLYMLTAKAKRSDMESATQAGADGYIHKPFRGAELMA
HHCCCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEECCCCCHHHHH
LVERLREARPKLP
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]