| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758074
Identifier: 108758074
GI number: 108758074
Start: 6883465
End: 6885405
Strand: Reverse
Name: 108758074
Synonym: MXAN_5535
Alternate gene names: NA
Gene position: 6885405-6883465 (Counterclockwise)
Preceding gene: 108758685
Following gene: 108758201
Centisome position: 75.33
GC content: 50.08
Gene sequence:
>1941_bases ATGCTAACGAAGGTGATTGTCGAGAATTTTCGCGGGTTTCATTCATTTACAGCAAACTTCCAAGAAACCAATGTGCTGGT TGGTCCAAACAATGCTGGAAAAACAACGCTCATGTCAGCCATTCGCTTTGCGTGCGCGGCATATTCCTGGGTTCTGCAGG AAGGCCGCGTTCGTGAGTTTAGGGAATTTCAATCTCAATGCAAAGATGATTATATACGCATCGACCCACTGGTTTTCTTG GGGCTCAAGACTCTTCTTTGGATTTCTGTGGAGGAGCTAAGTGAGCTCTATTTTGATCCAGACGACTCATTTAGAATTGA GCTGCATTTCTCTGAGGAGAGCCTGATTGGGCATTTCATTCTCAATGTAGATGACTCGGGGAATGTTGACGTCAAAGTCT GTAGTCCAAAGGTTTTAGCCGAGGTTCAGGGACTCGAATATGGTACGCACAAACGTGCGCGTCGCATTCTAGAGTTGCTC CGGGAGAATGAGCCCGTTGCCGTATTCATACCTATCTTTCCAGGTGCGGGCCCCAATGAAGAGTATCGAAGCACTCATGC AGTTGAGCGAATGATGATGCGAGGGCAGCAGAGTCAGATAATCCGAAACTTGGTTGTTCGTCTCGACAGAGCGGGCCTCG CGCGCTTGAATCGACTCCTTAGGGAATCCGTAGGAGCAACGATTAGTTCATTCACTTCGAAATCGGATTTCGATCGGGTC GAAAACCTGAAGGTGTATTTTCGAGATCAGGAAGGGGAGCTTGAGCTCGCTTCAGCAGGAGCGGGTTTCAGTAGTCTGAT TGCAATATTTTCTGCCCTCTGGCGATACCGAAAATCAATCGTCGAGCGGCGTCCAGTCTTCTTGCTCCTCGATGAGCCAG AAGCACATCTTCATCCGCGCCTTCAGGGGGTTGTTGCCATGTACTTGGCTGAGCTTTCCCGCGAACTGGGGGCGCAACTC TTTATTGCGACCCATTCAGTCGAGGCAATAAATCGGCTCGCACGCCGATCCGATACGTCGCTTCTAGTTGTGGATAAGAA AGCGACATCTGCAAATATTCTTGCTTCTGAAGGTGTGCTTCTTGACGAACTGGGGCGTTGGTGTGATCTTAGTCTGTTTT CAAGTATTCAGTTTCTGCGCTCGAGAAAAATATTGTTTTACGAAGGTCCAAGCGACGCAGAACTCCTTAGGCAGTGTGCA GAAGTCTATTTTCGGGGACAGCCTAAGTTGCTGGCTCGATTTGGAGCCTGGACGTTTGTTCCACTTGGTGGTGCGGGGAA CTCTGCCGCAACGAGTGTGCTTATGCAGGCACTTCGCCCCTTGCTTTCGGTAGAGGGCCGCTCGGGTAATCCAGTGCACA TTGTTCGTGTGTTGGATCGAGACTATAGCCGTTCTCCTGCGTTGGGTCCCTTTAGGGAGGAGTCTGGCTTTAGATTGCTT GATGTAGTTTGGTCGCGACATAGTATCGAATCTTTATTTCTCGACGCTTCGTGTCTGCTTGGCTGGATTTCGCCAGTGAT TTTCGGACACCGAAAGGGCGAACAGTGGGTCTCTAGTCGGGAATTGACTGACATCGTTGTCGCTTCGCTCGGTTGTGCCG ATCGGGATGAGCAACTTTTGATGGAGGCTACTGGGCAGTTGATGATAGCCTTGGCTCGAACGAAGAGGGATGACAGTACG CTAGTGAATGCTCTCGAACAGGCAAAGAGCGAGGTTGGTGCTCGTCCCGATGTTTGGCAAAGAGGTCGGAGTCGCGCAAA GGTTGTTCTAAGCGAAATTCGGAGTCGCCTTCCGTTGATGCTGCAAAATTGTATCCGTCGAGATGTGGTTCAGATGGTGG CTCATGGGTGGGGAGACGTTGCGCAGAGTGATGTAGAGCGGTTGGTTCCTTTGGAGATACGGAAGTTGCTTGATTATTTG ACTACGTGTGACGATTGCTAA
Upstream 100 bases:
>100_bases GCTCTCCGCTCCCAAGTTCAGAAAGAATCCAGTCTATCCCGCCAATGCCATTGAGTATTTCAGTGATGTCCCGGAGTAGT AAATAGAGGAGCTTGCCTAG
Downstream 100 bases:
>100_bases AGACACCCAAAGAAGACCAGGGGTGAACTAACACTGCTCGGTCAGATAAATCAGGCGTGGCGGCCCCGTGTTGATGGGAC ATGACGCCCGCGCAACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREFREFQSQCKDDYIRIDPLVFL GLKTLLWISVEELSELYFDPDDSFRIELHFSEESLIGHFILNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELL RENEPVAVFIPIFPGAGPNEEYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFTSKSDFDRV ENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPVFLLLDEPEAHLHPRLQGVVAMYLAELSRELGAQL FIATHSVEAINRLARRSDTSLLVVDKKATSANILASEGVLLDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCA EVYFRGQPKLLARFGAWTFVPLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGPFREESGFRLL DVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASLGCADRDEQLLMEATGQLMIALARTKRDDST LVNALEQAKSEVGARPDVWQRGRSRAKVVLSEIRSRLPLMLQNCIRRDVVQMVAHGWGDVAQSDVERLVPLEIRKLLDYL TTCDDC
Sequences:
>Translated_646_residues MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREFREFQSQCKDDYIRIDPLVFL GLKTLLWISVEELSELYFDPDDSFRIELHFSEESLIGHFILNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELL RENEPVAVFIPIFPGAGPNEEYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFTSKSDFDRV ENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPVFLLLDEPEAHLHPRLQGVVAMYLAELSRELGAQL FIATHSVEAINRLARRSDTSLLVVDKKATSANILASEGVLLDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCA EVYFRGQPKLLARFGAWTFVPLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGPFREESGFRLL DVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASLGCADRDEQLLMEATGQLMIALARTKRDDST LVNALEQAKSEVGARPDVWQRGRSRAKVVLSEIRSRLPLMLQNCIRRDVVQMVAHGWGDVAQSDVERLVPLEIRKLLDYL TTCDDC >Mature_646_residues MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREFREFQSQCKDDYIRIDPLVFL GLKTLLWISVEELSELYFDPDDSFRIELHFSEESLIGHFILNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELL RENEPVAVFIPIFPGAGPNEEYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFTSKSDFDRV ENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPVFLLLDEPEAHLHPRLQGVVAMYLAELSRELGAQL FIATHSVEAINRLARRSDTSLLVVDKKATSANILASEGVLLDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCA EVYFRGQPKLLARFGAWTFVPLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGPFREESGFRLL DVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASLGCADRDEQLLMEATGQLMIALARTKRDDST LVNALEQAKSEVGARPDVWQRGRSRAKVVLSEIRSRLPLMLQNCIRRDVVQMVAHGWGDVAQSDVERLVPLEIRKLLDYL TTCDDC
Specific function: Unknown
COG id: COG3593
COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72807; Mature: 72807
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREF CHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH REFQSQCKDDYIRIDPLVFLGLKTLLWISVEELSELYFDPDDSFRIELHFSEESLIGHFI HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEE LNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELLRENEPVAVFIPIFPGAGPNE EEECCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH EYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFTSKSDFDRV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH ENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPVFLLLDEPEAHLHPR CCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCHH LQGVVAMYLAELSRELGAQLFIATHSVEAINRLARRSDTSLLVVDKKATSANILASEGVL HHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCC LDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCAEVYFRGQPKLLARFGAWTFV HHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCEEEE PLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGPFREESGFRLL EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH DVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASLGCADRDEQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MEATGQLMIALARTKRDDSTLVNALEQAKSEVGARPDVWQRGRSRAKVVLSEIRSRLPLM HHHHHHHEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHH LQNCIRRDVVQMVAHGWGDVAQSDVERLVPLEIRKLLDYLTTCDDC HHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTKVIVENFRGFHSFTANFQETNVLVGPNNAGKTTLMSAIRFACAAYSWVLQEGRVREF CHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH REFQSQCKDDYIRIDPLVFLGLKTLLWISVEELSELYFDPDDSFRIELHFSEESLIGHFI HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEE LNVDDSGNVDVKVCSPKVLAEVQGLEYGTHKRARRILELLRENEPVAVFIPIFPGAGPNE EEECCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH EYRSTHAVERMMMRGQQSQIIRNLVVRLDRAGLARLNRLLRESVGATISSFTSKSDFDRV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH ENLKVYFRDQEGELELASAGAGFSSLIAIFSALWRYRKSIVERRPVFLLLDEPEAHLHPR CCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCHH LQGVVAMYLAELSRELGAQLFIATHSVEAINRLARRSDTSLLVVDKKATSANILASEGVL HHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCC LDELGRWCDLSLFSSIQFLRSRKILFYEGPSDAELLRQCAEVYFRGQPKLLARFGAWTFV HHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCEEEE PLGGAGNSAATSVLMQALRPLLSVEGRSGNPVHIVRVLDRDYSRSPALGPFREESGFRLL EECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH DVVWSRHSIESLFLDASCLLGWISPVIFGHRKGEQWVSSRELTDIVVASLGCADRDEQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MEATGQLMIALARTKRDDSTLVNALEQAKSEVGARPDVWQRGRSRAKVVLSEIRSRLPLM HHHHHHHEEHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHH LQNCIRRDVVQMVAHGWGDVAQSDVERLVPLEIRKLLDYLTTCDDC HHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA