| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757969
Identifier: 108757969
GI number: 108757969
Start: 6922600
End: 6925101
Strand: Reverse
Name: 108757969
Synonym: MXAN_5573
Alternate gene names: NA
Gene position: 6925101-6922600 (Counterclockwise)
Preceding gene: 108758797
Following gene: 108758680
Centisome position: 75.77
GC content: 67.75
Gene sequence:
>2502_bases ATGGCCGCTCAATTCAATCCGCCTGCGTTCACGGTGCAGGTCGGCTCACACGGCGCGGATGCGCTGAGTGTTTCGAGCAT TTCCGGCACCGAGGCGTTGAGCCACCTGTTCGACTTCCGGGTGGACTTCTTCGCCAAGGATGGCAACCCCATCGCCACCA GCGAGCTGCTGGAGCAGGACGCGTTGCTCACCCTCTCCATCCGCGACAGTGCGCCCCGCTACGTGCACGGCTGGGTCCGC GAGGTGGAATCGCTGGGCATGAAGACGGGCCGCCGCCGCTACCGGGCGCACGTGGTGCCCCGGCTGTGGCGGCTCACCCA GCACCACCGCAGCCGCATCTTCCAGCAGAAGTCCGTGCCGGACATCCTCAAGGACGTCCTGGACGCGGCGGGCGTGAAGA CGCGGCTGGCCCTGTCCGGCAGCTACGCCCCCCGTGAGTACTGCGTGCAGTACCGGGAGAGCGACTTCGCCTTCCTCAGC CGGCTCATGGAGTGGGAGGGCATCTTCTACTTCTTCGAGCACACCGAGGAGGGGCACACCCTGGTGCTGGGGGACAAGCC CAGCGCGCACGCGCCCCTGCCGCAGGGCCAGCAGCTCCCGCTGCGTCCCAGCCTGGGCAAGGAGGTCGTGGAGGGTGAGT ACCTCTCCGCGCTGGAAGTGGTGCACCGGCTGCGCCCCGGCGCCGTGCACCTGAAGGACTTCGACTTCGAGAAGCCAGGC CTGGATATCTCCGGCAAGGCGCAGGCGCCCGAAGGTGTCACGGAGCTGGAGCTCTACGACTATCCGGCGGGCTACGTGGC GCCGGGCGTGGGCAAGGCGGCGACCAACGTGCGCACGGAAGCGGCGAGCATGGGCGGGCGCACGCTGATGGGCCAGGGCG TGGCGCCGCGCCTCACGCCCGGGTACCTGCTGGAGGTGCAGTCCCCGGAGGATGGCACCTTCGCGGGCGAGTACCTGGTG ACGGAGGTGGTGCATTCGGGCACGCAGCCGGACGTCAGCGCGGGCAGCGAGGCGATTCAGGGCCTGTACCGAAATCAGTA CCAGCTGTTGCCCAAGGCCGTGCCCTTCCGGCCCCGGCGCCTGACGCCCTTGCCGCAGCTTGCGGGCCCGCAGACGGCCA CGGTGGTGGGCCCCGCGGGCGAGGAGATTCACACCGACGAGCACGGGCGCATCAAGGTGCAGTTCCACTGGGACCGCGAG GGCAAGCGCGACGAGAAGGCCTCGTGCTGGGTGCGCGTGGGCCAGCCGTGGGGCGGCCCGGCCTGGGGTGACGTGTGGCT GCCGCGCATCGGCCAGGAGGTGGTGGTGCGCTTCCTGGAAGGAGACCCGGACCGGCCGCTGGTGGCGGGCGCCGTCTACA ACGGCACCAACACCGTGCCGTATGGCCTGCCGGGGGAGAAGACGAAGTCCACGCGCAAGAGCGCCTCCAGCCTGGGCAGC GACGGCTTCAACGAGGTCCGCGTCGAGGATGCGGTGGGCCAGGAGGAGGTCTTCACCCACGCGCAGAAGGACGAGGACCT GCTCACGGAGAACGACAAGGACCAGCAGGTGACGGGCTTCGAGGACCTGCTGGTGAAGAAGGACCGCAAGCGCACGGTGG AGGGAAACCAGGAGCTGCGCGTGGGCGTGGACGACGTGGGCGTCGTCGAGCAGAACCAGACGTTGCTGGTGCAGGGCAAC CGCTCCACCCGGACGACGCTGTCTCACGACGAGGAAGTGGAGGGCAACCAGACGATGACGGTGGGCGGTAACCTCACCGG GCTGGTGCTCCAGGGCGCCATGGAGAACGTAGGGGCCGCGAAGGCCACCACCATTGGCGGCGTCTACAGCGTCAACGTGG CGCTTGCCTACAACGAGGCCACCGGCGGCGCGCGCGGCCTCCAGGTCGCCGCCGCGCACACCGAGCACGTGCTGGGTTCG CGGCAGGAGACGGTCGGCAAGGACAAGACGGTGGACGTCGGCATGGACTGGGACTTGCGCACCAAGGGCCAGCTCACGCT GACCATCGGCAAGGACTGGGAAGAGGACATCGGGAAGACCACCAGCCTCTACATCACCGAGGCCATGGCGGGCCTGGCCA AGAAGTTCGAGCTGAAGGCAGACACCTTCTCGCTGCTCGTCGGTGACAACCTCATCCTGAAGATGGAGAAGTCCGGCAAG GTGACCTTCACCCTCAAGACGCTCACCGTCGACGGCAAGGAAGTGAAGATCAAGGGCGGCAAGGTGAAGATGGAGGCGGC TGGTTCGCTCAAGAGCGACTCGCGCAAGGCGAAGGAGCTGGAGCACTTCAAGGAGCCAGACCCCGTCAACGTCGAGTTCA ACCTCAAGGGCATGGACGGCAAGCCCATCAAGGACCAGCCCTTCGAGCTGCACATGCCCGACGGCACCATCAAGAAGGGC CGCGTGGACGGGAGCGGGAAGGGCGTGGTGGAGAAGGTGCCGCCCGGCGACTACCGCGTCGTCTTCCCGGAGATGTCAGG CCGCATCAACAAGGGTTCCTGA
Upstream 100 bases:
>100_bases CGGCATTCCGGGCGAGTGCGCCCACGTACCCAGCGTGTGGTAGAATCTCCCGTTCGTTCCCGGCGAGGCTGGGGACCTCC GCGTCGGTGAAGGGGGAGTC
Downstream 100 bases:
>100_bases GCCGTACCCGCCCGCGCGGGCACACGCGCCATTTCGGATAGGCCAGCGATGGAAACGTACGTCGTCAAGGACGGGGACTC CCCCGACTCAATCGCGCAGA
Product: Rhs element Vgr family protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Vgr Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein
Number of amino acids: Translated: 833; Mature: 832
Protein sequence:
>833_residues MAAQFNPPAFTVQVGSHGADALSVSSISGTEALSHLFDFRVDFFAKDGNPIATSELLEQDALLTLSIRDSAPRYVHGWVR EVESLGMKTGRRRYRAHVVPRLWRLTQHHRSRIFQQKSVPDILKDVLDAAGVKTRLALSGSYAPREYCVQYRESDFAFLS RLMEWEGIFYFFEHTEEGHTLVLGDKPSAHAPLPQGQQLPLRPSLGKEVVEGEYLSALEVVHRLRPGAVHLKDFDFEKPG LDISGKAQAPEGVTELELYDYPAGYVAPGVGKAATNVRTEAASMGGRTLMGQGVAPRLTPGYLLEVQSPEDGTFAGEYLV TEVVHSGTQPDVSAGSEAIQGLYRNQYQLLPKAVPFRPRRLTPLPQLAGPQTATVVGPAGEEIHTDEHGRIKVQFHWDRE GKRDEKASCWVRVGQPWGGPAWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGTNTVPYGLPGEKTKSTRKSASSLGS DGFNEVRVEDAVGQEEVFTHAQKDEDLLTENDKDQQVTGFEDLLVKKDRKRTVEGNQELRVGVDDVGVVEQNQTLLVQGN RSTRTTLSHDEEVEGNQTMTVGGNLTGLVLQGAMENVGAAKATTIGGVYSVNVALAYNEATGGARGLQVAAAHTEHVLGS RQETVGKDKTVDVGMDWDLRTKGQLTLTIGKDWEEDIGKTTSLYITEAMAGLAKKFELKADTFSLLVGDNLILKMEKSGK VTFTLKTLTVDGKEVKIKGGKVKMEAAGSLKSDSRKAKELEHFKEPDPVNVEFNLKGMDGKPIKDQPFELHMPDGTIKKG RVDGSGKGVVEKVPPGDYRVVFPEMSGRINKGS
Sequences:
>Translated_833_residues MAAQFNPPAFTVQVGSHGADALSVSSISGTEALSHLFDFRVDFFAKDGNPIATSELLEQDALLTLSIRDSAPRYVHGWVR EVESLGMKTGRRRYRAHVVPRLWRLTQHHRSRIFQQKSVPDILKDVLDAAGVKTRLALSGSYAPREYCVQYRESDFAFLS RLMEWEGIFYFFEHTEEGHTLVLGDKPSAHAPLPQGQQLPLRPSLGKEVVEGEYLSALEVVHRLRPGAVHLKDFDFEKPG LDISGKAQAPEGVTELELYDYPAGYVAPGVGKAATNVRTEAASMGGRTLMGQGVAPRLTPGYLLEVQSPEDGTFAGEYLV TEVVHSGTQPDVSAGSEAIQGLYRNQYQLLPKAVPFRPRRLTPLPQLAGPQTATVVGPAGEEIHTDEHGRIKVQFHWDRE GKRDEKASCWVRVGQPWGGPAWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGTNTVPYGLPGEKTKSTRKSASSLGS DGFNEVRVEDAVGQEEVFTHAQKDEDLLTENDKDQQVTGFEDLLVKKDRKRTVEGNQELRVGVDDVGVVEQNQTLLVQGN RSTRTTLSHDEEVEGNQTMTVGGNLTGLVLQGAMENVGAAKATTIGGVYSVNVALAYNEATGGARGLQVAAAHTEHVLGS RQETVGKDKTVDVGMDWDLRTKGQLTLTIGKDWEEDIGKTTSLYITEAMAGLAKKFELKADTFSLLVGDNLILKMEKSGK VTFTLKTLTVDGKEVKIKGGKVKMEAAGSLKSDSRKAKELEHFKEPDPVNVEFNLKGMDGKPIKDQPFELHMPDGTIKKG RVDGSGKGVVEKVPPGDYRVVFPEMSGRINKGS >Mature_832_residues AAQFNPPAFTVQVGSHGADALSVSSISGTEALSHLFDFRVDFFAKDGNPIATSELLEQDALLTLSIRDSAPRYVHGWVRE VESLGMKTGRRRYRAHVVPRLWRLTQHHRSRIFQQKSVPDILKDVLDAAGVKTRLALSGSYAPREYCVQYRESDFAFLSR LMEWEGIFYFFEHTEEGHTLVLGDKPSAHAPLPQGQQLPLRPSLGKEVVEGEYLSALEVVHRLRPGAVHLKDFDFEKPGL DISGKAQAPEGVTELELYDYPAGYVAPGVGKAATNVRTEAASMGGRTLMGQGVAPRLTPGYLLEVQSPEDGTFAGEYLVT EVVHSGTQPDVSAGSEAIQGLYRNQYQLLPKAVPFRPRRLTPLPQLAGPQTATVVGPAGEEIHTDEHGRIKVQFHWDREG KRDEKASCWVRVGQPWGGPAWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGTNTVPYGLPGEKTKSTRKSASSLGSD GFNEVRVEDAVGQEEVFTHAQKDEDLLTENDKDQQVTGFEDLLVKKDRKRTVEGNQELRVGVDDVGVVEQNQTLLVQGNR STRTTLSHDEEVEGNQTMTVGGNLTGLVLQGAMENVGAAKATTIGGVYSVNVALAYNEATGGARGLQVAAAHTEHVLGSR QETVGKDKTVDVGMDWDLRTKGQLTLTIGKDWEEDIGKTTSLYITEAMAGLAKKFELKADTFSLLVGDNLILKMEKSGKV TFTLKTLTVDGKEVKIKGGKVKMEAAGSLKSDSRKAKELEHFKEPDPVNVEFNLKGMDGKPIKDQPFELHMPDGTIKKGR VDGSGKGVVEKVPPGDYRVVFPEMSGRINKGS
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91039; Mature: 90908
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQFNPPAFTVQVGSHGADALSVSSISGTEALSHLFDFRVDFFAKDGNPIATSELLEQD CCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCEEEEEECCCCCCHHHHHHCCC ALLTLSIRDSAPRYVHGWVREVESLGMKTGRRRYRAHVVPRLWRLTQHHRSRIFQQKSVP CEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DILKDVLDAAGVKTRLALSGSYAPREYCVQYRESDFAFLSRLMEWEGIFYFFEHTEEGHT HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCE LVLGDKPSAHAPLPQGQQLPLRPSLGKEVVEGEYLSALEVVHRLRPGAVHLKDFDFEKPG EEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCC LDISGKAQAPEGVTELELYDYPAGYVAPGVGKAATNVRTEAASMGGRTLMGQGVAPRLTP CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC GYLLEVQSPEDGTFAGEYLVTEVVHSGTQPDVSAGSEAIQGLYRNQYQLLPKAVPFRPRR CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC LTPLPQLAGPQTATVVGPAGEEIHTDEHGRIKVQFHWDREGKRDEKASCWVRVGQPWGGP CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCC AWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGTNTVPYGLPGEKTKSTRKSASSLGS CCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC DGFNEVRVEDAVGQEEVFTHAQKDEDLLTENDKDQQVTGFEDLLVKKDRKRTVEGNQELR CCCCEEEEHHCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHCCCCHHCCCCCCEEE VGVDDVGVVEQNQTLLVQGNRSTRTTLSHDEEVEGNQTMTVGGNLTGLVLQGAMENVGAA ECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHCCCC KATTIGGVYSVNVALAYNEATGGARGLQVAAAHTEHVLGSRQETVGKDKTVDVGMDWDLR HHEECCCEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCHHHCCCCCEEEECCCCCCC TKGQLTLTIGKDWEEDIGKTTSLYITEAMAGLAKKFELKADTFSLLVGDNLILKMEKSGK CCCEEEEEECCCHHHHHCCCEEEEHHHHHHHHHHHEEECCCEEEEEECCCEEEEEECCCC VTFTLKTLTVDGKEVKIKGGKVKMEAAGSLKSDSRKAKELEHFKEPDPVNVEFNLKGMDG EEEEEEEEEECCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC KPIKDQPFELHMPDGTIKKGRVDGSGKGVVEKVPPGDYRVVFPEMSGRINKGS CCCCCCCEEEECCCCCCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure AAQFNPPAFTVQVGSHGADALSVSSISGTEALSHLFDFRVDFFAKDGNPIATSELLEQD CCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCEEEEEECCCCCCHHHHHHCCC ALLTLSIRDSAPRYVHGWVREVESLGMKTGRRRYRAHVVPRLWRLTQHHRSRIFQQKSVP CEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DILKDVLDAAGVKTRLALSGSYAPREYCVQYRESDFAFLSRLMEWEGIFYFFEHTEEGHT HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCEEEEEEECCCCCE LVLGDKPSAHAPLPQGQQLPLRPSLGKEVVEGEYLSALEVVHRLRPGAVHLKDFDFEKPG EEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCC LDISGKAQAPEGVTELELYDYPAGYVAPGVGKAATNVRTEAASMGGRTLMGQGVAPRLTP CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC GYLLEVQSPEDGTFAGEYLVTEVVHSGTQPDVSAGSEAIQGLYRNQYQLLPKAVPFRPRR CEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC LTPLPQLAGPQTATVVGPAGEEIHTDEHGRIKVQFHWDREGKRDEKASCWVRVGQPWGGP CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCC AWGDVWLPRIGQEVVVRFLEGDPDRPLVAGAVYNGTNTVPYGLPGEKTKSTRKSASSLGS CCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC DGFNEVRVEDAVGQEEVFTHAQKDEDLLTENDKDQQVTGFEDLLVKKDRKRTVEGNQELR CCCCEEEEHHCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHCCCCHHCCCCCCEEE VGVDDVGVVEQNQTLLVQGNRSTRTTLSHDEEVEGNQTMTVGGNLTGLVLQGAMENVGAA ECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHCCCC KATTIGGVYSVNVALAYNEATGGARGLQVAAAHTEHVLGSRQETVGKDKTVDVGMDWDLR HHEECCCEEEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCHHHCCCCCEEEECCCCCCC TKGQLTLTIGKDWEEDIGKTTSLYITEAMAGLAKKFELKADTFSLLVGDNLILKMEKSGK CCCEEEEEECCCHHHHHCCCEEEEHHHHHHHHHHHEEECCCEEEEEECCCEEEEEECCCC VTFTLKTLTVDGKEVKIKGGKVKMEAAGSLKSDSRKAKELEHFKEPDPVNVEFNLKGMDG EEEEEEEEEECCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC KPIKDQPFELHMPDGTIKKGRVDGSGKGVVEKVPPGDYRVVFPEMSGRINKGS CCCCCCCEEEECCCCCCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA