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The map label for this gene is yfbG [C]

Identifier: 108757676

GI number: 108757676

Start: 4084582

End: 4085541

Strand: Direct

Name: yfbG [C]

Synonym: MXAN_3506

Alternate gene names: 108757676

Gene position: 4084582-4085541 (Clockwise)

Preceding gene: 108760076

Following gene: 108760627

Centisome position: 44.69

GC content: 66.88

Gene sequence:

>960_bases
ATGCGTGGGAAGCGGGTAGCGGTCCTGGGCGGCGCCGGCTTCGTCGGGTCGCACCTGTGTGAGCGTCTTCTGGATGACGG
CGCGGCGGCGGTCATCGCCGTGGACAACCTCATCACTGGCAACGAAGAGAACCTGCGCACGCTGAACGGGCGGCCGGGCT
TCTCCTTCGTCAAGGCGGACATCACCGAGCGCATCCCGGTGGAAGGGCCGCTGGACTACGTCTTCAACATGGCCTCGCCG
GCCTCGCCCATCGACTACGCGCAGCTCCCGCTGGAGACGCTGCGTGTGGGCTCCATTGGCACGGAGAACGGGCTGAAGCT
GGCGGAGGCGAACAAGGCGGTGTTCCTGATGGCCTCCACGTCGGAGGTATACGGGGATCCGCTGGTGCATCCGCAGCGCG
AGGACTACTGGGGCAACGTGAATCCCATTGGCCCCCGGTCCGTCTACGACGAGGCCAAGCGCTATTCGGAGGCCATCACC
GCGGCCTACGGGCGCACCAAGGGCGTGCAGGTCCGCATCGTCCGCATCTTCAACACCTACGGTCCGCGCATGCGCCTCAA
TGACGGCCGCGTGGTGCCGGCCTTCGTGGGCCAGGCGCTCAAGGGCGAGGACTTCACCGTCTTCGGGGACGGCAGCCAGA
CGCGCTCGTTCTGTTACGTGAAGGACTTGGTGGACGGGCTGGTCCGGCTGATGCTGTCGGATGAGTCGAACCCGGTGAAC
ATCGGCAACCCCCGGGAGATGACCATCCGTCAGTTCGCGGAGGCCGTGCGCGCGGCGGCGGGTGGGGGTGGGAGCATCAT
CGAGAAGCCGCTGCCCAAGGATGATCCGAAGCAGCGTCAGCCGGACATCACCCGGGCTCGGACGCTGCTGGGCTGGGAGC
CGAAGGTTCCGCTGGAAGAGGGTCTTCGGGAGACCATTGCGTGGTTCCGAGAGGTTGCCGGCACGAAGCCCCCGGCATAG

Upstream 100 bases:

>100_bases
TCCGCCAGGGCATCGACCTGGTCCTGGAGAAGTACAAGGCGCAGTTGCCGGGGCAGTCGACGTTCGACGAGCTGTGAGAG
AGAGGCGTGACGTGAAGAGC

Downstream 100 bases:

>100_bases
TTTGCCGGCGCGAAGATCCTGCATGGCCTGCAGGCGGGAGGTTGCGTGAAGGTCCTGGTGACAGGTGGCGCGGGCTTCAT
TGGCTCGCATGTGTGCGATG

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRGKRVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENLRTLNGRPGFSFVKADITERIPVEGPLDYVFNMASP
ASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAIT
AAYGRTKGVQVRIVRIFNTYGPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGLVRLMLSDESNPVN
IGNPREMTIRQFAEAVRAAAGGGGSIIEKPLPKDDPKQRQPDITRARTLLGWEPKVPLEEGLRETIAWFREVAGTKPPA

Sequences:

>Translated_319_residues
MRGKRVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENLRTLNGRPGFSFVKADITERIPVEGPLDYVFNMASP
ASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAIT
AAYGRTKGVQVRIVRIFNTYGPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGLVRLMLSDESNPVN
IGNPREMTIRQFAEAVRAAAGGGGSIIEKPLPKDDPKQRQPDITRARTLLGWEPKVPLEEGLRETIAWFREVAGTKPPA
>Mature_319_residues
MRGKRVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENLRTLNGRPGFSFVKADITERIPVEGPLDYVFNMASP
ASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMASTSEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAIT
AAYGRTKGVQVRIVRIFNTYGPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGLVRLMLSDESNPVN
IGNPREMTIRQFAEAVRAAAGGGGSIIEKPLPKDDPKQRQPDITRARTLLGWEPKVPLEEGLRETIAWFREVAGTKPPA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=308, Percent_Identity=53.2467532467532, Blast_Score=340, Evalue=1e-93,
Organism=Homo sapiens, GI7657641, Length=327, Percent_Identity=29.0519877675841, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1788589, Length=354, Percent_Identity=29.6610169491525, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI48994969, Length=335, Percent_Identity=27.1641791044776, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788353, Length=343, Percent_Identity=24.7813411078717, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788365, Length=332, Percent_Identity=25.9036144578313, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786974, Length=337, Percent_Identity=26.7062314540059, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788366, Length=354, Percent_Identity=26.271186440678, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=308, Percent_Identity=50.974025974026, Blast_Score=319, Evalue=1e-87,
Organism=Caenorhabditis elegans, GI17568069, Length=327, Percent_Identity=25.6880733944954, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI115532424, Length=324, Percent_Identity=25.6172839506173, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17507723, Length=347, Percent_Identity=25.6484149855908, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6319493, Length=354, Percent_Identity=24.8587570621469, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=53.7459283387622, Blast_Score=340, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34787; Mature: 34787

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKRVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENLRTLNGRPGFSFVKAD
CCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEHH
ITERIPVEGPLDYVFNMASPASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMAST
HHHCCCCCCCHHHHHHCCCCCCCCCHHHCCHHHHHCCCCCCCCCCEEEECCCEEEEEEEC
SEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAITAAYGRTKGVQVRIVRIFNTY
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
GPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGLVRLMLSDESNPVN
CCEEEECCCEEEHHHHCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IGNPREMTIRQFAEAVRAAAGGGGSIIEKPLPKDDPKQRQPDITRARTLLGWEPKVPLEE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHH
GLRETIAWFREVAGTKPPA
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGKRVAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENLRTLNGRPGFSFVKAD
CCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEHH
ITERIPVEGPLDYVFNMASPASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMAST
HHHCCCCCCCHHHHHHCCCCCCCCCHHHCCHHHHHCCCCCCCCCCEEEECCCEEEEEEEC
SEVYGDPLVHPQREDYWGNVNPIGPRSVYDEAKRYSEAITAAYGRTKGVQVRIVRIFNTY
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
GPRMRLNDGRVVPAFVGQALKGEDFTVFGDGSQTRSFCYVKDLVDGLVRLMLSDESNPVN
CCEEEECCCEEEHHHHCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IGNPREMTIRQFAEAVRAAAGGGGSIIEKPLPKDDPKQRQPDITRARTLLGWEPKVPLEE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHH
GLRETIAWFREVAGTKPPA
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]