| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is aroF [H]
Identifier: 108757653
GI number: 108757653
Start: 4106148
End: 4107059
Strand: Reverse
Name: aroF [H]
Synonym: MXAN_3526
Alternate gene names: 108757653
Gene position: 4107059-4106148 (Counterclockwise)
Preceding gene: 108759081
Following gene: 108762368
Centisome position: 44.94
GC content: 70.18
Gene sequence:
>912_bases ATGGGAGGGTCCGTGGGAGGCAAGCGGCCAGACGAACCAGCCGGGTCCGGACGGGCCCCGGGCGCGCTGCGGGTGCTTCG CGTGGAGCGGCCCGAAGGCACTCGCGTGCGAGTGGGCCCCGTGGAAGTCGGAGGCCCCGGGTTCGTCGTAATGGCTGGCC CCTGCGCGGTGGAAGGCGCGGAGCAGGTGCAGCACGCCGCCTCGGTGGTGGCCGCCGCGGGTGCCCATGTCCTGCGCGGT GGCGTATTCAAGCCTCGCACCAGTCCCTACGCATTCCAGGGCATGGGTGAGCCGGGCCTGCACGTCCTGGCGGAGGCCGG GCGCCGCCACGGCATGCCCATCATCAGTGAGGTGATGGAGTCGGCGCAGATTCCCCTCATGGAGGAGTCCACGGACATCC TCCAGGTGGGTGCGCGCAACATGCAGAACTACTCGCTGCTTCGGGCGCTGGGGAAGGTGCGCAAGCCCGTGCTGCTCAAA CGAGGCCTGTCGGCCACGTTGCAGGAGTGGCTGCTGGCCGCCGAGTACATCCTCGACGGCGGCAACGAACAGGTGATGCT GTGCGAGCGCGGCATCCGCACCTTCGAGACGGAGCTGCGCAACACGCTGGACCTGGCGGCGGTGGCCTGGGCGAAGCAGC GCTCCCACCTGCCCGTCATCGTCGACCCGTCCCATGCGACGGGCGACCCGGCGCTCATCCTCCCCATGTCGCTGGCGGCC GCGGCCGCGGGGGCGGACGGATTGTTGATTGAAGTCCACCCGAAGCCCGAGCAGGCCATGTGCGATGGGCACCAGGCCCT GACGCCTGAACGCTTCGAGACGTTGATGCGGCGGCTGCCAGCCGTGCTAGACGCGGTGGACCGACACCTTTGGCGGCCGG AAAGCCCGGCCCAGGTCGTGAGGGCGCGATGA
Upstream 100 bases:
>100_bases GTTCCTCATCGGCGATTGCGTCGCAATCACCTTCGGTTGTCTTCTAAGCCATCTCGGCTATACATGCACCAAGGAGTTCA AAACCTCTTGAACTCCATGA
Downstream 100 bases:
>100_bases GTACTGAAGTCCGTGAGATGTTCTCTTCCATCGCCACGAAGTACGACGTGACGAATGAGGTCCTCTCGTTCGGCATCCAC CGGCTGTGGCGCCGGAAGGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGGSVGGKRPDEPAGSGRAPGALRVLRVERPEGTRVRVGPVEVGGPGFVVMAGPCAVEGAEQVQHAASVVAAAGAHVLRG GVFKPRTSPYAFQGMGEPGLHVLAEAGRRHGMPIISEVMESAQIPLMEESTDILQVGARNMQNYSLLRALGKVRKPVLLK RGLSATLQEWLLAAEYILDGGNEQVMLCERGIRTFETELRNTLDLAAVAWAKQRSHLPVIVDPSHATGDPALILPMSLAA AAAGADGLLIEVHPKPEQAMCDGHQALTPERFETLMRRLPAVLDAVDRHLWRPESPAQVVRAR
Sequences:
>Translated_303_residues MGGSVGGKRPDEPAGSGRAPGALRVLRVERPEGTRVRVGPVEVGGPGFVVMAGPCAVEGAEQVQHAASVVAAAGAHVLRG GVFKPRTSPYAFQGMGEPGLHVLAEAGRRHGMPIISEVMESAQIPLMEESTDILQVGARNMQNYSLLRALGKVRKPVLLK RGLSATLQEWLLAAEYILDGGNEQVMLCERGIRTFETELRNTLDLAAVAWAKQRSHLPVIVDPSHATGDPALILPMSLAA AAAGADGLLIEVHPKPEQAMCDGHQALTPERFETLMRRLPAVLDAVDRHLWRPESPAQVVRAR >Mature_302_residues GGSVGGKRPDEPAGSGRAPGALRVLRVERPEGTRVRVGPVEVGGPGFVVMAGPCAVEGAEQVQHAASVVAAAGAHVLRGG VFKPRTSPYAFQGMGEPGLHVLAEAGRRHGMPIISEVMESAQIPLMEESTDILQVGARNMQNYSLLRALGKVRKPVLLKR GLSATLQEWLLAAEYILDGGNEQVMLCERGIRTFETELRNTLDLAAVAWAKQRSHLPVIVDPSHATGDPALILPMSLAAA AAGADGLLIEVHPKPEQAMCDGHQALTPERFETLMRRLPAVLDAVDRHLWRPESPAQVVRAR
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=277, Percent_Identity=28.158844765343, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 32351; Mature: 32220
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSVGGKRPDEPAGSGRAPGALRVLRVERPEGTRVRVGPVEVGGPGFVVMAGPCAVEGA CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCEEECCCEEEEEECCCCCCHH EQVQHAASVVAAAGAHVLRGGVFKPRTSPYAFQGMGEPGLHVLAEAGRRHGMPIISEVME HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHH SAQIPLMEESTDILQVGARNMQNYSLLRALGKVRKPVLLKRGLSATLQEWLLAAEYILDG HHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC GNEQVMLCERGIRTFETELRNTLDLAAVAWAKQRSHLPVIVDPSHATGDPALILPMSLAA CCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHH AAAGADGLLIEVHPKPEQAMCDGHQALTPERFETLMRRLPAVLDAVDRHLWRPESPAQVV HHCCCCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RAR CCC >Mature Secondary Structure GGSVGGKRPDEPAGSGRAPGALRVLRVERPEGTRVRVGPVEVGGPGFVVMAGPCAVEGA CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCEEECCCEEEEEECCCCCCHH EQVQHAASVVAAAGAHVLRGGVFKPRTSPYAFQGMGEPGLHVLAEAGRRHGMPIISEVME HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHH SAQIPLMEESTDILQVGARNMQNYSLLRALGKVRKPVLLKRGLSATLQEWLLAAEYILDG HHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC GNEQVMLCERGIRTFETELRNTLDLAAVAWAKQRSHLPVIVDPSHATGDPALILPMSLAA CCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHH AAAGADGLLIEVHPKPEQAMCDGHQALTPERFETLMRRLPAVLDAVDRHLWRPESPAQVV HHCCCCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RAR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]