| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pqqL [C]
Identifier: 108757014
GI number: 108757014
Start: 6815045
End: 6817795
Strand: Reverse
Name: pqqL [C]
Synonym: MXAN_5476
Alternate gene names: 108757014
Gene position: 6817795-6815045 (Counterclockwise)
Preceding gene: 108761179
Following gene: 108760060
Centisome position: 74.59
GC content: 71.14
Gene sequence:
>2751_bases ATGTTTCGCCCGCGTGTCTCCCTCCCTTCCGTCTGGCGGCCCCGTGCCGCCGTCGTTGCCCTGACGCTGCTGCTGAGCGC GTGCGCCACGCTGCCCCAGCGTGGGCAGATCGTCATGCGTGACGTGGCCTTCCCGTTGCGGGACTTCCGCTTCCCCTCGG GGCTCCGCGTGGTGGTGGAGCAGGATGCCCGCTCTCCCGTGGTGGCGGTGGTCGCCGTGGTGGGAGCAGGGGGCTCCAGT GACCCAGGTGGCAAGGAGGGCCTGGCGCACGTCGTGGAGCACCTGGCGTTCCGTTCCCGCCACGCGGGTAGTCCGTCGGT GTGGCGGCGCCTGGAGGCGTCGGGCGCGGGCTTCTACAACGCCTCCACCAGTTTGGATTACACGTCCTACGAGACGCTGG GCCCCAAGGAGGCCTTGCCCGTTCTCCTGAAACTGGAAGGCCAGCGCCTGGCCGCGCCGCTCGCGGGCGTGAGCCCGGAG GTGTTCGCGGTAGAGCGCGAGGTGGTCCGCAACGAGCTCCGCCAGCGCAACGAGACGGGCTACGTGGGACAGGTCTTCAG TTGGTTGAACGCCGCGGCCTTCCCCGGTGGACACCCCTACGCGCGTCCTCTCGCCGGGACGCATGAGTCGCTGTCCGCGC TCAGCCTGTCGGACGCGCAGCGCTTCGCCCGGGCGCACTACCGTCCAGACAACGTCACGCTGGTCATCGCCGGTGACGTG GACCTGGCGGCCGTGGAGGCCACGCTTCGGGCAAACCTGCCCGAGGCCTGGGTGGGGACAGGCGCACCCCTGGCGCTGGA GGCACGTCTGCCCGCGCAGCCGGCGGCCCCGGCTACCACGCCCGCCCAGAAGTCGGTGCCTGTCTTCACTGCCGCCGTGC CCACGCCGGAGGTGTATCTGTCCTGGGTGCTGCCGCGCGGCTTCGACGAGTCCAGCGCGGTCCAGGACTTCGTGCGCGCC ACCTTCGGCCAGAACCTCTGGGGCGCGGTGCGCAACGACGGTGACATCGCGGACATCTCCACCAACCTGATTCCGGGGAC GCGCGCCTCGCTGCTGGTGGTGCGGGTGCGGCTCAGCCGGGGCGACGACCCGACGCGCTCGGCGGGGAAGGTGTTGGACC AGGTGCAGAACGCGTGGGTCCAGGAGATTCAGCCCGGCTCCGTGCTGGGCCGCGAGTTCGACTTCCAGGCGACGCGCCGG CAGGTGGTGACGGGCATGGTGCTGGAGTCAGAGGACCTCATGTCCCGCACCGAGCGCCGGGCGTTGCTCACCCACTTCAC GCAGGACGTGCGCTCCTACACCCGCTCGCAGGTGGCGCTGATGGGGCTCGGCGGTGGCAAGGTGACGGACTTCTCCTACC AGTGGCTACAGCGGGACCGGGTGCGAATGATTGTCGTCCGTCCCGGTGAGGTGCCGGGCGCGGCGACGGCGGCCGCCACG CTGTCCGCGGACGAGGAGCCCTGGACCACGCCCGCCGAGCAGGTGACGCCGTCCATGACGGCGGCGCTCGATTCGCCCGT GCAGGTGCTCAAGCTGGACAATGGCATGGAGGTGCTGCTCGCTCCGCGTCCGGGCCTCCCGGTGGTCCGCATCGGCGCGG CGCTGGGCGGTGGTTCGTCCTACGGCGCGAAGTCGGGGGTGGCGGACCTGGCCAACTGGGGCTCCTTCCGGGAGTCCTGG TTCGAGGGCCGCCCCAGTGACTGGGGCCTGCATTCGACCTCGTCGTTCCAGCGCGACCACCTGCGCGTCGGCATCTCCGG CACGGCCGGCAACGTTGGCAACATGCTGGCGATGCTGGCCGAGCAGCTCGACTCCACGCGGACCTCCGAGGACGTGGTGC GCTTCTACCGCGAGCAGGTGCTGCCCTGGCGCCAGGCGGTGGACTCGAATCCGGAGCTCCTGGCCGAGCGTCACCTCCAG AAGGCGCTGTATGGCACGCATCCCTTTGCGCGCGAGGCCACCGGCGCGGACCTGGCCCAGGTGTCCTGGACGGAAGCCGA GGCGTGGCTGAAGGACGTGTATCGCCCGGCCAATACGGTGGTCGTCATCGCCGGCGAGTTCGACGTGAAGGAAGTGGAGG GGCTGGCGCGCAAGTACCTCGGCGGTTGGAGCCGGGGGAAGGCGGCGCCCGTCGCCACGCCAGCCGCGCCGGAGCTGCCG GCGGCGTCTTCGGAGGCGACGGTCCTGCTCTCGCCGCGTCCTGGCGCGAGCCAGGCACAGGTGCAACTGGCCTGCCGGCT GCCCACGGCCACGCCCGAAGCAGAGGCGCGCTACGCGCTGATGGCTGAGTTGATTCACAATCACGCCTCGGGGGAGATGC GCTCGCGCCGGGGGGCGACGTACGGCTTCTCCGCGCGGCCCTGGCTGGGGCGCGGCGGCGCGGCCCACCTGGTGCTGGAG GGCGCGGTGGATGCGCAGCGCATGGGTGAAGGCATCAGCACCGTGACCCAGCTCCTCGCGTCCTTCGGGAAGGAAGTGCC CGAGCACGCGCTGGAGCGGGCTCGCAGGGGGATGCTGGCGTCCCAGGCCGTCTCCTTCATCAGCTCGGAAGCCTGGGTGA ACGCGCTGCTGACCGCGCGCGTCCGAGGCTTCGAGCCGGACACGGTGACGCGCCGGCCCGCGCTGCTCCAGACGGTGACG GCCGAGTCCCTTCGGAAGGAGTTCGAGGGCTGCTTCCAGCGGCCCGTTGTCTCCATCACCGCGGATGAGGGCAAGGCGCG GCCCGTCATCCAGGCCATGTCCCAGCCGTAG
Upstream 100 bases:
>100_bases CACGGCCTTCGCCTCGTCGCTGTCGAGATTCACTTCCGCTCGGGGGAGGCGGTGGGGCGTGCCCCAGCGCGCCGCTCCCG GGTTCGTCCTTGGAGCTTGG
Downstream 100 bases:
>100_bases CCCACCCCGGCCCCCTGCCTGCTGGCCGTCCCGCCTGGCAGGGGCTGGCGTCCACCTCCGTGTCCCTGGCTGCTTATCTT GAGGCCGCCAGGGACCAGCC
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 916; Mature: 916
Protein sequence:
>916_residues MFRPRVSLPSVWRPRAAVVALTLLLSACATLPQRGQIVMRDVAFPLRDFRFPSGLRVVVEQDARSPVVAVVAVVGAGGSS DPGGKEGLAHVVEHLAFRSRHAGSPSVWRRLEASGAGFYNASTSLDYTSYETLGPKEALPVLLKLEGQRLAAPLAGVSPE VFAVEREVVRNELRQRNETGYVGQVFSWLNAAAFPGGHPYARPLAGTHESLSALSLSDAQRFARAHYRPDNVTLVIAGDV DLAAVEATLRANLPEAWVGTGAPLALEARLPAQPAAPATTPAQKSVPVFTAAVPTPEVYLSWVLPRGFDESSAVQDFVRA TFGQNLWGAVRNDGDIADISTNLIPGTRASLLVVRVRLSRGDDPTRSAGKVLDQVQNAWVQEIQPGSVLGREFDFQATRR QVVTGMVLESEDLMSRTERRALLTHFTQDVRSYTRSQVALMGLGGGKVTDFSYQWLQRDRVRMIVVRPGEVPGAATAAAT LSADEEPWTTPAEQVTPSMTAALDSPVQVLKLDNGMEVLLAPRPGLPVVRIGAALGGGSSYGAKSGVADLANWGSFRESW FEGRPSDWGLHSTSSFQRDHLRVGISGTAGNVGNMLAMLAEQLDSTRTSEDVVRFYREQVLPWRQAVDSNPELLAERHLQ KALYGTHPFAREATGADLAQVSWTEAEAWLKDVYRPANTVVVIAGEFDVKEVEGLARKYLGGWSRGKAAPVATPAAPELP AASSEATVLLSPRPGASQAQVQLACRLPTATPEAEARYALMAELIHNHASGEMRSRRGATYGFSARPWLGRGGAAHLVLE GAVDAQRMGEGISTVTQLLASFGKEVPEHALERARRGMLASQAVSFISSEAWVNALLTARVRGFEPDTVTRRPALLQTVT AESLRKEFEGCFQRPVVSITADEGKARPVIQAMSQP
Sequences:
>Translated_916_residues MFRPRVSLPSVWRPRAAVVALTLLLSACATLPQRGQIVMRDVAFPLRDFRFPSGLRVVVEQDARSPVVAVVAVVGAGGSS DPGGKEGLAHVVEHLAFRSRHAGSPSVWRRLEASGAGFYNASTSLDYTSYETLGPKEALPVLLKLEGQRLAAPLAGVSPE VFAVEREVVRNELRQRNETGYVGQVFSWLNAAAFPGGHPYARPLAGTHESLSALSLSDAQRFARAHYRPDNVTLVIAGDV DLAAVEATLRANLPEAWVGTGAPLALEARLPAQPAAPATTPAQKSVPVFTAAVPTPEVYLSWVLPRGFDESSAVQDFVRA TFGQNLWGAVRNDGDIADISTNLIPGTRASLLVVRVRLSRGDDPTRSAGKVLDQVQNAWVQEIQPGSVLGREFDFQATRR QVVTGMVLESEDLMSRTERRALLTHFTQDVRSYTRSQVALMGLGGGKVTDFSYQWLQRDRVRMIVVRPGEVPGAATAAAT LSADEEPWTTPAEQVTPSMTAALDSPVQVLKLDNGMEVLLAPRPGLPVVRIGAALGGGSSYGAKSGVADLANWGSFRESW FEGRPSDWGLHSTSSFQRDHLRVGISGTAGNVGNMLAMLAEQLDSTRTSEDVVRFYREQVLPWRQAVDSNPELLAERHLQ KALYGTHPFAREATGADLAQVSWTEAEAWLKDVYRPANTVVVIAGEFDVKEVEGLARKYLGGWSRGKAAPVATPAAPELP AASSEATVLLSPRPGASQAQVQLACRLPTATPEAEARYALMAELIHNHASGEMRSRRGATYGFSARPWLGRGGAAHLVLE GAVDAQRMGEGISTVTQLLASFGKEVPEHALERARRGMLASQAVSFISSEAWVNALLTARVRGFEPDTVTRRPALLQTVT AESLRKEFEGCFQRPVVSITADEGKARPVIQAMSQP >Mature_916_residues MFRPRVSLPSVWRPRAAVVALTLLLSACATLPQRGQIVMRDVAFPLRDFRFPSGLRVVVEQDARSPVVAVVAVVGAGGSS DPGGKEGLAHVVEHLAFRSRHAGSPSVWRRLEASGAGFYNASTSLDYTSYETLGPKEALPVLLKLEGQRLAAPLAGVSPE VFAVEREVVRNELRQRNETGYVGQVFSWLNAAAFPGGHPYARPLAGTHESLSALSLSDAQRFARAHYRPDNVTLVIAGDV DLAAVEATLRANLPEAWVGTGAPLALEARLPAQPAAPATTPAQKSVPVFTAAVPTPEVYLSWVLPRGFDESSAVQDFVRA TFGQNLWGAVRNDGDIADISTNLIPGTRASLLVVRVRLSRGDDPTRSAGKVLDQVQNAWVQEIQPGSVLGREFDFQATRR QVVTGMVLESEDLMSRTERRALLTHFTQDVRSYTRSQVALMGLGGGKVTDFSYQWLQRDRVRMIVVRPGEVPGAATAAAT LSADEEPWTTPAEQVTPSMTAALDSPVQVLKLDNGMEVLLAPRPGLPVVRIGAALGGGSSYGAKSGVADLANWGSFRESW FEGRPSDWGLHSTSSFQRDHLRVGISGTAGNVGNMLAMLAEQLDSTRTSEDVVRFYREQVLPWRQAVDSNPELLAERHLQ KALYGTHPFAREATGADLAQVSWTEAEAWLKDVYRPANTVVVIAGEFDVKEVEGLARKYLGGWSRGKAAPVATPAAPELP AASSEATVLLSPRPGASQAQVQLACRLPTATPEAEARYALMAELIHNHASGEMRSRRGATYGFSARPWLGRGGAAHLVLE GAVDAQRMGEGISTVTQLLASFGKEVPEHALERARRGMLASQAVSFISSEAWVNALLTARVRGFEPDTVTRRPALLQTVT AESLRKEFEGCFQRPVVSITADEGKARPVIQAMSQP
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 98681; Mature: 98681
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRPRVSLPSVWRPRAAVVALTLLLSACATLPQRGQIVMRDVAFPLRDFRFPSGLRVVVE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEE QDARSPVVAVVAVVGAGGSSDPGGKEGLAHVVEHLAFRSRHAGSPSVWRRLEASGAGFYN CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC ASTSLDYTSYETLGPKEALPVLLKLEGQRLAAPLAGVSPEVFAVEREVVRNELRQRNETG CCCCCCCCCCCCCCCHHHCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC YVGQVFSWLNAAAFPGGHPYARPLAGTHESLSALSLSDAQRFARAHYRPDNVTLVIAGDV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC DLAAVEATLRANLPEAWVGTGAPLALEARLPAQPAAPATTPAQKSVPVFTAAVPTPEVYL CHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH SWVLPRGFDESSAVQDFVRATFGQNLWGAVRNDGDIADISTNLIPGTRASLLVVRVRLSR EEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEECC GDDPTRSAGKVLDQVQNAWVQEIQPGSVLGREFDFQATRRQVVTGMVLESEDLMSRTERR CCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ALLTHFTQDVRSYTRSQVALMGLGGGKVTDFSYQWLQRDRVRMIVVRPGEVPGAATAAAT HHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHC LSADEEPWTTPAEQVTPSMTAALDSPVQVLKLDNGMEVLLAPRPGLPVVRIGAALGGGSS CCCCCCCCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEECCCCCCEEEEECEECCCCC YGAKSGVADLANWGSFRESWFEGRPSDWGLHSTSSFQRDHLRVGISGTAGNVGNMLAMLA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH EQLDSTRTSEDVVRFYREQVLPWRQAVDSNPELLAERHLQKALYGTHPFAREATGADLAQ HHHHCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHH VSWTEAEAWLKDVYRPANTVVVIAGEFDVKEVEGLARKYLGGWSRGKAAPVATPAAPELP CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AASSEATVLLSPRPGASQAQVQLACRLPTATPEAEARYALMAELIHNHASGEMRSRRGAT CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCC YGFSARPWLGRGGAAHLVLEGAVDAQRMGEGISTVTQLLASFGKEVPEHALERARRGMLA CCCCCCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAVSFISSEAWVNALLTARVRGFEPDTVTRRPALLQTVTAESLRKEFEGCFQRPVVSIT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE ADEGKARPVIQAMSQP CCCCCCCHHHHHHCCC >Mature Secondary Structure MFRPRVSLPSVWRPRAAVVALTLLLSACATLPQRGQIVMRDVAFPLRDFRFPSGLRVVVE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEE QDARSPVVAVVAVVGAGGSSDPGGKEGLAHVVEHLAFRSRHAGSPSVWRRLEASGAGFYN CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC ASTSLDYTSYETLGPKEALPVLLKLEGQRLAAPLAGVSPEVFAVEREVVRNELRQRNETG CCCCCCCCCCCCCCCHHHCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC YVGQVFSWLNAAAFPGGHPYARPLAGTHESLSALSLSDAQRFARAHYRPDNVTLVIAGDV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC DLAAVEATLRANLPEAWVGTGAPLALEARLPAQPAAPATTPAQKSVPVFTAAVPTPEVYL CHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH SWVLPRGFDESSAVQDFVRATFGQNLWGAVRNDGDIADISTNLIPGTRASLLVVRVRLSR EEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEECC GDDPTRSAGKVLDQVQNAWVQEIQPGSVLGREFDFQATRRQVVTGMVLESEDLMSRTERR CCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH ALLTHFTQDVRSYTRSQVALMGLGGGKVTDFSYQWLQRDRVRMIVVRPGEVPGAATAAAT HHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCHHHHHC LSADEEPWTTPAEQVTPSMTAALDSPVQVLKLDNGMEVLLAPRPGLPVVRIGAALGGGSS CCCCCCCCCCCHHHHCCHHHHHHCCCEEEEEECCCCEEEEECCCCCCEEEEECEECCCCC YGAKSGVADLANWGSFRESWFEGRPSDWGLHSTSSFQRDHLRVGISGTAGNVGNMLAMLA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH EQLDSTRTSEDVVRFYREQVLPWRQAVDSNPELLAERHLQKALYGTHPFAREATGADLAQ HHHHCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHH VSWTEAEAWLKDVYRPANTVVVIAGEFDVKEVEGLARKYLGGWSRGKAAPVATPAAPELP CCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AASSEATVLLSPRPGASQAQVQLACRLPTATPEAEARYALMAELIHNHASGEMRSRRGAT CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCC YGFSARPWLGRGGAAHLVLEGAVDAQRMGEGISTVTQLLASFGKEVPEHALERARRGMLA CCCCCCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAVSFISSEAWVNALLTARVRGFEPDTVTRRPALLQTVTAESLRKEFEGCFQRPVVSIT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE ADEGKARPVIQAMSQP CCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]