| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756951
Identifier: 108756951
GI number: 108756951
Start: 4218073
End: 4219278
Strand: Direct
Name: 108756951
Synonym: MXAN_3615
Alternate gene names: NA
Gene position: 4218073-4219278 (Clockwise)
Preceding gene: 108758112
Following gene: 108759588
Centisome position: 46.15
GC content: 65.84
Gene sequence:
>1206_bases ATGAACGCCGCCGCGGTGCAGCGGCTTGAGAGGTATTTCCAGCAAATCGGCGAGGTACTCGGCGAGGAGAGCCGACGCGG CTCGTTCGCCCTCTACGCCATGGGTCTGCTGGGAGAGGGGGAGCGAAAGAGCGTGGAGCCCATCGCCGCTCGCGCGTGTC CGGACCCCGAGCGAGTGGATGCCATGCACCAGCGGTTGTTGCACTTCGCCGTGGACTCGAGGTGGAGCGACCGGGACGTG CGGCGCCAGGCGGCGAGGTATGCGCTGGAGGCGATGACGCGGCGGGAGCCGGTGGAAGCATGGATTGTGGACGACACGGG CTTCCTCAAGCAGGGCAAGCACTCGGTGGGCGTGCAGCGGCAGTACACCGGCTCGGCGGGAAAAGTGGCCAACTGCCAGA TTGGCGTCAGCCTCAGTGTCGCCACCCGCACCGAGCACCTGCCCCTCGACTTCGAGTTGTACCTGCCCGAGTGCTGGACC AACGACGCGGCTCGCCGCCGCGAGGCTCGCATCCCCGACGATGTCCCCTTCAAGACGAAGCCTCAACTGGCGCTGCAAAT GATTGAGCGGGCCGTGCAGGACGGTGCCCCTCCGGGCGTCATCCTGGGGGACACTGCCTATGGCACTTCCAGTCAGTTTC GTGCGCACCTGCGCGCGTTGGGGTTGCACTACGCAGTCGCAGTGGACCCTCAAACGACTGTCAGCGTGCTGGATGCCCAG GGACGGCCCCGCGGCAATGTGCGCAGCGTTTCAGCCCTGGCCTTGCACATTCACGAGCGAGGGGGATTTCGTCGGTGCAC CTGGCGGCAGGGCCCCCAGAGGGACTTGTCGGCGCGCTTCGCCCTGCGCCGAGTCGTCGCCGCGGGTGTACCCCAGCGCG AGCAAGAGCCGCTGTGGCTACTCATTGAGTGGAGGGACGGTGAGGCCGAGCCCGCCAATTCCTTCCTGGTTTCCCTTCCA GGTTTCAGGACGAAGAAGCAACTCATCCGCTTGGTGATGCAACGCTGGAGAACCGAGCGCGTCTACGAGGAACTCAAGGG CGAACTGGGTTTGGACCATTATGAAGGCCGCCGCTTCCCTGGCTGGCACCACCATGTTTCGGTAGCACTGTGCTGCTACG CGTTCATCGTGGCTGAACGCGTGCGGCGTTTTCCCCCCTCGGCCCGAGGGGCGGCTGAAGCCTACGCGCAGCCACTCTCG GCCTGA
Upstream 100 bases:
>100_bases GTAGGCAGAAGGGAGAGTGGGCGACGGAGGGCTGGGCGGGCAGGCCCTCATTGCATTGGCCGCCATCCGCCCCACTCATG AAGCAGGTATGGACTCCTTC
Downstream 100 bases:
>100_bases GCGCCATTTCCGCGACAGCTTCATCACCGCTCGGCTCGCCATGGCCCGGGGGATTGCCACCTGGCTGCCGCGCTGCCCCA CCTGCCACCGCTCCAACCAC
Product: IS4 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNAAAVQRLERYFQQIGEVLGEESRRGSFALYAMGLLGEGERKSVEPIAARACPDPERVDAMHQRLLHFAVDSRWSDRDV RRQAARYALEAMTRREPVEAWIVDDTGFLKQGKHSVGVQRQYTGSAGKVANCQIGVSLSVATRTEHLPLDFELYLPECWT NDAARRREARIPDDVPFKTKPQLALQMIERAVQDGAPPGVILGDTAYGTSSQFRAHLRALGLHYAVAVDPQTTVSVLDAQ GRPRGNVRSVSALALHIHERGGFRRCTWRQGPQRDLSARFALRRVVAAGVPQREQEPLWLLIEWRDGEAEPANSFLVSLP GFRTKKQLIRLVMQRWRTERVYEELKGELGLDHYEGRRFPGWHHHVSVALCCYAFIVAERVRRFPPSARGAAEAYAQPLS A
Sequences:
>Translated_401_residues MNAAAVQRLERYFQQIGEVLGEESRRGSFALYAMGLLGEGERKSVEPIAARACPDPERVDAMHQRLLHFAVDSRWSDRDV RRQAARYALEAMTRREPVEAWIVDDTGFLKQGKHSVGVQRQYTGSAGKVANCQIGVSLSVATRTEHLPLDFELYLPECWT NDAARRREARIPDDVPFKTKPQLALQMIERAVQDGAPPGVILGDTAYGTSSQFRAHLRALGLHYAVAVDPQTTVSVLDAQ GRPRGNVRSVSALALHIHERGGFRRCTWRQGPQRDLSARFALRRVVAAGVPQREQEPLWLLIEWRDGEAEPANSFLVSLP GFRTKKQLIRLVMQRWRTERVYEELKGELGLDHYEGRRFPGWHHHVSVALCCYAFIVAERVRRFPPSARGAAEAYAQPLS A >Mature_401_residues MNAAAVQRLERYFQQIGEVLGEESRRGSFALYAMGLLGEGERKSVEPIAARACPDPERVDAMHQRLLHFAVDSRWSDRDV RRQAARYALEAMTRREPVEAWIVDDTGFLKQGKHSVGVQRQYTGSAGKVANCQIGVSLSVATRTEHLPLDFELYLPECWT NDAARRREARIPDDVPFKTKPQLALQMIERAVQDGAPPGVILGDTAYGTSSQFRAHLRALGLHYAVAVDPQTTVSVLDAQ GRPRGNVRSVSALALHIHERGGFRRCTWRQGPQRDLSARFALRRVVAAGVPQREQEPLWLLIEWRDGEAEPANSFLVSLP GFRTKKQLIRLVMQRWRTERVYEELKGELGLDHYEGRRFPGWHHHVSVALCCYAFIVAERVRRFPPSARGAAEAYAQPLS A
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45221; Mature: 45221
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAAVQRLERYFQQIGEVLGEESRRGSFALYAMGLLGEGERKSVEPIAARACPDPERVD CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHHHH AMHQRLLHFAVDSRWSDRDVRRQAARYALEAMTRREPVEAWIVDDTGFLKQGKHSVGVQR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHCCCEE QYTGSAGKVANCQIGVSLSVATRTEHLPLDFELYLPECWTNDAARRREARIPDDVPFKTK EECCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCC PQLALQMIERAVQDGAPPGVILGDTAYGTSSQFRAHLRALGLHYAVAVDPQTTVSVLDAQ HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHEECC GRPRGNVRSVSALALHIHERGGFRRCTWRQGPQRDLSARFALRRVVAAGVPQREQEPLWL CCCCCCCHHHHHHEEEEHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE LIEWRDGEAEPANSFLVSLPGFRTKKQLIRLVMQRWRTERVYEELKGELGLDHYEGRRFP EEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GWHHHVSVALCCYAFIVAERVRRFPPSARGAAEAYAQPLSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MNAAAVQRLERYFQQIGEVLGEESRRGSFALYAMGLLGEGERKSVEPIAARACPDPERVD CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHHHH AMHQRLLHFAVDSRWSDRDVRRQAARYALEAMTRREPVEAWIVDDTGFLKQGKHSVGVQR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCHHCCCEE QYTGSAGKVANCQIGVSLSVATRTEHLPLDFELYLPECWTNDAARRREARIPDDVPFKTK EECCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCC PQLALQMIERAVQDGAPPGVILGDTAYGTSSQFRAHLRALGLHYAVAVDPQTTVSVLDAQ HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEECCCHHHHHEECC GRPRGNVRSVSALALHIHERGGFRRCTWRQGPQRDLSARFALRRVVAAGVPQREQEPLWL CCCCCCCHHHHHHEEEEHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE LIEWRDGEAEPANSFLVSLPGFRTKKQLIRLVMQRWRTERVYEELKGELGLDHYEGRRFP EEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GWHHHVSVALCCYAFIVAERVRRFPPSARGAAEAYAQPLSA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]