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The map label for this gene is hinfIM [H]

Identifier: 108563725

GI number: 108563725

Start: 1344372

End: 1345451

Strand: Reverse

Name: hinfIM [H]

Synonym: HPAG1_1300

Alternate gene names: 108563725

Gene position: 1345451-1344372 (Counterclockwise)

Preceding gene: 108563726

Following gene: 108563724

Centisome position: 84.28

GC content: 33.89

Gene sequence:

>1080_bases
ATGGATTTTTTAAAAGAAAACTTAAACACTATCATAGAGGGGGATTGTTTAGAAAAATTGAAAGACTTTCCTAATAAAAG
CGTTGATTTCATCTTTGCTGACCCCCCTTATTTTATGCAAACAGAGGGGGAATTGAAGCGTTTTGAAGGCACAAAATTTC
AAGGCGTTGAGGATCATTGGGATAAATTTGGCTCTTTTGAAGAATACGATGCCTTTTGTTTGGGTTGGTTGAAAGAATGC
CAAAGGATTTTAAAAGATAATGGCAGTATTTGCGTGATAGGGAGTTTTCAAAATATTTTTAGAATTGGTTTTCATTTGCA
AAATTTAGGGTTTTGGATACTCAATGATATTATTTGGCACAAGAGCAATCCGGTGCCTAATTTTGCTGGCAAGAGATTAT
GCAACGCCCATGAGACGCTTATTTGGTGCGCTAAACACAAAAACAGCAAAGTTAGCTTTAATTATAAAACAATGAAGTAC
CTCAATAACGACAAACAAGAAAAATCGGTTTGGCAAATCCCTATTTGCATGGGTAACGAAAGACTAAAAGACGCGCAAGG
TAAAAAAGTGCATTCCACGCAAAAACCAGAAGCGCTTTTAAAAAAAATCATTTTAAGCGCGACTAAACCTAAAGACATTA
TTTTAGATCCCTTTTTTGGCACAGGCACAACAGGGGCTGTGGCTAAATCCATGAACAGGTATTTTATTGGCATTGAAAAA
GATTCTTTTTATATCAAAGAAGCGGCAAAACGCCTTAATAGCGCTAGGGATAAAAGCGATTTTATCACTAATTTAGAATT
AGAAACTAAACCCCCAAAAATCCCTATGAGTCTTTTAATTTCTAAACAATTATTAAAAATCGGGGATTTTTTATACTCAC
CTAACAAAGAAAAAATTTGTCAAGTTTTAGAAAACGGACAGGTAAGGGATAATGAAAATTATGAAACTTCTATCCATAAG
ATGAGCGCTAAATATTTGAATAGAACCAACCATAATGGCTGGAAATTTTTTTATGCGTATTATCAAAATCAATTTTTGTT
GCTAGATGAATTGCGTTATATCTGCCAAAAGGATTTTTAA

Upstream 100 bases:

>100_bases
ATCATTTGATGAGAACAAATCTAGAGATTAAACATTAAGATAGCCTTAAAATGCTTGTGTTAAAATGGCTAGAGTTGCAG
ATATAAAAGGCTAGTTAATC

Downstream 100 bases:

>100_bases
TGGATTATCAAACCTTTAACGAGATTTTTAATCGTTTTGTCTTTGGAACATCTAAAGCAAAATTACTTGAAAATATTGCT
GAAAATCCTGAACGCTATTT

Product: adenine specific DNA methyltransferase

Products: NA

Alternate protein names: M.HinfI; Adenine-specific methyltransferase HinfI [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDFLKENLNTIIEGDCLEKLKDFPNKSVDFIFADPPYFMQTEGELKRFEGTKFQGVEDHWDKFGSFEEYDAFCLGWLKEC
QRILKDNGSICVIGSFQNIFRIGFHLQNLGFWILNDIIWHKSNPVPNFAGKRLCNAHETLIWCAKHKNSKVSFNYKTMKY
LNNDKQEKSVWQIPICMGNERLKDAQGKKVHSTQKPEALLKKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEK
DSFYIKEAAKRLNSARDKSDFITNLELETKPPKIPMSLLISKQLLKIGDFLYSPNKEKICQVLENGQVRDNENYETSIHK
MSAKYLNRTNHNGWKFFYAYYQNQFLLLDELRYICQKDF

Sequences:

>Translated_359_residues
MDFLKENLNTIIEGDCLEKLKDFPNKSVDFIFADPPYFMQTEGELKRFEGTKFQGVEDHWDKFGSFEEYDAFCLGWLKEC
QRILKDNGSICVIGSFQNIFRIGFHLQNLGFWILNDIIWHKSNPVPNFAGKRLCNAHETLIWCAKHKNSKVSFNYKTMKY
LNNDKQEKSVWQIPICMGNERLKDAQGKKVHSTQKPEALLKKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEK
DSFYIKEAAKRLNSARDKSDFITNLELETKPPKIPMSLLISKQLLKIGDFLYSPNKEKICQVLENGQVRDNENYETSIHK
MSAKYLNRTNHNGWKFFYAYYQNQFLLLDELRYICQKDF
>Mature_359_residues
MDFLKENLNTIIEGDCLEKLKDFPNKSVDFIFADPPYFMQTEGELKRFEGTKFQGVEDHWDKFGSFEEYDAFCLGWLKEC
QRILKDNGSICVIGSFQNIFRIGFHLQNLGFWILNDIIWHKSNPVPNFAGKRLCNAHETLIWCAKHKNSKVSFNYKTMKY
LNNDKQEKSVWQIPICMGNERLKDAQGKKVHSTQKPEALLKKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEK
DSFYIKEAAKRLNSARDKSDFITNLELETKPPKIPMSLLISKQLLKIGDFLYSPNKEKICQVLENGQVRDNENYETSIHK
MSAKYLNRTNHNGWKFFYAYYQNQFLLLDELRYICQKDF

Specific function: This methylase recognizes the double-stranded sequence GANTC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the HinfI endonuclease [H]

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082238, Length=270, Percent_Identity=35.9259259259259, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002941
- InterPro:   IPR002052
- InterPro:   IPR001091 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 41896; Mature: 41896

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLKENLNTIIEGDCLEKLKDFPNKSVDFIFADPPYFMQTEGELKRFEGTKFQGVEDHW
CCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCEECCCCHHHHCCCCCCCCCHHHH
DKFGSFEEYDAFCLGWLKECQRILKDNGSICVIGSFQNIFRIGFHLQNLGFWILNDIIWH
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHC
KSNPVPNFAGKRLCNAHETLIWCAKHKNSKVSFNYKTMKYLNNDKQEKSVWQIPICMGNE
CCCCCCCHHHHHHCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCCCCCEEEEEEEECCC
RLKDAQGKKVHSTQKPEALLKKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEK
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCEEEEEEC
DSFYIKEAAKRLNSARDKSDFITNLELETKPPKIPMSLLISKQLLKIGDFLYSPNKEKIC
CCHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QVLENGQVRDNENYETSIHKMSAKYLNRTNHNGWKFFYAYYQNQFLLLDELRYICQKDF
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEHHHHHHHHCCCC
>Mature Secondary Structure
MDFLKENLNTIIEGDCLEKLKDFPNKSVDFIFADPPYFMQTEGELKRFEGTKFQGVEDHW
CCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCEECCCCHHHHCCCCCCCCCHHHH
DKFGSFEEYDAFCLGWLKECQRILKDNGSICVIGSFQNIFRIGFHLQNLGFWILNDIIWH
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHC
KSNPVPNFAGKRLCNAHETLIWCAKHKNSKVSFNYKTMKYLNNDKQEKSVWQIPICMGNE
CCCCCCCHHHHHHCCCHHHEEEEECCCCCEEEEEHHHHHHHCCCCCCCCEEEEEEEECCC
RLKDAQGKKVHSTQKPEALLKKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEK
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCEEEEEEC
DSFYIKEAAKRLNSARDKSDFITNLELETKPPKIPMSLLISKQLLKIGDFLYSPNKEKIC
CCHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
QVLENGQVRDNENYETSIHKMSAKYLNRTNHNGWKFFYAYYQNQFLLLDELRYICQKDF
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3063606 [H]