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The map label for this gene is 108563723

Identifier: 108563723

GI number: 108563723

Start: 1343505

End: 1343732

Strand: Reverse

Name: 108563723

Synonym: HPAG1_1298

Alternate gene names: NA

Gene position: 1343732-1343505 (Counterclockwise)

Preceding gene: 108563724

Following gene: 108563722

Centisome position: 84.17

GC content: 29.39

Gene sequence:

>228_bases
TTGAACTTTGATGAAAATCCTTTAGAGAGCTTTAAAGAAATCAAAGATTTAGCACCAAGCGTTTATAGAAAGCTTTTGGA
CAATGATGGAATTTTCAATCTTGTGTTAATCTTATTCCCAGAACAAAAAGTTTTAAAAATGTTAGCAGAGTGTTTTAAAC
AACAGAATAAAACGATTTATCAGCAATTAGCGTTAAAGTTAGAAGAAAAGTTATTGTCTTTGCGATAG

Upstream 100 bases:

>100_bases
TGTTATGGTAAGGAGTTGTTTGAAAATCTTAATATCTTGCAAGTTTGGGATGAGATTTTAAACCATTTAGCGGCGTGAAA
CCTTACCTGATTTACCCAGT

Downstream 100 bases:

>100_bases
AGGCTCTAAAGTAAGCCCCATTTCTAATGTTTTTGTAACGGGCATGCTTCGTGATTTGCATGTGAACGGATCGGAGAGTT
ATGCGTTTTTGTTGTATCGT

Product: type II restriction endonuclease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MNFDENPLESFKEIKDLAPSVYRKLLDNDGIFNLVLILFPEQKVLKMLAECFKQQNKTIYQQLALKLEEKLLSLR

Sequences:

>Translated_75_residues
MNFDENPLESFKEIKDLAPSVYRKLLDNDGIFNLVLILFPEQKVLKMLAECFKQQNKTIYQQLALKLEEKLLSLR
>Mature_75_residues
MNFDENPLESFKEIKDLAPSVYRKLLDNDGIFNLVLILFPEQKVLKMLAECFKQQNKTIYQQLALKLEEKLLSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8859; Mature: 8859

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDENPLESFKEIKDLAPSVYRKLLDNDGIFNLVLILFPEQKVLKMLAECFKQQNKTIY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QQLALKLEEKLLSLR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFDENPLESFKEIKDLAPSVYRKLLDNDGIFNLVLILFPEQKVLKMLAECFKQQNKTIY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QQLALKLEEKLLSLR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA