| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is nadD [H]
Identifier: 108563709
GI number: 108563709
Start: 1329987
End: 1330511
Strand: Reverse
Name: nadD [H]
Synonym: HPAG1_1284
Alternate gene names: 108563709
Gene position: 1330511-1329987 (Counterclockwise)
Preceding gene: 108563710
Following gene: 108563707
Centisome position: 83.35
GC content: 38.86
Gene sequence:
>525_bases TTGAATACGATGAATAGCGTCTTACAATGCAAAGAATTAGCGCTCTATGGAGGGAGTTTTGATCCCTTACATAAGGCTCA TTTAGCCATTATTGATCAAACTTTAGAATTATTGCCATTCGTTAAGCTCATTGTCTTACCCGCTTATCAAAACCCTTTCA AAAAGCCATGTTTTTTGGATGTGCAAACCCGTTTTAAGGAATTAGAAAGAGCTTTAAGGGGAATAGACAGGGTGCTGTTG AGCGATTTTGAAATCAAGCAAGAAAGGGCTGTGCCTACGATAGAAAGCGTGATCTATTTTCAAAAACTCTATTGCCCTAA AACGCTTTATTTAGTCATAGGAGCGGATTGCTTAAGGCATCTTTCTTCTTGGACTAACGCTAAAGAGCTTTTAAAAAGGG TGGAATTAGTGGTTTTTGAAAGGATTGGCTATGAAGAGATCCAATTTAAGGGGCGTTATTTCCCTTTAAAGGGCATTGAT GCACCGATTTCTTCTAGCGCGATTAGGGCTAGTTTAGGGGTTTAA
Upstream 100 bases:
>100_bases ATTATTTTACAAGGCAATTCGTTTGAAATCCAACGCTTGCAATTAGAAATCGGGGGGCTTAGGGGGGTTAAATTCGCTAA ATTGACTAAGGCGTTTAGCT
Downstream 100 bases:
>100_bases GCGTGTTTTTTAATGTGGCTATAGGCTTCTTGAATGATAGCGAAGCGTTTGGCGTAAAGAGCCTTTTTTTCTTTAAGATC GCATAAATCAGGGTGGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNTMNSVLQCKELALYGGSFDPLHKAHLAIIDQTLELLPFVKLIVLPAYQNPFKKPCFLDVQTRFKELERALRGIDRVLL SDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRHLSSWTNAKELLKRVELVVFERIGYEEIQFKGRYFPLKGID APISSSAIRASLGV
Sequences:
>Translated_174_residues MNTMNSVLQCKELALYGGSFDPLHKAHLAIIDQTLELLPFVKLIVLPAYQNPFKKPCFLDVQTRFKELERALRGIDRVLL SDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRHLSSWTNAKELLKRVELVVFERIGYEEIQFKGRYFPLKGID APISSSAIRASLGV >Mature_174_residues MNTMNSVLQCKELALYGGSFDPLHKAHLAIIDQTLELLPFVKLIVLPAYQNPFKKPCFLDVQTRFKELERALRGIDRVLL SDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRHLSSWTNAKELLKRVELVVFERIGYEEIQFKGRYFPLKGID APISSSAIRASLGV
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 19921; Mature: 19921
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMNSVLQCKELALYGGSFDPLHKAHLAIIDQTLELLPFVKLIVLPAYQNPFKKPCFLD CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEH VQTRFKELERALRGIDRVLLSDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LSSWTNAKELLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASLGV HHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MNTMNSVLQCKELALYGGSFDPLHKAHLAIIDQTLELLPFVKLIVLPAYQNPFKKPCFLD CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEH VQTRFKELERALRGIDRVLLSDFEIKQERAVPTIESVIYFQKLYCPKTLYLVIGADCLRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LSSWTNAKELLKRVELVVFERIGYEEIQFKGRYFPLKGIDAPISSSAIRASLGV HHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA