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The map label for this gene is infA [H]

Identifier: 108563668

GI number: 108563668

Start: 1302494

End: 1302712

Strand: Reverse

Name: infA [H]

Synonym: HPAG1_1243

Alternate gene names: 108563668

Gene position: 1302712-1302494 (Counterclockwise)

Preceding gene: 108563669

Following gene: 108563667

Centisome position: 81.6

GC content: 41.55

Gene sequence:

>219_bases
ATGGCAAGAGATGATGTTATAGAAGTGGATGGGAAAGTGATTGAGGCGTTGCCTAACGCCACTTTTAAGGTGGAGTTAGA
CAATAAGCATGTGGTGTTGTGCCGTATTTCTGGAAAGATGCGCATGCACTATATTAGGATTGCTTTAGGCGATAGGGTCA
AGCTAGAGCTTACGCCCTATAGTTTAGACAAAGGTCGGATAACTTTTAGATATAAATGA

Upstream 100 bases:

>100_bases
ATAAGTGGAGCGTGGTTTCAGTGGATGGGCTTAACACAAGCCACCATGAGCATACTATCGCCATAGTTGGCAATAAAGCA
GTGATTCTTACGGAGCGTTA

Downstream 100 bases:

>100_bases
ATTTAAGGGTTATTTCAATGAAAATATGTTAATATAAAAGTTTTTAGTAGTGCCTAATTTTTTCAAAGGAGAAAAATCAT
GAAAGTCAGGCCATCAGTGA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MARDDVIEVDGKVIEALPNATFKVELDNKHVVLCRISGKMRMHYIRIALGDRVKLELTPYSLDKGRITFRYK

Sequences:

>Translated_72_residues
MARDDVIEVDGKVIEALPNATFKVELDNKHVVLCRISGKMRMHYIRIALGDRVKLELTPYSLDKGRITFRYK
>Mature_71_residues
ARDDVIEVDGKVIEALPNATFKVELDNKHVVLCRISGKMRMHYIRIALGDRVKLELTPYSLDKGRITFRYK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=61.1111111111111, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 8348; Mature: 8217

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDDVIEVDGKVIEALPNATFKVELDNKHVVLCRISGKMRMHYIRIALGDRVKLELTPY
CCCCCEEEECCEEEECCCCCEEEEEECCCEEEEEEECCCEEEEEEEEEECCEEEEEECCC
SLDKGRITFRYK
CCCCCEEEEEEC
>Mature Secondary Structure 
ARDDVIEVDGKVIEALPNATFKVELDNKHVVLCRISGKMRMHYIRIALGDRVKLELTPY
CCCCEEEECCEEEECCCCCEEEEEECCCEEEEEEECCCEEEEEEEEEECCEEEEEECCC
SLDKGRITFRYK
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA