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The map label for this gene is 108563598

Identifier: 108563598

GI number: 108563598

Start: 1237505

End: 1238161

Strand: Direct

Name: 108563598

Synonym: HPAG1_1173

Alternate gene names: NA

Gene position: 1237505-1238161 (Clockwise)

Preceding gene: 108563597

Following gene: 108563599

Centisome position: 77.52

GC content: 36.83

Gene sequence:

>657_bases
GTGAAAAACTTCAACCGCCTTATTTATACGGACAATCTTGAAGAAAGCTTAGAAGAGGCTGCAAGCCTTTTTGAACGCCA
CATTAAATTCTACACCGAGATCATTGAAAAAGACAAAAAGGTGATCAAAACTTTCAACAAGGATTTTAAAATAGAGCATG
CCAAAGAAGTTATTTCAAAGGCTCACTTAAAACACAGCGAATTAAACGCCTTTTTAATCGCCGCACCCAGCTATGGCACA
GAAGCCCAAAACGCGCTTTTAAAAATCTTAGAAGAACCCCCGAATAATGTTTGTTTTATCATGTTTGCTAAAAGCCCAAA
CCATGTTTTAGCCACCATTAAATCCCGCCTAATCAAAGAAGACAAGCGCCAAAAAATCCCTCTAAAACCTTTAGATTTGG
ATTTATCCAGGCTGGATTTGAAAGATATTTACGCGTTTTTAAAAAATTTAGACAAAGAAAATTTTGATTCCAGAGAAAAT
CAGAGGGAAAAAATTGAAAGCCTATTGGAGAGCGTTAACAGGCATAAGATCCCCTTAAACGAGCAAGAATTGCAAGCCTT
TGATTTAGCGATCAAGGCTAACAGCTCTTATTACAAGCTCAGCTACAATCTTTTACCCCTACTTTTAAGCCTTTTATCTA
AAAAGAAAACGCCATGA

Upstream 100 bases:

>100_bases
TTTTAAAAGAGCATGACAGCTTGCTGGATTATAAATTGTTGCAGCTCTTCAAACTCTTTGAAAACGCGCTTTTTAGCGTG
CTATACAATAAGGTTACTCT

Downstream 100 bases:

>100_bases
TTGTAAAACGCCTTAACCCTGATGCGCTCAAAAACGCTCTACAAAAAATAGGCCCAGAAGAGATTGCGCAAAACCATATG
CACCAAAAAGGCGTTAGCTT

Product: DNA polymerase III subunit delta'

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Prime Subunit HolB; DNA Polymerase III Delta Prime Subunit; DNA Polymerase III Delta Prime Subunit Holb

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKNFNRLIYTDNLEESLEEAASLFERHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISKAHLKHSELNAFLIAAPSYGT
EAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKEDKRQKIPLKPLDLDLSRLDLKDIYAFLKNLDKENFDSREN
QREKIESLLESVNRHKIPLNEQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP

Sequences:

>Translated_218_residues
MKNFNRLIYTDNLEESLEEAASLFERHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISKAHLKHSELNAFLIAAPSYGT
EAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKEDKRQKIPLKPLDLDLSRLDLKDIYAFLKNLDKENFDSREN
QREKIESLLESVNRHKIPLNEQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
>Mature_218_residues
MKNFNRLIYTDNLEESLEEAASLFERHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISKAHLKHSELNAFLIAAPSYGT
EAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKEDKRQKIPLKPLDLDLSRLDLKDIYAFLKNLDKENFDSREN
QREKIESLLESVNRHKIPLNEQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP

Specific function: Unknown

COG id: COG0470

COG function: function code L; ATPase involved in DNA replication

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 25401; Mature: 25401

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFNRLIYTDNLEESLEEAASLFERHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISK
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AHLKHSELNAFLIAAPSYGTEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
HHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
DKRQKIPLKPLDLDLSRLDLKDIYAFLKNLDKENFDSRENQREKIESLLESVNRHKIPLN
HHHCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
HHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNFNRLIYTDNLEESLEEAASLFERHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVISK
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AHLKHSELNAFLIAAPSYGTEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
HHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
DKRQKIPLKPLDLDLSRLDLKDIYAFLKNLDKENFDSRENQREKIESLLESVNRHKIPLN
HHHCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
HHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA