Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108563508
Identifier: 108563508
GI number: 108563508
Start: 1137948
End: 1138142
Strand: Reverse
Name: 108563508
Synonym: HPAG1_1083
Alternate gene names: NA
Gene position: 1138142-1137948 (Counterclockwise)
Preceding gene: 108563509
Following gene: 108563506
Centisome position: 71.3
GC content: 29.23
Gene sequence:
>195_bases TTGTTTAGATTTATTGCTTCTTGTTGTTTAATGTTTAATGATTTTAATCGCTTGATTTTGTTTTTTACTGCTTATGGCTT TTGTTGTTTTGCTTTGTTTTTCTTGTGTTTGAGTTTTGTTTTTGGTGTTTTTGGTAGGTCTGAGCTGATTATGAATGCGT TTGGATTTGAAAACTCTGTTCTTATCAAGTATTGA
Upstream 100 bases:
>100_bases TTGTTTGTTTTTTTACTGCTTATGGTTTTTGCTTGTTTTTTAATGTTTAATGTGTTTAGTTTGTTTGTATTGGATTTAGC GTTGAGCTTTCTTAATTCTT
Downstream 100 bases:
>100_bases TGTTTAAAACCTTATTTTTATAGCTTTAAGTTTTATAATTATAGTGAAATTCATGAGAAAATGGGGGGTTATTTTTGATT TTTTAACGCCCTGTATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY
Sequences:
>Translated_64_residues MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY >Mature_64_residues MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7505; Mature: 7505
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCE LIKY EEEC >Mature Secondary Structure MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCE LIKY EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA