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The map label for this gene is exbB [C]

Identifier: 108563493

GI number: 108563493

Start: 1123719

End: 1124288

Strand: Reverse

Name: exbB [C]

Synonym: HPAG1_1068

Alternate gene names: 108563493

Gene position: 1124288-1123719 (Counterclockwise)

Preceding gene: 108563494

Following gene: 108563492

Centisome position: 70.43

GC content: 37.72

Gene sequence:

>570_bases
ATGTTCGATTCAATCGTTTATTTTTTCAATAAGAGCGGGTTTGTTACCACGCTTGTTTTAGTTTGGATTTCGCTTTATTT
GGTGATGACTTTATGGGTCTTTTTGTATAAAAGCATTGTGTTAAAGATTGAACTCAAGCGCGAGATGCAATCTTTGTCTA
ACATTCTTAATGGAGCGCAAGACGCTCCAGAGCATTTTATGTTTAATAAAAAAAGAAATGATGAGACCAAAAGGTATTCT
AATGAATTGTTGCAGGCTTGGAAACATCAGGTTCTTAAGCAAAGCACGACCGGTTTAGTGGTGTTGAGCATTATCTCTTC
TACAGCCCCCTTTATTGGTTTGTTTGGAACGGTAGTTGAAATTTTAGAAGCGTTTAACAATTTGGGCGCGTTAGGTCAAG
CTTCTTTTGGGGTGATTGCGCCCATTATTTCTAAGGCTCTTATTGCTACCGCTGCAGGGATTTTAGCGGCCATTCCAGCC
TATTCTTTTTACTTGATTTTAAAGCGCAAGGTGTATGATTTATCGGTTTATGTGCAGATGCAAGTGGATATTTTGTCTTC
TAAAAAATAA

Upstream 100 bases:

>100_bases
GCTATCTCTAGGGCTAAAAAGCTTTTAGAGGACGCAAGCTCTGACAGGTTAGCGGTCTCTAGCGTGCTGGCTAAAATTGA
GTCTCTTTAAGGGGATAATC

Downstream 100 bases:

>100_bases
AGCTTTTAAGGGGATTTTATAAATATCTTAAATAGGGAGTTAGAAGGTTTTTATGAATTACGATAACTATTGGGATGAGG
ACAAACCAGAACTCAATATC

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFDSIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREMQSLSNILNGAQDAPEHFMFNKKRNDETKRYS
NELLQAWKHQVLKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPA
YSFYLILKRKVYDLSVYVQMQVDILSSKK

Sequences:

>Translated_189_residues
MFDSIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREMQSLSNILNGAQDAPEHFMFNKKRNDETKRYS
NELLQAWKHQVLKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPA
YSFYLILKRKVYDLSVYVQMQVDILSSKK
>Mature_189_residues
MFDSIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREMQSLSNILNGAQDAPEHFMFNKKRNDETKRYS
NELLQAWKHQVLKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPA
YSFYLILKRKVYDLSVYVQMQVDILSSKK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=212, Percent_Identity=29.7169811320755, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1786958, Length=88, Percent_Identity=44.3181818181818, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017269
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 21211; Mature: 21211

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREMQSLSNILNGAQ
CCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAPEHFMFNKKRNDETKRYSNELLQAWKHQVLKQSTTGLVVLSIISSTAPFIGLFGTVVE
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
ILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPAYSFYLILKRKVYDLSVYVQM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
QVDILSSKK
EEHHHCCCC
>Mature Secondary Structure
MFDSIVYFFNKSGFVTTLVLVWISLYLVMTLWVFLYKSIVLKIELKREMQSLSNILNGAQ
CCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAPEHFMFNKKRNDETKRYSNELLQAWKHQVLKQSTTGLVVLSIISSTAPFIGLFGTVVE
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
ILEAFNNLGALGQASFGVIAPIISKALIATAAGILAAIPAYSFYLILKRKVYDLSVYVQM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
QVDILSSKK
EEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]