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The map label for this gene is yigC [C]

Identifier: 108563421

GI number: 108563421

Start: 1050358

End: 1052208

Strand: Direct

Name: yigC [C]

Synonym: HPAG1_0996

Alternate gene names: 108563421

Gene position: 1050358-1052208 (Clockwise)

Preceding gene: 108563420

Following gene: 108563422

Centisome position: 65.8

GC content: 40.41

Gene sequence:

>1851_bases
ATGCGAGATTTTTTAAAGCTTTTAAAAAAACATAATGAATTAGAAGTCATTGACACCCCCCTTGAAGTGGATTTAGAAAT
CGCTCATCTGGCGTATATAGAAGCGAAAAAGCCTGATGGAGGCAAAGCCCTTTTATTCACGCAACCCATAAGAAAAGAGC
ATGACCAAATCAAAACCTTTGGCATGCCGGTTTTGATGAACGCTTTTGGCTCTTTCAAGCGCTTGGATCTTTTGTTAAAA
ACCCCCATAGAAAGCCTGCAACAACGCATGCAAGCGTTCTTACACTTTAGTGCTCCTAAAAATTTCACTGAGGGTTTGAA
AGTCTTAAAAGATTTATGGGATTTAAGACATATTTTCCCTAAAAAAACCGCTCGCCCTAAAGATCTCATTATCAAGCAAG
ATAAAGAAGTCAATTTGTGGGATCTGCCCGTTTTAAAAACTTGGGAAAAAGATGGCGGGGCTTTTATCACTATGGGGCAA
GTCTATACCCAAAGCTTGGATCATAAAAAAAAGAATTTAGGCATGTACCGCTTGCAAGTTTATGATAAAAACCATTTAGG
CTTGCACTGGCAAATCCATAAAGACTCCCAACTCTTTTTCCACGAATACGCTAAGGCTAAAGTCAAAATGCCTGTCAGTA
TCGCTATTGGTGGGGATTTGCTCTATACATGGTGCGCGACAGCCCCCTTACCTTATGGGATTTATGAACTCATGCTCTAT
GGGTTTATGAGAGGAAAAAAAGCGCGCGTGATGCCATGCCTAAGCAACCCTTTAAGCGTGCCAAGCGACTGCGATATTGT
GATAGAAGGGTTTGTGGATTGCGAAAAGTTAGAGCTTGAAGGGCCTTTTGGGGATCACACGGGCTATTATACCCCCATTG
AGCCTTACCCTGTTTTAGAAGTCAAAACCATTAGCTATAAAAAAGATTCCATTTATTTAGCCACTGTTGTGGGTAAGCCC
CCTTTAGAAGACAAATACATGGGGTATTTGACTGAACGCTTGTTCTTGCCTTTGCTCCAAATGAACGCTCCCAATCTCAT
AGATTATTACATGCCAGAAAATGGGGTGTTTCATAATTTGATTTTAGCCAAAATACACACGCGCTATAACGCTCATGCCA
AACAAGTCATGCATGCTTTTTGGGGTGTGGGGCAGATGAGTTTTGTCAAACATGCGATTTTTGTCAATGAAGACGCTCCC
AATCTAAGAGACACCAACGCTATCATTGAGTATATACTAGAGAATTTTTCTAAAGAAAACGCGCTCATCTCTCAAGGCAT
ATGCGACGCCTTAGATCATGCAAGCCCTGAATACGCTATGGGGGGGAAACTCGGTATTGATGCGACCTCTAAAAGCAATA
CCCCCTACCCCACGCTTTTAAACGATAGTGCCTTATTAGCGCTTTTACAAGATAAAATGCAAAATATCGTTCTTTTGAAG
CAATATTACCCGCACACCCGTAACCCCATTTGCGTCATTAGCGTGGAAAAGAAAGACAAAAGCGTCATTGAATTGGCTAA
AAACTTGCTCGGTTTTGAAGAGCATTTACGCATTGTCATCTTTGTAGAGCATACCAGCAACGATTTGAACAACCCCTACA
TGCTGTTATGGCGCATCGTTAATAATATTGATGCACAGCGTGATATCCTCACCTCTAAACATTGTTTTTTTATAGACGCT
ACCAATAAGGGCATTATGGATAAACATTTTAGAGAATGGCCTACAGAAACCAATTGCTCCATGGAAGTCATAGAAAATTT
GAAAAAGAAAGGGCTTTTAAAAGATTTTGAAACTTTAAATCAAAAATTCCATCTCACGCATTCTTTCAGCACGCACAAAG
AAGATCTATAA

Upstream 100 bases:

>100_bases
CATTATTGTAGATGAAGAAGTTTCTTTGGAAGTTTTAGAAGAGCTTAAAAATATTCCTGCATGCTTAAGCGTTCATTATG
TGGTTATTTAAGGTAGTTGG

Downstream 100 bases:

>100_bases
AGAAGAAGCCATAAAGAAGGATTATGTTAGATTACCGCCAAAAAATTGATACCCTCATCACCAAAATAGAAAAGGCTCGC
ACCGCCTATTCAAGGCACCA

Product: hypothetical protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MRDFLKLLKKHNELEVIDTPLEVDLEIAHLAYIEAKKPDGGKALLFTQPIRKEHDQIKTFGMPVLMNAFGSFKRLDLLLK
TPIESLQQRMQAFLHFSAPKNFTEGLKVLKDLWDLRHIFPKKTARPKDLIIKQDKEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFMRGKKARVMPCLSNPLSVPSDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYILENFSKENALISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDSALLALLQDKMQNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEHLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGLLKDFETLNQKFHLTHSFSTHKEDL

Sequences:

>Translated_616_residues
MRDFLKLLKKHNELEVIDTPLEVDLEIAHLAYIEAKKPDGGKALLFTQPIRKEHDQIKTFGMPVLMNAFGSFKRLDLLLK
TPIESLQQRMQAFLHFSAPKNFTEGLKVLKDLWDLRHIFPKKTARPKDLIIKQDKEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFMRGKKARVMPCLSNPLSVPSDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYILENFSKENALISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDSALLALLQDKMQNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEHLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGLLKDFETLNQKFHLTHSFSTHKEDL
>Mature_616_residues
MRDFLKLLKKHNELEVIDTPLEVDLEIAHLAYIEAKKPDGGKALLFTQPIRKEHDQIKTFGMPVLMNAFGSFKRLDLLLK
TPIESLQQRMQAFLHFSAPKNFTEGLKVLKDLWDLRHIFPKKTARPKDLIIKQDKEVNLWDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
GFMRGKKARVMPCLSNPLSVPSDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYILENFSKENALISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDSALLALLQDKMQNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEHLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGIMDKHFREWPTETNCSMEVIENLKKKGLLKDFETLNQKFHLTHSFSTHKEDL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=467, Percent_Identity=34.0471092077088, Blast_Score=265, Evalue=6e-72,
Organism=Saccharomyces cerevisiae, GI6320748, Length=324, Percent_Identity=25, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 70874; Mature: 70874

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFLKLLKKHNELEVIDTPLEVDLEIAHLAYIEAKKPDGGKALLFTQPIRKEHDQIKTF
CHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHC
GMPVLMNAFGSFKRLDLLLKTPIESLQQRMQAFLHFSAPKNFTEGLKVLKDLWDLRHIFP
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC
KKTARPKDLIIKQDKEVNLWDLPVLKTWEKDGGAFITMGQVYTQSLDHKKKNLGMYRLQV
CCCCCCCCCEEECCCCCCEECCCCEEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFMRGKKARVMPCLSNPLSVPSDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLE
HHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISYKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNL
EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
ILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYILENFSKEN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCH
ALISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDSALLALLQDKMQNIVLLK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHEEEEH
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEHLRIVIFVEHTSNDLNNPYMLLWRIV
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHCCEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQRDILTSKHCFFIDATNKGIMDKHFREWPTETNCSMEVIENLKKKGLLKDFETLN
HCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHC
QKFHLTHSFSTHKEDL
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MRDFLKLLKKHNELEVIDTPLEVDLEIAHLAYIEAKKPDGGKALLFTQPIRKEHDQIKTF
CHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHC
GMPVLMNAFGSFKRLDLLLKTPIESLQQRMQAFLHFSAPKNFTEGLKVLKDLWDLRHIFP
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC
KKTARPKDLIIKQDKEVNLWDLPVLKTWEKDGGAFITMGQVYTQSLDHKKKNLGMYRLQV
CCCCCCCCCEEECCCCCCEECCCCEEEECCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGIYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFMRGKKARVMPCLSNPLSVPSDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLE
HHHCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISYKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLQMNAPNLIDYYMPENGVFHNL
EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
ILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYILENFSKEN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCH
ALISQGICDALDHASPEYAMGGKLGIDATSKSNTPYPTLLNDSALLALLQDKMQNIVLLK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHEEEEH
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEHLRIVIFVEHTSNDLNNPYMLLWRIV
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHCCEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQRDILTSKHCFFIDATNKGIMDKHFREWPTETNCSMEVIENLKKKGLLKDFETLN
HCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHC
QKFHLTHSFSTHKEDL
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]