Click here to switch to the map view.

The map label for this gene is 108562843

Identifier: 108562843

GI number: 108562843

Start: 427657

End: 428193

Strand: Direct

Name: 108562843

Synonym: HPAG1_0418

Alternate gene names: NA

Gene position: 427657-428193 (Clockwise)

Preceding gene: 108562842

Following gene: 108562844

Centisome position: 26.79

GC content: 38.55

Gene sequence:

>537_bases
ATGGCTATTTTTGGGGAATTAAGCTCGCTTGGGCATTTGTTTAGAAAAACACAAGAATTAGAAATTTTGCATGAGTATTT
AAAAGAGATCATGCAAAAGGGTAGTAAAGCGAATCAAAGGGTTTTAAACCTCGCTACCAATACAGAATTTCAAGTGCCTT
TAGGGCATGGCATCTTTAGCATAGAGCAGAGTTATTGTTTAGAGCATGCCAAAGAAAGCGAGAAAGGCTTTTTTGAAAGC
CACAAAAAATATGTGGATTTCCAGCTGATTGTCAAAGGCGTTGAGGGGGCTAAAGCGGTGGGTATCAATCAAGCTGTCAT
TAAAAACCCTTACGATGAAAAAAAAGACCTAATCGTTTATGAGCCGGTTAGTGAAGCTTCTTTTTTGCGTTTGCATGCGG
GCATGCTGGCTATTTTTTTTGAAAACGATGCGCATGCGTTGAGGTTTTATGGAGAGTCTTTTGAAAAATATAGGGAAGAG
CCGATTTTTAAAGCGGTCGTTAAAGCGCCCAAAGGATTGATCAAATTAAAATTATGA

Upstream 100 bases:

>100_bases
GATGGGAATTTTGGCATTCAAATCACGGATATTGGCACTAAAAAAGAACGCTTAGAACAATTGAAACATTAAATCTTTTT
ATCATAAAAAGGAAAGGAAT

Downstream 100 bases:

>100_bases
AATTGGTGAGTCTTGTTATAGTTTTTTGTTGTTTTTTAGGGGCTGTAGAGTTGCCTGGAATTTATCAAACTCAAGAATTT
TTATACATAAAAAGCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MAIFGELSSLGHLFRKTQELEILHEYLKEIMQKGSKANQRVLNLATNTEFQVPLGHGIFSIEQSYCLEHAKESEKGFFES
HKKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKKDLIVYEPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREE
PIFKAVVKAPKGLIKLKL

Sequences:

>Translated_178_residues
MAIFGELSSLGHLFRKTQELEILHEYLKEIMQKGSKANQRVLNLATNTEFQVPLGHGIFSIEQSYCLEHAKESEKGFFES
HKKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKKDLIVYEPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREE
PIFKAVVKAPKGLIKLKL
>Mature_177_residues
AIFGELSSLGHLFRKTQELEILHEYLKEIMQKGSKANQRVLNLATNTEFQVPLGHGIFSIEQSYCLEHAKESEKGFFESH
KKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKKDLIVYEPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREEP
IFKAVVKAPKGLIKLKL

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20309; Mature: 20178

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFGELSSLGHLFRKTQELEILHEYLKEIMQKGSKANQRVLNLATNTEFQVPLGHGIFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCEEEEECCCCHHH
IEQSYCLEHAKESEKGFFESHKKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKKDLIVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCHHHHCCCCCCCCCEEEE
EPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREEPIFKAVVKAPKGLIKLKL
CCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
AIFGELSSLGHLFRKTQELEILHEYLKEIMQKGSKANQRVLNLATNTEFQVPLGHGIFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCEEEEECCCCHHH
IEQSYCLEHAKESEKGFFESHKKYVDFQLIVKGVEGAKAVGINQAVIKNPYDEKKDLIVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCHHHHCCCCCCCCCEEEE
EPVSEASFLRLHAGMLAIFFENDAHALRFYGESFEKYREEPIFKAVVKAPKGLIKLKL
CCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA