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The map label for this gene is 108562833

Identifier: 108562833

GI number: 108562833

Start: 418888

End: 420177

Strand: Direct

Name: 108562833

Synonym: HPAG1_0408

Alternate gene names: NA

Gene position: 418888-420177 (Clockwise)

Preceding gene: 108562832

Following gene: 108562834

Centisome position: 26.24

GC content: 37.98

Gene sequence:

>1290_bases
GTGTTGAAAGAGCGTTTGAAGGCCTTTTTTAGTGCGGACTTTGTTTTCACTTTAATTTTTGCCCTTTTCTTTCTCACTTC
GTTTAAAAAGCCTTTAACTCAAGTTCTGTTGATTGTTTTAATGGTTTTTTTGTTTCTTAGGTGTTATTTCCAGGCGTCTT
TGAAAGAGACCTTTAGAATCAACCACCTAAAAACCATGCCTTTCAAATGGCTCACTCTGGCTTTTTTGGGCGTGTTTTTA
AGCGTCTTCCCTAACATGTTTAACATGTATGATAGCCAAACTTTCCGCTACAATTTGTTCGCTCTAAACATGTCCTTAAC
TTACGCTTGCGGGGCGTTATGCTTGCTTTTTGCGAGCCGTTTAAGAATCAAATTGAATCAAAAAGTCCTTTTTTATAGCA
TGGCTGTTGCAAATTTCATTAACGGCTTGCTTTCATTGGTGCAAAAAATTTATTTTAACATGCCCAGAGCGCAAGGGTTT
AGCACGGTTAAGGAGTATGTGGTTTTAGTGAGCGTGTCCATTTTAGGCTGTTATATTTATGCGCTTTATTCGCACAATCA
AAAAGAAAAACTTTTTTTCACTCTTTCTGTTTTCGTGGGGTTTTTAGTCGTTATTTTAAGCGCTACAAGGAGCGCGACAA
TTGCTTTTATAGCTACTTTTTTGATCCTGTCTTGCTTTATTTTATACGCCAAAAAATCGATCAGACCATTGGGTTATATG
GTGGTTGTGAGTCTTGTTTTGAGCGCTTTGTATGTGGGGAGTAACGCTTTAGAAAAGAGGGGGGCAATAGAGCAATCTAG
GGTTCAAAACCAAAGCTTTGAAGAAGATCTGAAACGCTACGCTAAAAAGGACGCTGATAGCAGTATCGGGTGGCGTTTGG
AGCGCTGGAAAGAAGCCCTAACGGTTTTGCGTTTAAGGCCCTTTTTTGGTATGGCCGCTAGCGAGAAATGCCAGAGGTTA
GAAGAGATTTTATCCTTATCAAAGTCTTATAGAGCCAAAGATTTGATTCTTTGTTATGAAAGGTACGACAATCAAATCAT
TCATGTTCTAGCCACTAGGGGGATCATAGGCTTTTTAATCTGGCTCTTTTTTTTATTAGTTATTGTAAAGATTTTTTGGA
GCGGGATCAAGCAAAACTCTTTAATATCACTCTTTATATTAACGACACTCACTTTTTACCTCATTTTTGGCATCGGGTTT
GACCCCTTTGATTTCTTCATTACGGGAAGTTTTTTTGTAGGAATGGTCATGATGGCTGTTTTTTTAAAAAAAGATAAAAG
CGCTTTTTAG

Upstream 100 bases:

>100_bases
ATACATCAAACGCACTAATCATGCGCGTTATGTGGTTTTGATTGAAAAGCTAGGCATTAAAGACAGATAATTTTTATCGG
TTTTAGGGTGTGGAGAGTTT

Downstream 100 bases:

>100_bases
CATCAAGGGGTTTGATGTTAGTCAAGCGGTAGTTTCTTAACAATGCGTTCTTAGGGGGATTTAAGGGGTAAGATAAAAAC
TTATGCTATAATGCGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLKERLKAFFSADFVFTLIFALFFLTSFKKPLTQVLLIVLMVFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFLGVFL
SVFPNMFNMYDSQTFRYNLFALNMSLTYACGALCLLFASRLRIKLNQKVLFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSHNQKEKLFFTLSVFVGFLVVILSATRSATIAFIATFLILSCFILYAKKSIRPLGYM
VVVSLVLSALYVGSNALEKRGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSKSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLIFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF

Sequences:

>Translated_429_residues
MLKERLKAFFSADFVFTLIFALFFLTSFKKPLTQVLLIVLMVFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFLGVFL
SVFPNMFNMYDSQTFRYNLFALNMSLTYACGALCLLFASRLRIKLNQKVLFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSHNQKEKLFFTLSVFVGFLVVILSATRSATIAFIATFLILSCFILYAKKSIRPLGYM
VVVSLVLSALYVGSNALEKRGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSKSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLIFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF
>Mature_429_residues
MLKERLKAFFSADFVFTLIFALFFLTSFKKPLTQVLLIVLMVFLFLRCYFQASLKETFRINHLKTMPFKWLTLAFLGVFL
SVFPNMFNMYDSQTFRYNLFALNMSLTYACGALCLLFASRLRIKLNQKVLFYSMAVANFINGLLSLVQKIYFNMPRAQGF
STVKEYVVLVSVSILGCYIYALYSHNQKEKLFFTLSVFVGFLVVILSATRSATIAFIATFLILSCFILYAKKSIRPLGYM
VVVSLVLSALYVGSNALEKRGAIEQSRVQNQSFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAASEKCQRL
EEILSLSKSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWSGIKQNSLISLFILTTLTFYLIFGIGF
DPFDFFITGSFFVGMVMMAVFLKKDKSAF

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49529; Mature: 49529

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCC
>Mature Secondary Structure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HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA