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The map label for this gene is 108562806

Identifier: 108562806

GI number: 108562806

Start: 393464

End: 394066

Strand: Direct

Name: 108562806

Synonym: HPAG1_0381

Alternate gene names: NA

Gene position: 393464-394066 (Clockwise)

Preceding gene: 108562797

Following gene: 108562815

Centisome position: 24.65

GC content: 36.82

Gene sequence:

>603_bases
GTGTATTATTTAAGAATTTTAATACTGAGTATGAGTTTTTTGAATATTTTAAATGCTGAAAATTTGAGTTATATGTCTTC
TTCTTATCAAATAGGCACGGTGTTTATGCGCCCTTTAAACACCAACAAGCTTTTGCAAGGGGCTTCAATCCTTCAAGGCT
ATGAAGTGAATCCTAAAAACGATTGGGCTTATTCTAGGTATTATTTCTTTATAGATTATGGCAATGTGCTTTTTAATAAT
GACTCTACTTTACAAGCGAACATGTTCACTTATGGGGTGGGAGGGGATTTCATGGTCGCCTACGCTAAAAACCCTATCAA
CCGCTGGGCTTTTTTCTTTGGCTTGCAACTGGCCGCTAACACATGGATACTCAACAATAAAGTCAAAGATTTGGTGGTGA
ATACTTGGGATTCATTAAAAGATTTCAATTTTCACAACACTTATTTCAGGGCTATTGGGAAATTTGGGGTGCAGTTTCGC
ACGATCGTTTTGTATCATAAGGTGGATGTAGAAATTGGCATGAAAATCTTTCTAACCCCTGAAAGGCGCAGCTTGTTTGA
AAGGAGCTTTTTGTTTTTTGTTTCGCATTCGTGGCATTTTTAA

Upstream 100 bases:

>100_bases
TATGATAATAGTTCAAAAATAATAAGACACCCCTAACTTTTGAGTGTGATAAAGGGTCATTGGATGGTTTGAAAAAGAAA
GACAAGGATTTTACAAGCAA

Downstream 100 bases:

>100_bases
ATGGCGGAGAGAGAGGGATTCGAACCCTCGAAGGCTTGCACCTTACACGCGTTCCAGGCGTGCTCCTTCAACCACTCGGA
CATCTCCCCTTAAAAAGGGC

Product: outer membrane protein HorD

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Protein HopB

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYYLRILILSMSFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFHNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF

Sequences:

>Translated_200_residues
MYYLRILILSMSFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFHNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF
>Mature_200_residues
MYYLRILILSMSFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKNDWAYSRYYFFIDYGNVLFNN
DSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAANTWILNNKVKDLVVNTWDSLKDFNFHNTYFRAIGKFGVQFR
TIVLYHKVDVEIGMKIFLTPERRSLFERSFLFFVSHSWHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23569; Mature: 23569

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYLRILILSMSFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKN
CHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCHHHCCCHHHCCEECCCCC
DWAYSRYYFFIDYGNVLFNNDSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAAN
CCEEEEEEEEEEECEEEECCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCC
TWILNNKVKDLVVNTWDSLKDFNFHNTYFRAIGKFGVQFRTIVLYHKVDVEIGMKIFLTP
EEEECCCHHHHEEECCHHHCCCCCCHHHHHHHHHCCCEEEEEEEEEEECEEECEEEEEEC
ERRSLFERSFLFFVSHSWHF
HHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure
MYYLRILILSMSFLNILNAENLSYMSSSYQIGTVFMRPLNTNKLLQGASILQGYEVNPKN
CHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCHHHCCCHHHCCEECCCCC
DWAYSRYYFFIDYGNVLFNNDSTLQANMFTYGVGGDFMVAYAKNPINRWAFFFGLQLAAN
CCEEEEEEEEEEECEEEECCCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCC
TWILNNKVKDLVVNTWDSLKDFNFHNTYFRAIGKFGVQFRTIVLYHKVDVEIGMKIFLTP
EEEECCCHHHHEEECCHHHCCCCCCHHHHHHHHHCCCEEEEEEEEEEECEEECEEEEEEC
ERRSLFERSFLFFVSHSWHF
HHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA