| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ysnE [H]
Identifier: 103488308
GI number: 103488308
Start: 2986552
End: 2987019
Strand: Reverse
Name: ysnE [H]
Synonym: Sala_2831
Alternate gene names: 103488308
Gene position: 2987019-2986552 (Counterclockwise)
Preceding gene: 103488309
Following gene: 103488306
Centisome position: 89.29
GC content: 67.09
Gene sequence:
>468_bases GTGAGCGACGCCTGGCGGATCGTCGAGGATGATCTGTCGGGCGCGGGGATCCGCGCGCTGCTCGAGGCGCATTTTGCGGG GATGCTCGCCCATTCGCCCGTGGGAAGCTGTCACTTCCTCGATTTCGACGGGCTGCGCGCGGACGACGTGACCTTCTGGT CGATCCACAAGGGTGGCGACCTCGCGGGCTGCGGCGCGCTCAAGATGCTGGGCGGCAGGCACGGTGAAATCAAGTCGATG CGCACTGCCGAGGCCTTTCTGCGCCAGGGCGTCGCCGCGCGGATGCTCAGCCATATCATGGACGAGGCGCGGCGCCGCGG CCTTGAACGGCTCAGCCTCGAAACGGGGTCGGGCGCGGCGTTCGAACCCGCGATCGCCCTCTATCGCCGCCATGGCTTTG CGGATTGCGAGCCTTTTGCGGGCTACAAACCCGACCCTTTCAGCCGGTTCATGACGCGCGCCATCTAG
Upstream 100 bases:
>100_bases TCAAGGACAATCGTGACCTGCCCGATCCCGTTCAGGGCTGGTCGCCCGAACGGTCGAAGCGGCTGGCGCATGCCTGTCTT CAGACGCTGGACCATATTTT
Downstream 100 bases:
>100_bases ACGCATAAGGGGGCCCGGATGATACTCCGGACCCCGCATTTTCATCAGCACCTGTGTCGCTTACGCGGCCTTCTTGTCCT CGATCACCGGTGCCGCGCTG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSDAWRIVEDDLSGAGIRALLEAHFAGMLAHSPVGSCHFLDFDGLRADDVTFWSIHKGGDLAGCGALKMLGGRHGEIKSM RTAEAFLRQGVAARMLSHIMDEARRRGLERLSLETGSGAAFEPAIALYRRHGFADCEPFAGYKPDPFSRFMTRAI
Sequences:
>Translated_155_residues MSDAWRIVEDDLSGAGIRALLEAHFAGMLAHSPVGSCHFLDFDGLRADDVTFWSIHKGGDLAGCGALKMLGGRHGEIKSM RTAEAFLRQGVAARMLSHIMDEARRRGLERLSLETGSGAAFEPAIALYRRHGFADCEPFAGYKPDPFSRFMTRAI >Mature_154_residues SDAWRIVEDDLSGAGIRALLEAHFAGMLAHSPVGSCHFLDFDGLRADDVTFWSIHKGGDLAGCGALKMLGGRHGEIKSMR TAEAFLRQGVAARMLSHIMDEARRRGLERLSLETGSGAAFEPAIALYRRHGFADCEPFAGYKPDPFSRFMTRAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788242, Length=151, Percent_Identity=52.317880794702, Blast_Score=160, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 16955; Mature: 16823
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAWRIVEDDLSGAGIRALLEAHFAGMLAHSPVGSCHFLDFDGLRADDVTFWSIHKGGD CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCC LAGCGALKMLGGRHGEIKSMRTAEAFLRQGVAARMLSHIMDEARRRGLERLSLETGSGAA CCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC FEPAIALYRRHGFADCEPFAGYKPDPFSRFMTRAI HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SDAWRIVEDDLSGAGIRALLEAHFAGMLAHSPVGSCHFLDFDGLRADDVTFWSIHKGGD CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEECCCC LAGCGALKMLGGRHGEIKSMRTAEAFLRQGVAARMLSHIMDEARRRGLERLSLETGSGAA CCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC FEPAIALYRRHGFADCEPFAGYKPDPFSRFMTRAI HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]