The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488246

Identifier: 103488246

GI number: 103488246

Start: 2921603

End: 2923579

Strand: Reverse

Name: 103488246

Synonym: Sala_2769

Alternate gene names: NA

Gene position: 2923579-2921603 (Counterclockwise)

Preceding gene: 103488247

Following gene: 103488245

Centisome position: 87.4

GC content: 69.45

Gene sequence:

>1977_bases
ATGATGCGACGCAAGAGCCATCTTTTCCGGTCGGGCGCGCTTGTCGCGATGGGCACGCTGCTGCTGACCGCGTGCGGCGG
CGGGGGCGGCGGCACGCCCACGCCATCGCCCGCTCCGACGCCGACGCCCCCGCCGACCGGGGGGCTCTACACCCCGCCCG
CTGCCGAATCGCTCAGCGTCGGCGACGTGCAGACGATCCTCGCCAATGCGATCTCGGAGGCGCAGGCGCGCGGGCTGCCC
TCGGTGATCGCGGTGACCGACCGCGTCGGCAATGTGCTGGCGGTGTTCCGCATGAACGGCGCGCGCGCGACCGCGACGAC
CTCGGCGGCGCCCAATGGCGACAATATCGACGCGCAGAATGTCACCTTTCCGGCCGAAGGCGGCGCGATCGCCAAGGCGG
TGACGGGCGCTTATCTCTCAAGCGGCGGCAACGCCTTTTCGACGCGCACCGCAAGCCAGATCGTCCAGGAACATTTTCCG
CCCGCGCCCACCACCGTCGGCCTCGAAAGCGGCCCGCTGTTCGGCGTGCAGTTCAGCCAGCTGCCGTGCAGCGACCTGTC
TGCGCGCTTCGGCGCCGCGGGACCGGCCGCGCTGATCGGTCCGAAACGCTCGCCGCTCGGTCTCGCCGCCGATCCCGGCG
GACTGCCGCTCTACAAGAATGGCGTACTCGTCGGCGGCATCGGGGTGATGGGCGACGGCGTCTATGGCAGCGACCCCGAT
ATCCTCGACATCGACGAGGATGACGAGGAGTTCATCGCGCTTGCGGGAACGCGCGGGTTCGAGGCGCCAAGCACGATCAC
CGCCGACAGGATTGCCGTCGACGGGACGACCTTGCGCTTTTCGGACGCGACCTTCGCCGGGGTGATGACAAGCGGCGGCG
CGAGTTTCGCGAGCTTCAACGGCAGCGCGGGCAATCTCGTCGCCGTCATCGGCTATGCCAATGCCGCGATCACCGCAGGG
GTTGTCTATGGCAGCGAAGCGTCGGGCATCCGCGCCTCGACGCCGGCCGAATTTTCGAACCGCGACGCCTTCATCCTCAC
CGACGGCAGCGGCGCCAACCGCTACCCGGTCCGCGCGGGCACCGACGGCGCGAGCGTCGCGGCGCCGCTGACGGCGGCCG
AGGCGCGCGCGGTGCTCGAGGAAGCCTTTGCTGTGATGAGCCGCGCGCGCGCGCAAATCCGCCGCCCGCTCGACAGCCGC
GCGCAGGTGACGATCAGCCTCGTCGACACGCACGGCGCGGTGCTCGGCATCGTCCGCTCGCCTGACGCGCCGATCTTCGG
CACCGACGTCTCCTTGCAGAAAGCGCGCACCGCCGCCTTTTTCTCGGGCGCACAGGCGGCGACCGAGCTGTCGGCCAACG
CGAGCGCCGACGTCGCCGCCTTCGTGCCCGCGGTGCGCAGTTTCCTGAACGATCCCGCCGCGCTCACCGGCGCCGTTGCA
TTTGCCGACCGCTCGGGCGGCAATCTGTCGCGCCCCTATTTCCCCGATGGTGAGGTCGGGCGTCCGCACGGGCCGCTGTC
GCGCCCGATCGCGCAGTTCAATCCCTTTTCGACCGGGCTGCAATCGGCGCTGATCATCGGCAATCTGGGCGCGCATCTGG
GCTTTGTGTCGGGCGCGAGCCCGACCGACACGCCGCAGCGCTGCACCACCCTGCCCGACGCCGCGCCGGGGCAGAACCGG
CTCCAGAACGGCATTCAGATCTTCCCCGGATCGGTGCCCATCTATCGCGGTTCGACGCTGGTCGGCGCCATCGGCGTGTC
GGGCGACGGCATCGACCAGGACGATATGATCAGTTTTCTGGGCGCGCACAACGCCGGGGCGCGCATCGGCGGCATCGGCA
ATGCTCCCAAGGCCATCCGCGCCGACAATGTCGTCGTGACGCTCGCCGACAATCGCACGGTGCGCCTGCGCTATATCAGT
TGTCCCTTTGCGCCTTTCCTCGACACCGCGCAGCAAAATGTCTGCGACGGGCTATAG

Upstream 100 bases:

>100_bases
CGTGCCTATGCTGCGGTGAAAGACCCCAATGCCTATAAGCCCGCCGAGTTTCAGGCGTCGTTCGCCAGCGCGGTGCGCGC
GATCGGGGCGCTCCGCTAAG

Downstream 100 bases:

>100_bases
GCGATGATGACGGGGGGCAGCCTGTGGCCGGTCATCGCGACGCTCGCGGCGCAGGGTGCGCCGGGGACCGAAGCGCCGTT
GCCGCCGCCCGCGCCTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MMRRKSHLFRSGALVAMGTLLLTACGGGGGGTPTPSPAPTPTPPPTGGLYTPPAAESLSVGDVQTILANAISEAQARGLP
SVIAVTDRVGNVLAVFRMNGARATATTSAAPNGDNIDAQNVTFPAEGGAIAKAVTGAYLSSGGNAFSTRTASQIVQEHFP
PAPTTVGLESGPLFGVQFSQLPCSDLSARFGAAGPAALIGPKRSPLGLAADPGGLPLYKNGVLVGGIGVMGDGVYGSDPD
ILDIDEDDEEFIALAGTRGFEAPSTITADRIAVDGTTLRFSDATFAGVMTSGGASFASFNGSAGNLVAVIGYANAAITAG
VVYGSEASGIRASTPAEFSNRDAFILTDGSGANRYPVRAGTDGASVAAPLTAAEARAVLEEAFAVMSRARAQIRRPLDSR
AQVTISLVDTHGAVLGIVRSPDAPIFGTDVSLQKARTAAFFSGAQAATELSANASADVAAFVPAVRSFLNDPAALTGAVA
FADRSGGNLSRPYFPDGEVGRPHGPLSRPIAQFNPFSTGLQSALIIGNLGAHLGFVSGASPTDTPQRCTTLPDAAPGQNR
LQNGIQIFPGSVPIYRGSTLVGAIGVSGDGIDQDDMISFLGAHNAGARIGGIGNAPKAIRADNVVVTLADNRTVRLRYIS
CPFAPFLDTAQQNVCDGL

Sequences:

>Translated_658_residues
MMRRKSHLFRSGALVAMGTLLLTACGGGGGGTPTPSPAPTPTPPPTGGLYTPPAAESLSVGDVQTILANAISEAQARGLP
SVIAVTDRVGNVLAVFRMNGARATATTSAAPNGDNIDAQNVTFPAEGGAIAKAVTGAYLSSGGNAFSTRTASQIVQEHFP
PAPTTVGLESGPLFGVQFSQLPCSDLSARFGAAGPAALIGPKRSPLGLAADPGGLPLYKNGVLVGGIGVMGDGVYGSDPD
ILDIDEDDEEFIALAGTRGFEAPSTITADRIAVDGTTLRFSDATFAGVMTSGGASFASFNGSAGNLVAVIGYANAAITAG
VVYGSEASGIRASTPAEFSNRDAFILTDGSGANRYPVRAGTDGASVAAPLTAAEARAVLEEAFAVMSRARAQIRRPLDSR
AQVTISLVDTHGAVLGIVRSPDAPIFGTDVSLQKARTAAFFSGAQAATELSANASADVAAFVPAVRSFLNDPAALTGAVA
FADRSGGNLSRPYFPDGEVGRPHGPLSRPIAQFNPFSTGLQSALIIGNLGAHLGFVSGASPTDTPQRCTTLPDAAPGQNR
LQNGIQIFPGSVPIYRGSTLVGAIGVSGDGIDQDDMISFLGAHNAGARIGGIGNAPKAIRADNVVVTLADNRTVRLRYIS
CPFAPFLDTAQQNVCDGL
>Mature_658_residues
MMRRKSHLFRSGALVAMGTLLLTACGGGGGGTPTPSPAPTPTPPPTGGLYTPPAAESLSVGDVQTILANAISEAQARGLP
SVIAVTDRVGNVLAVFRMNGARATATTSAAPNGDNIDAQNVTFPAEGGAIAKAVTGAYLSSGGNAFSTRTASQIVQEHFP
PAPTTVGLESGPLFGVQFSQLPCSDLSARFGAAGPAALIGPKRSPLGLAADPGGLPLYKNGVLVGGIGVMGDGVYGSDPD
ILDIDEDDEEFIALAGTRGFEAPSTITADRIAVDGTTLRFSDATFAGVMTSGGASFASFNGSAGNLVAVIGYANAAITAG
VVYGSEASGIRASTPAEFSNRDAFILTDGSGANRYPVRAGTDGASVAAPLTAAEARAVLEEAFAVMSRARAQIRRPLDSR
AQVTISLVDTHGAVLGIVRSPDAPIFGTDVSLQKARTAAFFSGAQAATELSANASADVAAFVPAVRSFLNDPAALTGAVA
FADRSGGNLSRPYFPDGEVGRPHGPLSRPIAQFNPFSTGLQSALIIGNLGAHLGFVSGASPTDTPQRCTTLPDAAPGQNR
LQNGIQIFPGSVPIYRGSTLVGAIGVSGDGIDQDDMISFLGAHNAGARIGGIGNAPKAIRADNVVVTLADNRTVRLRYIS
CPFAPFLDTAQQNVCDGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66550; Mature: 66550

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRKSHLFRSGALVAMGTLLLTACGGGGGGTPTPSPAPTPTPPPTGGLYTPPAAESLSV
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDVQTILANAISEAQARGLPSVIAVTDRVGNVLAVFRMNGARATATTSAAPNGDNIDAQN
CHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCC
VTFPAEGGAIAKAVTGAYLSSGGNAFSTRTASQIVQEHFPPAPTTVGLESGPLFGVQFSQ
EEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECC
LPCSDLSARFGAAGPAALIGPKRSPLGLAADPGGLPLYKNGVLVGGIGVMGDGVYGSDPD
CCCHHHHHHCCCCCCHHEECCCCCCCCEECCCCCCCEEECCEEEECCEEEECCCCCCCCC
ILDIDEDDEEFIALAGTRGFEAPSTITADRIAVDGTTLRFSDATFAGVMTSGGASFASFN
EEECCCCCCCEEEEECCCCCCCCCCEECCEEEECCCEEEECCCEEEEEEECCCCCEEECC
GSAGNLVAVIGYANAAITAGVVYGSEASGIRASTPAEFSNRDAFILTDGSGANRYPVRAG
CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECC
TDGASVAAPLTAAEARAVLEEAFAVMSRARAQIRRPLDSRAQVTISLVDTHGAVLGIVRS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEC
PDAPIFGTDVSLQKARTAAFFSGAQAATELSANASADVAAFVPAVRSFLNDPAALTGAVA
CCCCEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHEEEE
FADRSGGNLSRPYFPDGEVGRPHGPLSRPIAQFNPFSTGLQSALIIGNLGAHLGFVSGAS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHEEEEECCHHHHEECCCCC
PTDTPQRCTTLPDAAPGQNRLQNGIQIFPGSVPIYRGSTLVGAIGVSGDGIDQDDMISFL
CCCCHHHHCCCCCCCCCHHHHCCCCEECCCCCCEEECCEEEEEEECCCCCCCHHHHHHHH
GAHNAGARIGGIGNAPKAIRADNVVVTLADNRTVRLRYISCPFAPFLDTAQQNVCDGL
HCCCCCCEECCCCCCCCCEECCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRRKSHLFRSGALVAMGTLLLTACGGGGGGTPTPSPAPTPTPPPTGGLYTPPAAESLSV
CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDVQTILANAISEAQARGLPSVIAVTDRVGNVLAVFRMNGARATATTSAAPNGDNIDAQN
CHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCCCC
VTFPAEGGAIAKAVTGAYLSSGGNAFSTRTASQIVQEHFPPAPTTVGLESGPLFGVQFSQ
EEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECC
LPCSDLSARFGAAGPAALIGPKRSPLGLAADPGGLPLYKNGVLVGGIGVMGDGVYGSDPD
CCCHHHHHHCCCCCCHHEECCCCCCCCEECCCCCCCEEECCEEEECCEEEECCCCCCCCC
ILDIDEDDEEFIALAGTRGFEAPSTITADRIAVDGTTLRFSDATFAGVMTSGGASFASFN
EEECCCCCCCEEEEECCCCCCCCCCEECCEEEECCCEEEECCCEEEEEEECCCCCEEECC
GSAGNLVAVIGYANAAITAGVVYGSEASGIRASTPAEFSNRDAFILTDGSGANRYPVRAG
CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECC
TDGASVAAPLTAAEARAVLEEAFAVMSRARAQIRRPLDSRAQVTISLVDTHGAVLGIVRS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEC
PDAPIFGTDVSLQKARTAAFFSGAQAATELSANASADVAAFVPAVRSFLNDPAALTGAVA
CCCCEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHEEEE
FADRSGGNLSRPYFPDGEVGRPHGPLSRPIAQFNPFSTGLQSALIIGNLGAHLGFVSGAS
EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHEEEEECCHHHHEECCCCC
PTDTPQRCTTLPDAAPGQNRLQNGIQIFPGSVPIYRGSTLVGAIGVSGDGIDQDDMISFL
CCCCHHHHCCCCCCCCCHHHHCCCCEECCCCCCEEECCEEEEEEECCCCCCCHHHHHHHH
GAHNAGARIGGIGNAPKAIRADNVVVTLADNRTVRLRYISCPFAPFLDTAQQNVCDGL
HCCCCCCEECCCCCCCCCEECCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA