| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488177
Identifier: 103488177
GI number: 103488177
Start: 2842341
End: 2842766
Strand: Reverse
Name: 103488177
Synonym: Sala_2700
Alternate gene names: NA
Gene position: 2842766-2842341 (Counterclockwise)
Preceding gene: 103488178
Following gene: 103488175
Centisome position: 84.98
GC content: 63.85
Gene sequence:
>426_bases ATGAAGGCGCAGTCGCTACTCTTGCTCCGCATCGGAACTGGATTGCTGCTCGTCGTGTGGGGCCTTATCCGCCTCGTCAG CCCTGACAAGGGCGCGGGGGTCAGCGTCAAATATTATGCCGGGCTCGGCGCGAGCGATACGATTCAGCTCATCTGGGGCG CGATCCTGCTGGTCGTCGGACTGCTCACGGTCGTTGGTCTTTTTCGCCGTTTCGCTTACCCGGCGCAGGCGGTCATTCTG GTGACGGGGGCGCTGTCGATATGGAAATATCTGCTCGACCCGCTCGGTCTCTGGCTCCTCGACCGCGAAAGCAGCCAGGT GCTATTCTTCCCCTCGCTGGCCGTCGCGGGGGCGACGCTCGTGCTCCTCGCCTTCCGGGATGAAGACCGGCTTGCGCTCG ACCGCTTGCTGGCGCGGCGCGGTTAA
Upstream 100 bases:
>100_bases CTGGCGACGCGGATAAGGCAATTTGCCGGCCGTTTATTGTAACCAACGGGTGCATTGCCGCGAATCCACCTGTTCAATCA GCATTTCAGGGAGTCCAGAT
Downstream 100 bases:
>100_bases CGCGCGCGTTCGAGCATCGCCACAATCTCGTCCTCGCGCGTCGCGGCGCCTGCGGCCACGCGCTGCGGCCCCTCGTAGAT GTGGAGCATGCCATAGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG
Sequences:
>Translated_141_residues MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG >Mature_141_residues MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVGLLTVVGLFRRFAYPAQAVIL VTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATLVLLAFRDEDRLALDRLLARRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15304; Mature: 15304
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVG CCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LLTVVGLFRRFAYPAQAVILVTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHHHHHH VLLAFRDEDRLALDRLLARRG EEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MKAQSLLLLRIGTGLLLVVWGLIRLVSPDKGAGVSVKYYAGLGASDTIQLIWGAILLVVG CCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH LLTVVGLFRRFAYPAQAVILVTGALSIWKYLLDPLGLWLLDRESSQVLFFPSLAVAGATL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECHHHHHHHHH VLLAFRDEDRLALDRLLARRG EEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA