| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488095
Identifier: 103488095
GI number: 103488095
Start: 2757835
End: 2758287
Strand: Reverse
Name: 103488095
Synonym: Sala_2617
Alternate gene names: NA
Gene position: 2758287-2757835 (Counterclockwise)
Preceding gene: 103488096
Following gene: 103488093
Centisome position: 82.46
GC content: 64.9
Gene sequence:
>453_bases GTGAGTGGAGGCCACGTCAAGCGCAGCATCCGGCTACGGGCTGATCTGGTGCGCCGTCTCGCCGATCACGCCGCCGCGCG GAACGCCAGCCAGGCCGCGATCATCGAGGCTGCGCTGGAGTCCTTTCTGTCGCCCGATGCTGCCGAGCGACTTGAAGGAG CGCTTGCCCGCCGGCTCGACCGGCTGACCCGTGATCTTGGCCGCCTCGAATGGCATGTCGAACTGTCGAACGAGACTCTC GCGCTGTTTGTGCGAAACTGGCTCAATGCGACGCCATCGCTCCCGGATGGCGCTACGCAGGCCGCGAGGGCGCAGGGTCG TCAGCGATGGGAGCGGTTTGTAGACATGCTGAACCGGCGCATGGAGCTTGGGCCGCGGTTCAGGAACGAGATCGCTGAAG ATGTAACGAGGTCGACTCGGTCGGATCAGGACTCGGGCAGCACCAGTGAATAG
Upstream 100 bases:
>100_bases ATCAGGATGAGGATTCCGCACGGGCGAAACGCGAGGCGGAGCGGACCATGCGCCGCAATGCCCGTAACGCGTCGCTCGAC CCGGATGACGGCATCGTGCT
Downstream 100 bases:
>100_bases CTGGTGCTGCGCCCACCGGCCGGCTCCTTCTCAAGGATGCCGCGCCGGAGCAAATCGTTGATGTCGCGCAGGGCGGTATC GGACGATGCCTTGGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSGGHVKRSIRLRADLVRRLADHAAARNASQAAIIEAALESFLSPDAAERLEGALARRLDRLTRDLGRLEWHVELSNETL ALFVRNWLNATPSLPDGATQAARAQGRQRWERFVDMLNRRMELGPRFRNEIAEDVTRSTRSDQDSGSTSE
Sequences:
>Translated_150_residues MSGGHVKRSIRLRADLVRRLADHAAARNASQAAIIEAALESFLSPDAAERLEGALARRLDRLTRDLGRLEWHVELSNETL ALFVRNWLNATPSLPDGATQAARAQGRQRWERFVDMLNRRMELGPRFRNEIAEDVTRSTRSDQDSGSTSE >Mature_149_residues SGGHVKRSIRLRADLVRRLADHAAARNASQAAIIEAALESFLSPDAAERLEGALARRLDRLTRDLGRLEWHVELSNETLA LFVRNWLNATPSLPDGATQAARAQGRQRWERFVDMLNRRMELGPRFRNEIAEDVTRSTRSDQDSGSTSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16891; Mature: 16760
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGHVKRSIRLRADLVRRLADHAAARNASQAAIIEAALESFLSPDAAERLEGALARRLD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLTRDLGRLEWHVELSNETLALFVRNWLNATPSLPDGATQAARAQGRQRWERFVDMLNRR HHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MELGPRFRNEIAEDVTRSTRSDQDSGSTSE HHCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGGHVKRSIRLRADLVRRLADHAAARNASQAAIIEAALESFLSPDAAERLEGALARRLD CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLTRDLGRLEWHVELSNETLALFVRNWLNATPSLPDGATQAARAQGRQRWERFVDMLNRR HHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MELGPRFRNEIAEDVTRSTRSDQDSGSTSE HHCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA