Click here to switch to the map view.

The map label for this gene is 103488091

Identifier: 103488091

GI number: 103488091

Start: 2755019

End: 2755363

Strand: Reverse

Name: 103488091

Synonym: Sala_2613

Alternate gene names: NA

Gene position: 2755363-2755019 (Counterclockwise)

Preceding gene: 103488092

Following gene: 103488090

Centisome position: 82.37

GC content: 66.38

Gene sequence:

>345_bases
ATGAAAGCAAAGAAGACCCGGCTGCTGGCCGGGACCGCCCTCGATCGCCTCGGCGTGCTGGCCGTCACGTCCGCCGGGCT
TCTCATCACCGCGCCGGCGCACGCAGGCGGTTCGTCGATGCCCTGGGAAGCGCCCCTCCAGTCCATCCTCGAATCGATCG
AAGGCCCGGTGGCGAAGATCGTTGCCGTTATCATCATCATCGTGACCGGCCTCAGCCTCGCCTTCGGCGACACCTCGGGC
GGGTTCCGGCGGCTGATCCAGATCGTGTTCGGCCTGTCGATCGCCTTTGCCGCCAGCTCCTTCTTCCTCAGCTTCTTCAG
CTTCGGCGGCGGGGCGCTGGTGTGA

Upstream 100 bases:

>100_bases
ACGGCCGCCGCCTCGCCGAACTGGCCCGCGTCGAAGGGCTCGGCGCCGATGGCGACTACCGGCTCATCCTTCTCCCATCC
GAACAAGCAGGAGACTCCAA

Downstream 100 bases:

>100_bases
TGAACAGCGCGGACGACATCCCGGGCTATTACGCGCCGGTCCACCGCGCGCTCTGCGAGCCCATCCTGCTCGGCGGCGCG
CCACGGAGCCTCGCCATCGT

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKAKKTRLLAGTALDRLGVLAVTSAGLLITAPAHAGGSSMPWEAPLQSILESIEGPVAKIVAVIIIIVTGLSLAFGDTSG
GFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV

Sequences:

>Translated_114_residues
MKAKKTRLLAGTALDRLGVLAVTSAGLLITAPAHAGGSSMPWEAPLQSILESIEGPVAKIVAVIIIIVTGLSLAFGDTSG
GFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
>Mature_114_residues
MKAKKTRLLAGTALDRLGVLAVTSAGLLITAPAHAGGSSMPWEAPLQSILESIEGPVAKIVAVIIIIVTGLSLAFGDTSG
GFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11651; Mature: 11651

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKKTRLLAGTALDRLGVLAVTSAGLLITAPAHAGGSSMPWEAPLQSILESIEGPVAKI
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VAVIIIIVTGLSLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKAKKTRLLAGTALDRLGVLAVTSAGLLITAPAHAGGSSMPWEAPLQSILESIEGPVAKI
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VAVIIIIVTGLSLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA