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The map label for this gene is trbI [H]

Identifier: 103488083

GI number: 103488083

Start: 2746924

End: 2748216

Strand: Reverse

Name: trbI [H]

Synonym: Sala_2605

Alternate gene names: 103488083

Gene position: 2748216-2746924 (Counterclockwise)

Preceding gene: 103488084

Following gene: 103488082

Centisome position: 82.15

GC content: 67.21

Gene sequence:

>1293_bases
ATGAGCGGGCCGGGAGGAGAAAGGGCTGAAGCTGGGGAGCCGGTCATCGGCCTGCCGCAGAATCCCGCAGCCAGGCCGAA
TGCCGGGGAGGAACCGGAAGCGGCGCCAACTGCCGCTCCGCCGCCCGTCCATGACGGGCAGGCATTCCGGTTGCGCGGCG
ATCCGCCGTCCGTCATGCGCCTTTCGCGCAAGGCGCTTGCCTCTGTCGGTGCGGTTGCCTGCCTCAGCATCGGCGGCGCG
CTCGTTTATGCGCTTCTGCCCGCGCGTCATGCCGACGCACCGAATCTCGTTGAAACCGAGAGCCGGAACAAGGCGGACAA
TGTGACTGCGGCGCCGGCCAGCTACGACAAGGTTCCCAAGCTCGGTCAGCCGCTCCCGGGCGACCTCGGACGCCCGATCC
TCTCGGCGCAGCAAAATGGTCAGCCCGTTGCCGTGCCGCCGATGGGGACGCCGGCTCCTCAATCCGTGGACCCGCGCGTC
GCTGCAGCGGACCAGGCCCGCCAGCGCATCATGCAGGAGCGCGACACCGCGCGCACTAGCGGGTTGTTCCTCGGCGAGGC
AATGAGCGGCGCGCGCGCTTCGGCGGCGTCTGCCGAGCAGGCTATGCCGCCCGCTTCAGTTGGCATTGCGGCCAATCCGG
CTCCCGCGCCGACTGGCAAGCGCGGCTTTATGGCCGTCGTTGCCGACCGCTCCACCGCCAGCAATGAACGGGTCGCTCCG
CCGGTCTCACCTTATATCGTGCAGGCCGGCAGCATCATCCCGGCCGCGTTGATCACGGGCATCCAGTCGGATCTCCCTGG
CCAGATCACCGCGCAGGTCACGCAGAATGTCTATGACAGCCCGACGGGACGCATTCTTCTCGTGCCCCAGGGCTCGCGGC
TGATCGGCGAATATGACAGCGAAGTCTCGGCGGGCCAAAGCCGAGTGCTGCTCGCCTGGGATCGGCTTATTCTTCCAGGT
GGCCGCTCGATCCTGCTGGACCGCCAGCCAGGTGCCGACGCGTCCGGTATGGCAGGGATCCGGGATCGCGTGAACTATCA
TTGGGGCAGCATGCTCAAAGCCGCGCTGGTCTCGACGTTGCTGGGCGTCGGCACCGAGCTTGCAACCGACAGCGACGACG
CGCTGGTCGAGGCTTTGCGCTACGGCACGCAGGACACGATCAATCAAACGGGACGCCAGGTCGTGCAGCGCCAGCTCAGC
GTCCCACCGACGCTCACCATACGCCCAGGCCATGTGCTTCGCGTCATCGTGACGCGCGATCTCGTACTCGAGCCGCTACG
GAAGGAACAGTGA

Upstream 100 bases:

>100_bases
TCGACCGGCTCTTTTCCCGTGCCGAACTGCGGCTTGCGTCCGGCAAACGCGAGGCGAGGGTCAGCATCGAGCGCGAAAGC
CCGCGCCGCAAGGGCCGGTC

Downstream 100 bases:

>100_bases
TGAGCAAGCTGAAACTGGGTCCGATCGACGATGACAAGCCGGTCAAGCTGACATTGGAACTGCCGGCGCCCGTCCACCGC
GATCTCATTGCCTATGCCAG

Product: conjugation TrbI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSGPGGERAEAGEPVIGLPQNPAARPNAGEEPEAAPTAAPPPVHDGQAFRLRGDPPSVMRLSRKALASVGAVACLSIGGA
LVYALLPARHADAPNLVETESRNKADNVTAAPASYDKVPKLGQPLPGDLGRPILSAQQNGQPVAVPPMGTPAPQSVDPRV
AAADQARQRIMQERDTARTSGLFLGEAMSGARASAASAEQAMPPASVGIAANPAPAPTGKRGFMAVVADRSTASNERVAP
PVSPYIVQAGSIIPAALITGIQSDLPGQITAQVTQNVYDSPTGRILLVPQGSRLIGEYDSEVSAGQSRVLLAWDRLILPG
GRSILLDRQPGADASGMAGIRDRVNYHWGSMLKAALVSTLLGVGTELATDSDDALVEALRYGTQDTINQTGRQVVQRQLS
VPPTLTIRPGHVLRVIVTRDLVLEPLRKEQ

Sequences:

>Translated_430_residues
MSGPGGERAEAGEPVIGLPQNPAARPNAGEEPEAAPTAAPPPVHDGQAFRLRGDPPSVMRLSRKALASVGAVACLSIGGA
LVYALLPARHADAPNLVETESRNKADNVTAAPASYDKVPKLGQPLPGDLGRPILSAQQNGQPVAVPPMGTPAPQSVDPRV
AAADQARQRIMQERDTARTSGLFLGEAMSGARASAASAEQAMPPASVGIAANPAPAPTGKRGFMAVVADRSTASNERVAP
PVSPYIVQAGSIIPAALITGIQSDLPGQITAQVTQNVYDSPTGRILLVPQGSRLIGEYDSEVSAGQSRVLLAWDRLILPG
GRSILLDRQPGADASGMAGIRDRVNYHWGSMLKAALVSTLLGVGTELATDSDDALVEALRYGTQDTINQTGRQVVQRQLS
VPPTLTIRPGHVLRVIVTRDLVLEPLRKEQ
>Mature_429_residues
SGPGGERAEAGEPVIGLPQNPAARPNAGEEPEAAPTAAPPPVHDGQAFRLRGDPPSVMRLSRKALASVGAVACLSIGGAL
VYALLPARHADAPNLVETESRNKADNVTAAPASYDKVPKLGQPLPGDLGRPILSAQQNGQPVAVPPMGTPAPQSVDPRVA
AADQARQRIMQERDTARTSGLFLGEAMSGARASAASAEQAMPPASVGIAANPAPAPTGKRGFMAVVADRSTASNERVAPP
VSPYIVQAGSIIPAALITGIQSDLPGQITAQVTQNVYDSPTGRILLVPQGSRLIGEYDSEVSAGQSRVLLAWDRLILPGG
RSILLDRQPGADASGMAGIRDRVNYHWGSMLKAALVSTLLGVGTELATDSDDALVEALRYGTQDTINQTGRQVVQRQLSV
PPTLTIRPGHVLRVIVTRDLVLEPLRKEQ

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 44735; Mature: 44604

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPGGERAEAGEPVIGLPQNPAARPNAGEEPEAAPTAAPPPVHDGQAFRLRGDPPSVMR
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
LSRKALASVGAVACLSIGGALVYALLPARHADAPNLVETESRNKADNVTAAPASYDKVPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCC
LGQPLPGDLGRPILSAQQNGQPVAVPPMGTPAPQSVDPRVAAADQARQRIMQERDTARTS
CCCCCCCHHCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GLFLGEAMSGARASAASAEQAMPPASVGIAANPAPAPTGKRGFMAVVADRSTASNERVAP
CEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
PVSPYIVQAGSIIPAALITGIQSDLPGQITAQVTQNVYDSPTGRILLVPQGSRLIGEYDS
CCCHHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCC
EVSAGQSRVLLAWDRLILPGGRSILLDRQPGADASGMAGIRDRVNYHWGSMLKAALVSTL
HHHCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGVGTELATDSDDALVEALRYGTQDTINQTGRQVVQRQLSVPPTLTIRPGHVLRVIVTRD
HHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHH
LVLEPLRKEQ
HHHHHHHCCC
>Mature Secondary Structure 
SGPGGERAEAGEPVIGLPQNPAARPNAGEEPEAAPTAAPPPVHDGQAFRLRGDPPSVMR
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
LSRKALASVGAVACLSIGGALVYALLPARHADAPNLVETESRNKADNVTAAPASYDKVPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCC
LGQPLPGDLGRPILSAQQNGQPVAVPPMGTPAPQSVDPRVAAADQARQRIMQERDTARTS
CCCCCCCHHCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GLFLGEAMSGARASAASAEQAMPPASVGIAANPAPAPTGKRGFMAVVADRSTASNERVAP
CEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
PVSPYIVQAGSIIPAALITGIQSDLPGQITAQVTQNVYDSPTGRILLVPQGSRLIGEYDS
CCCHHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCC
EVSAGQSRVLLAWDRLILPGGRSILLDRQPGADASGMAGIRDRVNYHWGSMLKAALVSTL
HHHCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGVGTELATDSDDALVEALRYGTQDTINQTGRQVVQRQLSVPPTLTIRPGHVLRVIVTRD
HHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEHHH
LVLEPLRKEQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]