| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488018
Identifier: 103488018
GI number: 103488018
Start: 2679889
End: 2680428
Strand: Reverse
Name: 103488018
Synonym: Sala_2540
Alternate gene names: NA
Gene position: 2680428-2679889 (Counterclockwise)
Preceding gene: 103488019
Following gene: 103488017
Centisome position: 80.13
GC content: 63.33
Gene sequence:
>540_bases ATGACCGAGGAACGCCTCTTGAACGTGCTGTTCCTCTGCACGGGCAATTCGGCGCGCTCGATTATTGCCGAGGCGATCCT GAACCGCGAAGGCCGTGGGCGTTTCCGCGCGTTCAGCGCCGGCAGCCAGCCCAAGGGCGAGGTTCATCCCTTCACCCTGC ATCTGCTCGAAAGGCTCAACCACGACACGAGCCAGTTCCGCTCAAAGAGCTGGAACGAGTTTGCCGGGCCGGATGCGCCG CCGCTCGATTTCGTGTTCACCGTCTGCGACAATGCCGCGAACGAGACCTGCCCGGTGTGGCCGGGACAGCCCATTACCGC CAACTGGGGCGTACCCGATCCGGCCGTGATCGAGGATGACGAAGCCGTTCAGCACGCGGCGTTCTTCGATACCTACCGGA TGCTGTTCAACCGCATCTCGTTGTTCACCAACCTGCCGTTCGAAGGGCTCGACCGGATGAGCCTGCAGACCCGGCTCAAG GCGATCGGCAAGGACCAGGCGCGCGCCAGCATCGACACCAATACGGAGCCTTCCGCGTGA
Upstream 100 bases:
>100_bases TCGAATATCTGATGGAGGATTGCTGCAACGGCGCGCCGGAAATCTGCGCGCCGCTCGCGGATGTGGCACTCAAGAGCCGC TGTGGAAAGGAAGGACGCGC
Downstream 100 bases:
>100_bases CTTCTGACATCATCATCTATCACAATCCCGAGTGCGGCACCTCGCGCAACACGCTGGCAATGATCCGCAACGCCGGCATC GAGCCGCATGTCGTCGAGTA
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Arsenate Reductase; Protein-Tyrosine Phosphatase Low Molecular Weight; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Transcriptional Regulator ArsR Family; ArsR Family Transcriptional Regulator; Protein-Tyrosine-Phosphatase; Transcriptional Regulator/Arsenate Reductase; Transcriptional Regulator; Protein ArsC; Arsenate Reductase ArsC; Phosphatase; Protein-Tyrosine-Phosphatase Protein; Transcriptional Regulator ArsR Family Protein; Tyrosine Phosphatase; Arsenate Reductase Subunit ArsC; Arsenate Reductase / Phosphotyrosine Protein Phosphatase; ArsR Family Transcriptional Regulator Tyrosine Phosphatase; Arsenate Reductase Gene ARSC; Protein-Tyrosine Phosphatase
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTEERLLNVLFLCTGNSARSIIAEAILNREGRGRFRAFSAGSQPKGEVHPFTLHLLERLNHDTSQFRSKSWNEFAGPDAP PLDFVFTVCDNAANETCPVWPGQPITANWGVPDPAVIEDDEAVQHAAFFDTYRMLFNRISLFTNLPFEGLDRMSLQTRLK AIGKDQARASIDTNTEPSA
Sequences:
>Translated_179_residues MTEERLLNVLFLCTGNSARSIIAEAILNREGRGRFRAFSAGSQPKGEVHPFTLHLLERLNHDTSQFRSKSWNEFAGPDAP PLDFVFTVCDNAANETCPVWPGQPITANWGVPDPAVIEDDEAVQHAAFFDTYRMLFNRISLFTNLPFEGLDRMSLQTRLK AIGKDQARASIDTNTEPSA >Mature_178_residues TEERLLNVLFLCTGNSARSIIAEAILNREGRGRFRAFSAGSQPKGEVHPFTLHLLERLNHDTSQFRSKSWNEFAGPDAPP LDFVFTVCDNAANETCPVWPGQPITANWGVPDPAVIEDDEAVQHAAFFDTYRMLFNRISLFTNLPFEGLDRMSLQTRLKA IGKDQARASIDTNTEPSA
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19983; Mature: 19851
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEERLLNVLFLCTGNSARSIIAEAILNREGRGRFRAFSAGSQPKGEVHPFTLHLLERLN CCHHHHEEEHEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHC HDTSQFRSKSWNEFAGPDAPPLDFVFTVCDNAANETCPVWPGQPITANWGVPDPAVIEDD CCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEECCH EAVQHAAFFDTYRMLFNRISLFTNLPFEGLDRMSLQTRLKAIGKDQARASIDTNTEPSA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC >Mature Secondary Structure TEERLLNVLFLCTGNSARSIIAEAILNREGRGRFRAFSAGSQPKGEVHPFTLHLLERLN CHHHHEEEHEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHC HDTSQFRSKSWNEFAGPDAPPLDFVFTVCDNAANETCPVWPGQPITANWGVPDPAVIEDD CCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEECCH EAVQHAAFFDTYRMLFNRISLFTNLPFEGLDRMSLQTRLKAIGKDQARASIDTNTEPSA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA