| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is qor [H]
Identifier: 103487613
GI number: 103487613
Start: 2236825
End: 2237820
Strand: Direct
Name: qor [H]
Synonym: Sala_2132
Alternate gene names: 103487613
Gene position: 2236825-2237820 (Clockwise)
Preceding gene: 103487612
Following gene: 103487614
Centisome position: 66.87
GC content: 66.67
Gene sequence:
>996_bases ATGAAGGCTCTTTTGTCGACCGCAACCGGCGGCCCCGAAACGCTGGTCCTTGGCGAACTGCCGCGCCCGAGCGCGGGCAA GGGCCAGATCGTGATCGACGTGAAAGCCTGCGCGGTCAATTTCCCCGACACGCTCATCATCGAGGATAAATATCAGTTCA AACCCGAACGCCCCTTTGCGCCTGGCGGCGAAGTGGCCGGGCTGGTCGCCGAAGTCGGCGAGGGCGTCACCGGGTTCAAG GCCGGCGACCGGGTGATCGCGGGCTGCGGCAACGGGGGAATGGCCGAGGCGGTCGCGGTCTCGGTGCATAATGTCTATCA CCTGCCCGAAGGCCATGACTTTGCCGAAGGTGCCTCCTTGCTGATGACCTATGGCACCAGCATCCACGCGCTCGTTGATC GCGGGCACATCAAGGAAGGCGACACGCTGCTGGTCCTGGGCGCATCGGGCGGGGTCGGCATCGCCGCAGTCGAGCTGGGC AAGGCGTTCGGGGCGCGCGTCGTCGCGGGCGTGTCGAGCGAGGAGAAGGCCGCGATCGCGCGCGACGCGGGCGCCGACGA GATCGTGGTCTATGGCCGCCAGCCGTTCGACAAGGACCAGTCGAAGGAACTTGCGAACCGATTCAAGGAAGCCGTCGGGC CGGGCGGCGCGAACCTCATCTATGACGCAGTCGGCGGCGATTATGCCGAGCCGGCGCTGCGTTCGATCGCGTGGGAGGGC CGCTATCTGGTCGTCGGCTTCCCCGCGGGCATCCCGCGCCTGCCGCTGAACCTGACGCTGCTCAAGAGCTGCGACGTTGC CGGCGTCTTCTGGGGCGCGTTCGTCGCACGCGAACCGGAACGCAACCGCGCCAATATCGCGCGCCTGTTCCAGCTGTGGG AGCAAGGCAAGATCAAGCCGCGCGTCACCGGCAGCTATGCCCTTGAAGACGGAGGCAAGGCGATCGCCAAGCTCGGCGAT CGCAGCGCGGTGGGCAAGCTGGTCGTCACCATCTGA
Upstream 100 bases:
>100_bases AGAGCGATGCGGCGATCGGCGCCTATGAAGACAGGCTCGATGCCGAGCGTCCGTGGATGCGCGCCGTCGTCGGGTAGGAC ACCGAAGAGGAGAAGATGTG
Downstream 100 bases:
>100_bases AATACCGCCCCGATCCCGCGCTGACCGCGGCGCTCCGGGCCCTCGCCGCCGACGGGCGGATCGAGGTGCGGATGACGCCC GGCGCGCGCAGCGAGGCGGT
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKALLSTATGGPETLVLGELPRPSAGKGQIVIDVKACAVNFPDTLIIEDKYQFKPERPFAPGGEVAGLVAEVGEGVTGFK AGDRVIAGCGNGGMAEAVAVSVHNVYHLPEGHDFAEGASLLMTYGTSIHALVDRGHIKEGDTLLVLGASGGVGIAAVELG KAFGARVVAGVSSEEKAAIARDAGADEIVVYGRQPFDKDQSKELANRFKEAVGPGGANLIYDAVGGDYAEPALRSIAWEG RYLVVGFPAGIPRLPLNLTLLKSCDVAGVFWGAFVAREPERNRANIARLFQLWEQGKIKPRVTGSYALEDGGKAIAKLGD RSAVGKLVVTI
Sequences:
>Translated_331_residues MKALLSTATGGPETLVLGELPRPSAGKGQIVIDVKACAVNFPDTLIIEDKYQFKPERPFAPGGEVAGLVAEVGEGVTGFK AGDRVIAGCGNGGMAEAVAVSVHNVYHLPEGHDFAEGASLLMTYGTSIHALVDRGHIKEGDTLLVLGASGGVGIAAVELG KAFGARVVAGVSSEEKAAIARDAGADEIVVYGRQPFDKDQSKELANRFKEAVGPGGANLIYDAVGGDYAEPALRSIAWEG RYLVVGFPAGIPRLPLNLTLLKSCDVAGVFWGAFVAREPERNRANIARLFQLWEQGKIKPRVTGSYALEDGGKAIAKLGD RSAVGKLVVTI >Mature_331_residues MKALLSTATGGPETLVLGELPRPSAGKGQIVIDVKACAVNFPDTLIIEDKYQFKPERPFAPGGEVAGLVAEVGEGVTGFK AGDRVIAGCGNGGMAEAVAVSVHNVYHLPEGHDFAEGASLLMTYGTSIHALVDRGHIKEGDTLLVLGASGGVGIAAVELG KAFGARVVAGVSSEEKAAIARDAGADEIVVYGRQPFDKDQSKELANRFKEAVGPGGANLIYDAVGGDYAEPALRSIAWEG RYLVVGFPAGIPRLPLNLTLLKSCDVAGVFWGAFVAREPERNRANIARLFQLWEQGKIKPRVTGSYALEDGGKAIAKLGD RSAVGKLVVTI
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=334, Percent_Identity=32.0359281437126, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI13236495, Length=334, Percent_Identity=32.0359281437126, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI194239676, Length=216, Percent_Identity=36.5740740740741, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI18379349, Length=322, Percent_Identity=27.9503105590062, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI24308257, Length=359, Percent_Identity=26.7409470752089, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI22538446, Length=251, Percent_Identity=31.0756972111554, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI22538444, Length=251, Percent_Identity=31.0756972111554, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI28557745, Length=291, Percent_Identity=26.1168384879725, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI41872631, Length=263, Percent_Identity=28.1368821292776, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI47519420, Length=301, Percent_Identity=29.2358803986711, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI67078404, Length=324, Percent_Identity=24.6913580246914, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI67078406, Length=288, Percent_Identity=25.3472222222222, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1790485, Length=328, Percent_Identity=30.7926829268293, Blast_Score=106, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17507255, Length=333, Percent_Identity=29.7297297297297, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17536829, Length=307, Percent_Identity=26.3843648208469, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=339, Percent_Identity=28.9085545722714, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6324486, Length=313, Percent_Identity=23.0031948881789, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323729, Length=312, Percent_Identity=23.0769230769231, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI19920632, Length=260, Percent_Identity=23.0769230769231, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI221330659, Length=260, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI45550423, Length=312, Percent_Identity=27.2435897435897, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24581345, Length=260, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34519; Mature: 34519
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLSTATGGPETLVLGELPRPSAGKGQIVIDVKACAVNFPDTLIIEDKYQFKPERPFA CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCC PGGEVAGLVAEVGEGVTGFKAGDRVIAGCGNGGMAEAVAVSVHNVYHLPEGHDFAEGASL CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHEEEEEEEEEECCCCCCHHHHHHE LMTYGTSIHALVDRGHIKEGDTLLVLGASGGVGIAAVELGKAFGARVVAGVSSEEKAAIA EEECCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCEEEECCCCCHHHHHH RDAGADEIVVYGRQPFDKDQSKELANRFKEAVGPGGANLIYDAVGGDYAEPALRSIAWEG HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCC RYLVVGFPAGIPRLPLNLTLLKSCDVAGVFWGAFVAREPERNRANIARLFQLWEQGKIKP CEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE RVTGSYALEDGGKAIAKLGDRSAVGKLVVTI EECCCEEECCCCHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure MKALLSTATGGPETLVLGELPRPSAGKGQIVIDVKACAVNFPDTLIIEDKYQFKPERPFA CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCC PGGEVAGLVAEVGEGVTGFKAGDRVIAGCGNGGMAEAVAVSVHNVYHLPEGHDFAEGASL CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHEEEEEEEEEECCCCCCHHHHHHE LMTYGTSIHALVDRGHIKEGDTLLVLGASGGVGIAAVELGKAFGARVVAGVSSEEKAAIA EEECCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHHCCEEEECCCCCHHHHHH RDAGADEIVVYGRQPFDKDQSKELANRFKEAVGPGGANLIYDAVGGDYAEPALRSIAWEG HCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCC RYLVVGFPAGIPRLPLNLTLLKSCDVAGVFWGAFVAREPERNRANIARLFQLWEQGKIKP CEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE RVTGSYALEDGGKAIAKLGDRSAVGKLVVTI EECCCEEECCCCHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]