| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487585
Identifier: 103487585
GI number: 103487585
Start: 2210824
End: 2211513
Strand: Direct
Name: 103487585
Synonym: Sala_2104
Alternate gene names: NA
Gene position: 2210824-2211513 (Clockwise)
Preceding gene: 103487584
Following gene: 103487586
Centisome position: 66.09
GC content: 70.72
Gene sequence:
>690_bases GTGAAGCGCTTCTGGAAAGAGGTGACCGTCGTCGCCGAGGGCGTCGGCTGGAGCATCGCGCTCGACGGGCGGCCGGTGCG CACGCCGCAGCGCGCGACGCTGATGGTTGCGAGCGCGGCACTGGCCGAAGCGATCGCGGCCGAATGGGACGACGTCGGCG AAACGATCGATCCCGCCGCGATGCCGATGACGGGACTGGCCAACGCCGCGATCGACCTCGCCGCGCCCGACCTCACCGCC TTTGCCGCGCCGATCGCGGCCTATGCGACGAGCGACCTTCTCTGCTACCGCGACGCGCGCGACGCGACGTTGCAGGCCGA ACAGGCGGCGGCGTGGAACCCGCTGCTCGCCTGGGCCGAGGAACGCTACGGCGTCGAGTTCGCGCTGACACAGGGCGTGA TTCCGGTCGACCAGCCCGCCGCAACCGTCGCGGCGCTGCGGGATGCCGCGTTCGCGCAGGACCAGTGGCGGATCACGGCG CTGACTCCGCTGGTGACGATCGGCGGTTCGCTCGTCGCGGGGCTGGCGCTCATCGAAAACGCCTTCGACGCCGACGCCTT GTGGCAGGCGGTCAGCCTCGATGAGCTGTATCAGGAACGCCGCTGGGGCGCCGACGGCGAAGCACAGAAAGCGCGCGCGG CGAAGCAGCGCGACTGGGACAATGCGGCCCGGTTCCTGGGTCTGCTTTAG
Upstream 100 bases:
>100_bases CCGACCGCTGGATCGGGGTTGCGATCGTGCTGATCGGCGCGTTCGATTTTGCGGTGATGCCGCTGCTGCTCGCACGCCGC TGGCGCTCGCCCAGAGACCT
Downstream 100 bases:
>100_bases CAGGCTGCGGAAAAACTGTTCCCGTTCGGGGCTCGGCGTGATTCAATGGCGGCGTTGAGCTGGGGGGGGGGGCAGCATGC GGGGGGACGACATTGGGACG
Product: ATP12 ATPase
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAAMPMTGLANAAIDLAAPDLTA FAAPIAAYATSDLLCYRDARDATLQAEQAAAWNPLLAWAEERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITA LTPLVTIGGSLVAGLALIENAFDADALWQAVSLDELYQERRWGADGEAQKARAAKQRDWDNAARFLGLL
Sequences:
>Translated_229_residues MKRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAAMPMTGLANAAIDLAAPDLTA FAAPIAAYATSDLLCYRDARDATLQAEQAAAWNPLLAWAEERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITA LTPLVTIGGSLVAGLALIENAFDADALWQAVSLDELYQERRWGADGEAQKARAAKQRDWDNAARFLGLL >Mature_229_residues MKRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAAMPMTGLANAAIDLAAPDLTA FAAPIAAYATSDLLCYRDARDATLQAEQAAAWNPLLAWAEERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITA LTPLVTIGGSLVAGLALIENAFDADALWQAVSLDELYQERRWGADGEAQKARAAKQRDWDNAARFLGLL
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=220, Percent_Identity=31.8181818181818, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24585626, Length=209, Percent_Identity=28.7081339712919, Blast_Score=85, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24525; Mature: 24525
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAA CCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MPMTGLANAAIDLAAPDLTAFAAPIAAYATSDLLCYRDARDATLQAEQAAAWNPLLAWAE CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHHH ERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITALTPLVTIGGSLVAGLALIEN HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH AFDADALWQAVSLDELYQERRWGADGEAQKARAAKQRDWDNAARFLGLL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MKRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAA CCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MPMTGLANAAIDLAAPDLTAFAAPIAAYATSDLLCYRDARDATLQAEQAAAWNPLLAWAE CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHHH ERYGVEFALTQGVIPVDQPAATVAALRDAAFAQDQWRITALTPLVTIGGSLVAGLALIEN HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH AFDADALWQAVSLDELYQERRWGADGEAQKARAAKQRDWDNAARFLGLL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA