| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487584
Identifier: 103487584
GI number: 103487584
Start: 2210591
End: 2210827
Strand: Direct
Name: 103487584
Synonym: Sala_2103
Alternate gene names: NA
Gene position: 2210591-2210827 (Clockwise)
Preceding gene: 103487583
Following gene: 103487585
Centisome position: 66.08
GC content: 64.98
Gene sequence:
>237_bases ATGACCCCGGCCGACGACACACTCGCCAAGAAGCGCTTTTTCGCGATGACGATCATGCGCCTGATGGGCGTCGCCTTCAT CGCGATCGGCTTCATCCTCATCAGCGGCGGATTTGCGCTGGCGGGCCAGCCGACCGACCGCTGGATCGGGGTTGCGATCG TGCTGATCGGCGCGTTCGATTTTGCGGTGATGCCGCTGCTGCTCGCACGCCGCTGGCGCTCGCCCAGAGACCTGTGA
Upstream 100 bases:
>100_bases CCGACGGGACGCAAGCCCGCCGCGAAAAAGCCGTCGGCGCACCCCACGCGACCGCGCTCGCACAGTTGATGCGCCACCTC GGCGGCGATAGGGAGGGCGC
Downstream 100 bases:
>100_bases AGCGCTTCTGGAAAGAGGTGACCGTCGTCGCCGAGGGCGTCGGCTGGAGCATCGCGCTCGACGGGCGGCCGGTGCGCACG CCGCAGCGCGCGACGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTPADDTLAKKRFFAMTIMRLMGVAFIAIGFILISGGFALAGQPTDRWIGVAIVLIGAFDFAVMPLLLARRWRSPRDL
Sequences:
>Translated_78_residues MTPADDTLAKKRFFAMTIMRLMGVAFIAIGFILISGGFALAGQPTDRWIGVAIVLIGAFDFAVMPLLLARRWRSPRDL >Mature_77_residues TPADDTLAKKRFFAMTIMRLMGVAFIAIGFILISGGFALAGQPTDRWIGVAIVLIGAFDFAVMPLLLARRWRSPRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8599; Mature: 8467
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPADDTLAKKRFFAMTIMRLMGVAFIAIGFILISGGFALAGQPTDRWIGVAIVLIGAFD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FAVMPLLLARRWRSPRDL HHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPADDTLAKKRFFAMTIMRLMGVAFIAIGFILISGGFALAGQPTDRWIGVAIVLIGAFD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FAVMPLLLARRWRSPRDL HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA