| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487567
Identifier: 103487567
GI number: 103487567
Start: 2192298
End: 2192606
Strand: Direct
Name: 103487567
Synonym: Sala_2086
Alternate gene names: NA
Gene position: 2192298-2192606 (Clockwise)
Preceding gene: 103487566
Following gene: 103487568
Centisome position: 65.54
GC content: 66.67
Gene sequence:
>309_bases GTGCGGCGCGCCGAAAGCGGGCTGGTGGATGCCGACCTCGGCGGCGGTGTCATCAAGCAGCGCGTGGCGCGACCGGGCAA GGGCAGGTCGGGCGGCTATCGCACACTGATCCTGTTCCGGCGGGGCGATCGCGCGATATTCGCCTTTGGCTTCGCCAAGA GCGCGCAGGCGAACATATCGAAGGCGGATCTGGCGCTGCTGCGTGATGCGGCGGCCGAGGCGCTGGAATGGAGCGGCGCG CAACTGGACCGGCTGGTAGCGTCGGAAACGCTGGTGGAGATTGAAAATGACACGGACGGCCAAGGATAA
Upstream 100 bases:
>100_bases GCGACGCGGGAGAACCGCCATCACGCGCATCTTCAAAAATGGCTGGTTCGAGCGCTTCGCGCGCAAGGAAAGGATCGATG ACGCGGCGCTACGGGATGCG
Downstream 100 bases:
>100_bases GGGCTATCGCAGCGAGATCGCGGGCGCGATCCATGAGATGATCAGCGACGCGCATGACGCGGGCGTCGTGTCGCGCACGA CTTTGCGCAGCTTTGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRRAESGLVDADLGGGVIKQRVARPGKGRSGGYRTLILFRRGDRAIFAFGFAKSAQANISKADLALLRDAAAEALEWSGA QLDRLVASETLVEIENDTDGQG
Sequences:
>Translated_102_residues MRRAESGLVDADLGGGVIKQRVARPGKGRSGGYRTLILFRRGDRAIFAFGFAKSAQANISKADLALLRDAAAEALEWSGA QLDRLVASETLVEIENDTDGQG >Mature_102_residues MRRAESGLVDADLGGGVIKQRVARPGKGRSGGYRTLILFRRGDRAIFAFGFAKSAQANISKADLALLRDAAAEALEWSGA QLDRLVASETLVEIENDTDGQG
Specific function: Unknown
COG id: COG4737
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10862; Mature: 10862
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAESGLVDADLGGGVIKQRVARPGKGRSGGYRTLILFRRGDRAIFAFGFAKSAQANIS CCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCC KADLALLRDAAAEALEWSGAQLDRLVASETLVEIENDTDGQG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCCC >Mature Secondary Structure MRRAESGLVDADLGGGVIKQRVARPGKGRSGGYRTLILFRRGDRAIFAFGFAKSAQANIS CCCCCCCCEECCCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCC KADLALLRDAAAEALEWSGAQLDRLVASETLVEIENDTDGQG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA