| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487556
Identifier: 103487556
GI number: 103487556
Start: 2181862
End: 2182350
Strand: Direct
Name: 103487556
Synonym: Sala_2075
Alternate gene names: NA
Gene position: 2181862-2182350 (Clockwise)
Preceding gene: 103487555
Following gene: 103487559
Centisome position: 65.22
GC content: 72.8
Gene sequence:
>489_bases ATGGTCGCCAACGACAATCGGCCCGGACGGCCCGGGTGGTCCGGAACCAGCGGGTCGATCCCCGACGATGCACGGGCGGT CGTCGAACCCGTCCCGCGGCCCGCGACATCGGGTCGTCGGCTTCGCGACCGCTGGCGGGTGCGCTTCGTGCCGCGATGGG GGCCTTCGATCGACCCGCTGACGGGCTGGAGCGGTGGCGGCGATCCGCTTGCCAGCGTGGAACTGCGTTTCGCCAGCCGC ACGTCCGCCGAGGCCTGTTGCCGTCGGATGGGCATCCCTTTCGAGAGCCGCGGCGCGCCGCCGGACCCGCCGCGCGCGGC GGCGCCACGTCCGTCTGGCGAAGCGACGCCGCTGTGCTGCTGGCCGACCGGTCCGCATCCGCTGTGTTGCGGACACTATC CGGTCGCGGGGCGATATGCGGCGCAGAACGACGACGGCGCGCGATACGCTTTCCGGCGCACCGCGGCATCGCTCACTGGA TCGCGATGA
Upstream 100 bases:
>100_bases GTGCGGCTGCCCCGGACGGAGGCGGCGAGGAAAAATGTTCGCCGCATCCCGATCAATGGCAAAGCCGCCTGACACGGCCG CCCGGGCCGTCCGCCCCGCG
Downstream 100 bases:
>100_bases CACCGTCGACCGCGCGCCATTCGGCCGGACGGACCAATCGCTCGTGCGCGATCCGCACCGAATGGAGCGCGGCCTCGATC TCGCGCCGCCAATGATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MVANDNRPGRPGWSGTSGSIPDDARAVVEPVPRPATSGRRLRDRWRVRFVPRWGPSIDPLTGWSGGGDPLASVELRFASR TSAEACCRRMGIPFESRGAPPDPPRAAAPRPSGEATPLCCWPTGPHPLCCGHYPVAGRYAAQNDDGARYAFRRTAASLTG SR
Sequences:
>Translated_162_residues MVANDNRPGRPGWSGTSGSIPDDARAVVEPVPRPATSGRRLRDRWRVRFVPRWGPSIDPLTGWSGGGDPLASVELRFASR TSAEACCRRMGIPFESRGAPPDPPRAAAPRPSGEATPLCCWPTGPHPLCCGHYPVAGRYAAQNDDGARYAFRRTAASLTG SR >Mature_162_residues MVANDNRPGRPGWSGTSGSIPDDARAVVEPVPRPATSGRRLRDRWRVRFVPRWGPSIDPLTGWSGGGDPLASVELRFASR TSAEACCRRMGIPFESRGAPPDPPRAAAPRPSGEATPLCCWPTGPHPLCCGHYPVAGRYAAQNDDGARYAFRRTAASLTG SR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17378; Mature: 17378
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVANDNRPGRPGWSGTSGSIPDDARAVVEPVPRPATSGRRLRDRWRVRFVPRWGPSIDPL CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCC TGWSGGGDPLASVELRFASRTSAEACCRRMGIPFESRGAPPDPPRAAAPRPSGEATPLCC CCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE WPTGPHPLCCGHYPVAGRYAAQNDDGARYAFRRTAASLTGSR ECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MVANDNRPGRPGWSGTSGSIPDDARAVVEPVPRPATSGRRLRDRWRVRFVPRWGPSIDPL CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCC TGWSGGGDPLASVELRFASRTSAEACCRRMGIPFESRGAPPDPPRAAAPRPSGEATPLCC CCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE WPTGPHPLCCGHYPVAGRYAAQNDDGARYAFRRTAASLTGSR ECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA