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The map label for this gene is hspD [H]

Identifier: 103487554

GI number: 103487554

Start: 2180741

End: 2181220

Strand: Direct

Name: hspD [H]

Synonym: Sala_2073

Alternate gene names: 103487554

Gene position: 2180741-2181220 (Clockwise)

Preceding gene: 103487553

Following gene: 103487555

Centisome position: 65.19

GC content: 61.67

Gene sequence:

>480_bases
ATGAGAAGCAACTTTGACTTTACGCCTTATCGGCGTTCCACGGTCGGCTTCGACCGTCTTTTCGACCTGCTCGAAGCCGG
AACGCGCAGCGATGCCGCCGATGGCTATCCGCCCTTCGACATCGTGCGGGAGGGTGAGGACAGCTATCGCATCACGCTTG
CGGTCGCAGGTTTTCGTCCCGACGAAATCGAGGTGATCGCGCAGCAGAACCAGCTCACCGTCACCGGCAAGCGCGCCGAG
GATGACAGCCAGGGCAAATATCTGCACCGCGGCATCGCCGCACGCGACTTCGAGCGACGCTTCCAGCTTGCCGATTTCAT
CGAGGTCGGCGAGGCGGATTTCGACAATGGCCTGCTTTCGATCGAGCTGAAGCGCGTCGTCCCCGAAGCGATGAAGCCCC
GCAAGATCGCGATCGGCAACGGCAAAGCCGCATCCGAACGCATCGAATCACGCCGGGACAAGGCGCTCGAATCCGCCTGA

Upstream 100 bases:

>100_bases
TTGCCGGATGCCAGTCCGGGTCCGGTGGACATGGAGAGCGTCGGCTCTTCCTTACCGGCGCATCTCATGCCCGAATTGCT
TCGCAAAGGAGGATTTGGAG

Downstream 100 bases:

>100_bases
CCGATGCGAAAAAGCCGAAACGCCGTCCGGCACCGCCGCGCAAGGCGGGCCGGTCGGCCACCTTGTTCCAGTGCCTAAGG
AGATGATCATCATGTCACTT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRSNFDFTPYRRSTVGFDRLFDLLEAGTRSDAADGYPPFDIVREGEDSYRITLAVAGFRPDEIEVIAQQNQLTVTGKRAE
DDSQGKYLHRGIAARDFERRFQLADFIEVGEADFDNGLLSIELKRVVPEAMKPRKIAIGNGKAASERIESRRDKALESA

Sequences:

>Translated_159_residues
MRSNFDFTPYRRSTVGFDRLFDLLEAGTRSDAADGYPPFDIVREGEDSYRITLAVAGFRPDEIEVIAQQNQLTVTGKRAE
DDSQGKYLHRGIAARDFERRFQLADFIEVGEADFDNGLLSIELKRVVPEAMKPRKIAIGNGKAASERIESRRDKALESA
>Mature_159_residues
MRSNFDFTPYRRSTVGFDRLFDLLEAGTRSDAADGYPPFDIVREGEDSYRITLAVAGFRPDEIEVIAQQNQLTVTGKRAE
DDSQGKYLHRGIAARDFERRFQLADFIEVGEADFDNGLLSIELKRVVPEAMKPRKIAIGNGKAASERIESRRDKALESA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=136, Percent_Identity=50.7352941176471, Blast_Score=141, Evalue=2e-35,
Organism=Escherichia coli, GI87082316, Length=135, Percent_Identity=38.5185185185185, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17917; Mature: 17917

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNFDFTPYRRSTVGFDRLFDLLEAGTRSDAADGYPPFDIVREGEDSYRITLAVAGFRP
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCC
DEIEVIAQQNQLTVTGKRAEDDSQGKYLHRGIAARDFERRFQLADFIEVGEADFDNGLLS
CCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IELKRVVPEAMKPRKIAIGNGKAASERIESRRDKALESA
EEHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSNFDFTPYRRSTVGFDRLFDLLEAGTRSDAADGYPPFDIVREGEDSYRITLAVAGFRP
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHEECCCCCEEEEEEEECCCC
DEIEVIAQQNQLTVTGKRAEDDSQGKYLHRGIAARDFERRFQLADFIEVGEADFDNGLLS
CCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IELKRVVPEAMKPRKIAIGNGKAASERIESRRDKALESA
EEHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]