Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is plsC [H]
Identifier: 103487546
GI number: 103487546
Start: 2175323
End: 2176108
Strand: Reverse
Name: plsC [H]
Synonym: Sala_2065
Alternate gene names: 103487546
Gene position: 2176108-2175323 (Counterclockwise)
Preceding gene: 103487547
Following gene: 103487545
Centisome position: 65.05
GC content: 68.7
Gene sequence:
>786_bases GTGTCGCCATCGATCGCAAGCGCGACTGATCGCCCATCGATCACCTGGCGGATGTCTTTCCGCCTGGCGCTGATGGTGCT GACGCTGCTGTTCCTGATCGTCCCGCATCTCCTCTATCGCGCCATCGGGCGTCCGTCGCCGATGGTCATGGCCTTTCTCA ACGCCGCCGGCTGGATCGCCGGGCTGCGCATTCGCACCACGGGGACGCGGCTCCGCCGCGACGTGCTGTTCGTGTCGAAC CATGTCAGCTGGCTCGACATATTGGCGCTGGGGGGGGCGGCGCGTTCGGCCTTCGTGTCGAAGGCGGAGGTCGGCACGAC GCCGCTCGTCGGCTGGCTCGCCGACCAGAATCACACCGTCTATGTCCAGCGCGACGCGCGGCGCGAGATCCACAACCAGG CCAACGACCTGCGCAACGCGCTCGCGCGCGGGCGGCCGGTGACGCTGTTTCCCGAAGGGACGACCGGTCCCGGCGACGGG CTCCTTCCCTTTCGTCCCTCGCTGCTCCAGGCGGTGATCCCGACACCGCCGCGGCTGCGCGTCCAGCCGGTGTTCCTCGA CTATGGCGCCGCGGCGAGCGACATCGCCTGGCTCGATCCCGAATCGGGTCTCGACAATTTCAAGCGGCTGCTCGCGCGCA AGCGCCCGGTGCATCTGACGATCCATTATCTCGATCCGCTGCCCGATGCGGTCGAGGGCGATCGCAAGTTGCTCGCCGAG GCGGCGCGCGCCGCGATCGCGGCGGAAATCGTGCGCTCTTCCGCCGCGGCGCCGCATCGCCTATAG
Upstream 100 bases:
>100_bases AAGGTGATCGAGTTTGTCGATCCCGAACTCGAAGCGTTGCAGAAGGTGATCGCCGAACGGCTGGGCTTCCGCCTCGTCGA TCACCGCATGGAGCTTTACG
Downstream 100 bases:
>100_bases CGCGCCGATGAAATCCGACTCCCCCAAAACCTTTCACGTCAAATCCTTCGGCTGCCAGATGAACGTCTATGACGGCGAGC GCATGGCCGAGATGCTGGGC
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSPSIASATDRPSITWRMSFRLALMVLTLLFLIVPHLLYRAIGRPSPMVMAFLNAAGWIAGLRIRTTGTRLRRDVLFVSN HVSWLDILALGGAARSAFVSKAEVGTTPLVGWLADQNHTVYVQRDARREIHNQANDLRNALARGRPVTLFPEGTTGPGDG LLPFRPSLLQAVIPTPPRLRVQPVFLDYGAAASDIAWLDPESGLDNFKRLLARKRPVHLTIHYLDPLPDAVEGDRKLLAE AARAAIAAEIVRSSAAAPHRL
Sequences:
>Translated_261_residues MSPSIASATDRPSITWRMSFRLALMVLTLLFLIVPHLLYRAIGRPSPMVMAFLNAAGWIAGLRIRTTGTRLRRDVLFVSN HVSWLDILALGGAARSAFVSKAEVGTTPLVGWLADQNHTVYVQRDARREIHNQANDLRNALARGRPVTLFPEGTTGPGDG LLPFRPSLLQAVIPTPPRLRVQPVFLDYGAAASDIAWLDPESGLDNFKRLLARKRPVHLTIHYLDPLPDAVEGDRKLLAE AARAAIAAEIVRSSAAAPHRL >Mature_260_residues SPSIASATDRPSITWRMSFRLALMVLTLLFLIVPHLLYRAIGRPSPMVMAFLNAAGWIAGLRIRTTGTRLRRDVLFVSNH VSWLDILALGGAARSAFVSKAEVGTTPLVGWLADQNHTVYVQRDARREIHNQANDLRNALARGRPVTLFPEGTTGPGDGL LPFRPSLLQAVIPTPPRLRVQPVFLDYGAAASDIAWLDPESGLDNFKRLLARKRPVHLTIHYLDPLPDAVEGDRKLLAEA ARAAIAAEIVRSSAAAPHRL
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28621; Mature: 28489
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSIASATDRPSITWRMSFRLALMVLTLLFLIVPHLLYRAIGRPSPMVMAFLNAAGWIA CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GLRIRTTGTRLRRDVLFVSNHVSWLDILALGGAARSAFVSKAEVGTTPLVGWLADQNHTV EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEE YVQRDARREIHNQANDLRNALARGRPVTLFPEGTTGPGDGLLPFRPSLLQAVIPTPPRLR EEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEE VQPVFLDYGAAASDIAWLDPESGLDNFKRLLARKRPVHLTIHYLDPLPDAVEGDRKLLAE EEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH AARAAIAAEIVRSSAAAPHRL HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SPSIASATDRPSITWRMSFRLALMVLTLLFLIVPHLLYRAIGRPSPMVMAFLNAAGWIA CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GLRIRTTGTRLRRDVLFVSNHVSWLDILALGGAARSAFVSKAEVGTTPLVGWLADQNHTV EEEEEECHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEE YVQRDARREIHNQANDLRNALARGRPVTLFPEGTTGPGDGLLPFRPSLLQAVIPTPPRLR EEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEE VQPVFLDYGAAASDIAWLDPESGLDNFKRLLARKRPVHLTIHYLDPLPDAVEGDRKLLAE EEEEEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH AARAAIAAEIVRSSAAAPHRL HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]