Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is phoH [H]
Identifier: 103487544
GI number: 103487544
Start: 2172838
End: 2173845
Strand: Reverse
Name: phoH [H]
Synonym: Sala_2063
Alternate gene names: 103487544
Gene position: 2173845-2172838 (Counterclockwise)
Preceding gene: 103487545
Following gene: 103487542
Centisome position: 64.98
GC content: 67.46
Gene sequence:
>1008_bases GTGTCCAAACGCCCGCTGACCGCCGCCACCCCCGCCGAACCGGGCGATCGCGTTCGACTGACGGCCGAGTTTGAGAGGAC ACAGCTTCTGGGTATCCTGTTCGGTGAGTTCGACCGCAATCTCGTCGCGATCGAAAACCGCCTCGGCGTCTATATCTCCG CGCGCGGCAACCGCGTGCAGATCGAGGGCGAGGCCGAAGCCGCCGCCCGCGCGCGCGACGTGCTCACCGACCTCTATGAC CGCATCGAAAAGGGGCAGGAGGTCGACGCCGGCATGGTTGACGGCGTGATCGCGATGTCGGCGCAGCCGACGCTCGACGG CATCATCCGTCACGACAAGGACGAAGCCCCGCCGGTGATGATCCGCACGCGCAAAAAGACGATCGTCCCGCGCGCGCCGT CGCAAGTCCCCTATATGCAGGCGCTCGCGCGCGACGATGTGATTTTCGCGCTCGGCCCCGCAGGCACCGGCAAGACCTAT CTCGCCGTGGCGCAGGCGGTGGCGCAGCTCATCACCGGCAGCGTCCAGCGCCTGATCCTGTCGCGCCCCGCGGTCGAGGC GGGCGAAAAGCTGGGCTTCCTGCCCGGCGACATGAAGGAAAAGGTCGATCCCTATCTGCGCCCGCTCTACGACGCGCTCC ACGACTGCCTGCCCGCCGAGCAGGTCGAGCGCCGGATCGCGAGCGGGGAGATCGAGATTGCGCCGCTCGCCTTCATGCGC GGGCGCACGCTCGCCGATGCTTTCATCATCCTCGACGAGGCGCAGAATACGACGATCCCGCAGATGAAGATGTTCCTCAC CCGCTTCGGCATGAACAGCCGCATGGTGATCTGCGGCGACCCCAAGCAGGTCGACCTGCCGGTGCCCGCGACCTCGGGCC TTGCCGACGCGGTCGCACGGCTCGAAGGGCTGGAAGGCATCAACGTCAGCCGCTTCACCAGCGCCGACGTCGTCCGCCAC CCGATCGTCGGGCGCATCGTCGAAGCCTATGAGGGGCCGGGGAGCTAA
Upstream 100 bases:
>100_bases GGGATTCATTTCCGGCCGTCGAGTTTCCAAACCATCGGTGATGGACTCCCGCCTTCGCGGGAGTACACAGGTTGCTATTG ATCGAAGGAGCCTTGCCCAC
Downstream 100 bases:
>100_bases GGGCCGACGATGACGGCTTTGGGGTAGGGACCTGCCAGTCGTTTTCGGTCATGCCGGGCGGGGTCCGCGATCCGATTGGC TCAGAGACCGAGGAATCATT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKRPLTAATPAEPGDRVRLTAEFERTQLLGILFGEFDRNLVAIENRLGVYISARGNRVQIEGEAEAAARARDVLTDLYD RIEKGQEVDAGMVDGVIAMSAQPTLDGIIRHDKDEAPPVMIRTRKKTIVPRAPSQVPYMQALARDDVIFALGPAGTGKTY LAVAQAVAQLITGSVQRLILSRPAVEAGEKLGFLPGDMKEKVDPYLRPLYDALHDCLPAEQVERRIASGEIEIAPLAFMR GRTLADAFIILDEAQNTTIPQMKMFLTRFGMNSRMVICGDPKQVDLPVPATSGLADAVARLEGLEGINVSRFTSADVVRH PIVGRIVEAYEGPGS
Sequences:
>Translated_335_residues MSKRPLTAATPAEPGDRVRLTAEFERTQLLGILFGEFDRNLVAIENRLGVYISARGNRVQIEGEAEAAARARDVLTDLYD RIEKGQEVDAGMVDGVIAMSAQPTLDGIIRHDKDEAPPVMIRTRKKTIVPRAPSQVPYMQALARDDVIFALGPAGTGKTY LAVAQAVAQLITGSVQRLILSRPAVEAGEKLGFLPGDMKEKVDPYLRPLYDALHDCLPAEQVERRIASGEIEIAPLAFMR GRTLADAFIILDEAQNTTIPQMKMFLTRFGMNSRMVICGDPKQVDLPVPATSGLADAVARLEGLEGINVSRFTSADVVRH PIVGRIVEAYEGPGS >Mature_334_residues SKRPLTAATPAEPGDRVRLTAEFERTQLLGILFGEFDRNLVAIENRLGVYISARGNRVQIEGEAEAAARARDVLTDLYDR IEKGQEVDAGMVDGVIAMSAQPTLDGIIRHDKDEAPPVMIRTRKKTIVPRAPSQVPYMQALARDDVIFALGPAGTGKTYL AVAQAVAQLITGSVQRLILSRPAVEAGEKLGFLPGDMKEKVDPYLRPLYDALHDCLPAEQVERRIASGEIEIAPLAFMRG RTLADAFIILDEAQNTTIPQMKMFLTRFGMNSRMVICGDPKQVDLPVPATSGLADAVARLEGLEGINVSRFTSADVVRHP IVGRIVEAYEGPGS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=48.7577639751553, Blast_Score=270, Evalue=8e-74, Organism=Escherichia coli, GI1787257, Length=226, Percent_Identity=44.6902654867257, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36443; Mature: 36311
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRPLTAATPAEPGDRVRLTAEFERTQLLGILFGEFDRNLVAIENRLGVYISARGNRVQ CCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEE IEGEAEAAARARDVLTDLYDRIEKGQEVDAGMVDGVIAMSAQPTLDGIIRHDKDEAPPVM EECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCHHHHHHCCCCCCCCEE IRTRKKTIVPRAPSQVPYMQALARDDVIFALGPAGTGKTYLAVAQAVAQLITGSVQRLIL EEECCCEECCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRPAVEAGEKLGFLPGDMKEKVDPYLRPLYDALHDCLPAEQVERRIASGEIEIAPLAFMR CCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHC GRTLADAFIILDEAQNTTIPQMKMFLTRFGMNSRMVICGDPKQVDLPVPATSGLADAVAR CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHHHHHHH LEGLEGINVSRFTSADVVRHPIVGRIVEAYEGPGS HHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKRPLTAATPAEPGDRVRLTAEFERTQLLGILFGEFDRNLVAIENRLGVYISARGNRVQ CCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEE IEGEAEAAARARDVLTDLYDRIEKGQEVDAGMVDGVIAMSAQPTLDGIIRHDKDEAPPVM EECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCCHHHHHHCCCCCCCCEE IRTRKKTIVPRAPSQVPYMQALARDDVIFALGPAGTGKTYLAVAQAVAQLITGSVQRLIL EEECCCEECCCCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRPAVEAGEKLGFLPGDMKEKVDPYLRPLYDALHDCLPAEQVERRIASGEIEIAPLAFMR CCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHC GRTLADAFIILDEAQNTTIPQMKMFLTRFGMNSRMVICGDPKQVDLPVPATSGLADAVAR CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCHHHHHHHH LEGLEGINVSRFTSADVVRHPIVGRIVEAYEGPGS HHCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]