| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487516
Identifier: 103487516
GI number: 103487516
Start: 2143745
End: 2144020
Strand: Direct
Name: 103487516
Synonym: Sala_2033
Alternate gene names: NA
Gene position: 2143745-2144020 (Clockwise)
Preceding gene: 103487515
Following gene: 103487522
Centisome position: 64.08
GC content: 65.22
Gene sequence:
>276_bases ATGCGCAAGATGTTCATAACCCTCGCCGCGACCTCGGCCCTCGCGCTCGGCGCCTGCCAGAGCCCGGAAGCCGACAAGGT CGAGGATCAGGCCGAAGCCCAGGCCGAAGCCATCGACGAACAGGCGGACGCCATGCCCGAAGGCCCGGCCAAGGACGCAA TGGAAAACAAGGCCGACGCCGTCGAGGAGATGGGCGAGGAAAAGGCCAACGCCATGGACGACAATGGCGAGATCGCCCCG TCCGAAACCGGCGTCGGCGACACGCAGACGAAATAA
Upstream 100 bases:
>100_bases CGACAGAAAGACGTACGATTTCCGACAATTGACAATTTTATTGCAACCCTCCCGTTCACCCGGCGTTAAGCCCAGAGTCA ACTTTGGGAGTCACTCAATT
Downstream 100 bases:
>100_bases GGGCTGCCACCCCTGACCCCCTGTTTCAGGGGTGTGACGGCCATCACCGCGATGCGTCGCGATCAGGGTTAATGCGGCGT TCGGGACGAGAGCACGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MRKMFITLAATSALALGACQSPEADKVEDQAEAQAEAIDEQADAMPEGPAKDAMENKADAVEEMGEEKANAMDDNGEIAP SETGVGDTQTK
Sequences:
>Translated_91_residues MRKMFITLAATSALALGACQSPEADKVEDQAEAQAEAIDEQADAMPEGPAKDAMENKADAVEEMGEEKANAMDDNGEIAP SETGVGDTQTK >Mature_91_residues MRKMFITLAATSALALGACQSPEADKVEDQAEAQAEAIDEQADAMPEGPAKDAMENKADAVEEMGEEKANAMDDNGEIAP SETGVGDTQTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9502; Mature: 9502
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKMFITLAATSALALGACQSPEADKVEDQAEAQAEAIDEQADAMPEGPAKDAMENKADA CCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VEEMGEEKANAMDDNGEIAPSETGVGDTQTK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKMFITLAATSALALGACQSPEADKVEDQAEAQAEAIDEQADAMPEGPAKDAMENKADA CCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VEEMGEEKANAMDDNGEIAPSETGVGDTQTK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA